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The map label for this gene is 39998021

Identifier: 39998021

GI number: 39998021

Start: 3227678

End: 3228295

Strand: Reverse

Name: 39998021

Synonym: GSU2930

Alternate gene names: NA

Gene position: 3228295-3227678 (Counterclockwise)

Preceding gene: 39998023

Following gene: 39998014

Centisome position: 84.64

GC content: 65.7

Gene sequence:

>618_bases
GTGCCGGCGGAACTGTCTCATTTTACGATTCCCGGCAGCGTCCGGGTGAAGGAGGGAAAGCGCTTGGCAGAGCGGTTCGG
CTGCCGCCGCTGCCATCGCCTGGGAGGAACGGGGACGCGCTTGGCCGCCGACCTGGACCGTCTGGTCGGCGATGACCCGG
TGAGACTCTTCGTGGCAATCCGGCAGCCGGTTCTCTTCATGCCCGACTTCCGGTTCGACGATCGCCGGGCCTCCGATGTG
GTGAATGCCATCATGGCCTTTGCCGGGGCCGCTCCCGCACAAGGGACCGCTGCCGTCCCTCTTGTCGTCCACTTCGAGGC
CGTCCGCGCGAAGGAAGACAACCTGTTCGTCACCAAGTGCGGCGGCTGCCACCGGCTCCTTACCGCCGGCGAGGGAGGGC
TGGGTGCCGGCACCGTCGCGCCGAACCTTTCCGGGCTCTTCTCCCCGTTTTACCCTACCCCCTTCAAGCCGGGCGAGCCC
TGGACCCCCGAACGTCTCGGCCGCTGGCTCGACAATCCCCGCAGCGTCCGTCCCGGCGCCCTCATGTCACCGGTACCCCT
CAACAAGGAAGAGAAGGCAAAGCTGGTTCTTTTCTTTCGCGTCAATCTCGAAAACTGA

Upstream 100 bases:

>100_bases
CTCCTGCCACCGCCCCCACCATGCGGAAAAGGGCACCTGCGTCTCCTGTCACCGGGGTAACGGCAGAAGCACGCGTCTGG
CCATCGCCCACTATCGGCTC

Downstream 100 bases:

>100_bases
AGCATTACGGCTGAACGCAAAAGGGCCGCCATGCATCGTGCACGGCGGCCCGCCACTGCGAAACGTCTGCTTGCAGACTA
CTTGACGTACTTCGCGATTT

Product: cytochrome C

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MPAELSHFTIPGSVRVKEGKRLAERFGCRRCHRLGGTGTRLAADLDRLVGDDPVRLFVAIRQPVLFMPDFRFDDRRASDV
VNAIMAFAGAAPAQGTAAVPLVVHFEAVRAKEDNLFVTKCGGCHRLLTAGEGGLGAGTVAPNLSGLFSPFYPTPFKPGEP
WTPERLGRWLDNPRSVRPGALMSPVPLNKEEKAKLVLFFRVNLEN

Sequences:

>Translated_205_residues
MPAELSHFTIPGSVRVKEGKRLAERFGCRRCHRLGGTGTRLAADLDRLVGDDPVRLFVAIRQPVLFMPDFRFDDRRASDV
VNAIMAFAGAAPAQGTAAVPLVVHFEAVRAKEDNLFVTKCGGCHRLLTAGEGGLGAGTVAPNLSGLFSPFYPTPFKPGEP
WTPERLGRWLDNPRSVRPGALMSPVPLNKEEKAKLVLFFRVNLEN
>Mature_204_residues
PAELSHFTIPGSVRVKEGKRLAERFGCRRCHRLGGTGTRLAADLDRLVGDDPVRLFVAIRQPVLFMPDFRFDDRRASDVV
NAIMAFAGAAPAQGTAAVPLVVHFEAVRAKEDNLFVTKCGGCHRLLTAGEGGLGAGTVAPNLSGLFSPFYPTPFKPGEPW
TPERLGRWLDNPRSVRPGALMSPVPLNKEEKAKLVLFFRVNLEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22390; Mature: 22259

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAELSHFTIPGSVRVKEGKRLAERFGCRRCHRLGGTGTRLAADLDRLVGDDPVRLFVAI
CCCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHEEEEEE
RQPVLFMPDFRFDDRRASDVVNAIMAFAGAAPAQGTAAVPLVVHFEAVRAKEDNLFVTKC
CCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECEEEEEEEHHHCCCCCEEEEEC
GGCHRLLTAGEGGLGAGTVAPNLSGLFSPFYPTPFKPGEPWTPERLGRWLDNPRSVRPGA
CCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
LMSPVPLNKEEKAKLVLFFRVNLEN
CCCCCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
PAELSHFTIPGSVRVKEGKRLAERFGCRRCHRLGGTGTRLAADLDRLVGDDPVRLFVAI
CCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHEEEEEE
RQPVLFMPDFRFDDRRASDVVNAIMAFAGAAPAQGTAAVPLVVHFEAVRAKEDNLFVTKC
CCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECEEEEEEEHHHCCCCCEEEEEC
GGCHRLLTAGEGGLGAGTVAPNLSGLFSPFYPTPFKPGEPWTPERLGRWLDNPRSVRPGA
CCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
LMSPVPLNKEEKAKLVLFFRVNLEN
CCCCCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA