Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is murI [H]

Identifier: 39998014

GI number: 39998014

Start: 3223038

End: 3223856

Strand: Reverse

Name: murI [H]

Synonym: GSU2923

Alternate gene names: 39998014

Gene position: 3223856-3223038 (Counterclockwise)

Preceding gene: 39998021

Following gene: 39998013

Centisome position: 84.52

GC content: 63.61

Gene sequence:

>819_bases
GTGCCCTGGAAAGCCATAGGTATTTTCGACTCGGGGGTCGGAGGACTGACCGTCCTCAAGGAGATCATCAAGGTCCTCCC
CCAGGAGGATACCATCTATTTGGGCGATACCGCCCGGGTCCCCTACGGGACCAAATCCCCTGAAACCGTCACCCGCTATA
GCCTCGAAATCGCATCGTTCCTGGTGAAGCGCGACATCAAGCTCCTGGTGGTGGCCTGCAACACCGCTTCGGCCGCTTCC
CTCGAAGCCCTCACCGAGCGGCTTCCCATCCCGGTAGTCGGCGTCATCGAGCCGGGTGCCCGCCGGGCCGTGGCCACCAC
GCGAACCGGCAAGGTCGGGGTTATCGGCACCGAGGGGACTATCCGGAGCAGTGCTTACGCCAAGGCCATCAAGCGACTTA
ATCCCGAGGTTGAGGTGATCACCCGTGCCTGTCCGCTCTTCGTTCCCCTGGCCGAAGAGGGGTGGACCGACAACGAGGTG
GCGCGCCTGACGGCCCGCACCTACCTGGCCGGTCTGCGGGAGCAGGGGGTCGACACCATCGTACTCGGCTGTACCCACTA
CCCCCTCCTCAAGAGGGTCATCGGTGAAACCGTTGGTGAAGACGTCAGGCTCGTGGATTCGGCCGAAGAGACGGCGCGCA
CCGTGGCCGACATCCTGAGAGGGCGTGACCTGCTCCGGCCGGACGGTGAGCAGGGCAATCACCACTTCTTCGTCACTGAT
GTGCCTGCCGGCTTCATTCGGGTCGGCAACCGCTTCATCGGCGGCAGGCTCGGTGATGTCTACCAGGTGAGTCTCGATGC
GGAAAAGGAGCGGCCATGA

Upstream 100 bases:

>100_bases
AGCGACGCAACAACTGAAAGCGCCGACCGTTTTCCCGGCAGGGATGCCCGTTGCCCACGGGCCGGCGATATCGGCGAGCG
TCCGCGTGCGGAGAAGAATC

Downstream 100 bases:

>100_bases
AGCGTTCCACCCCCCGTCGCCGGAGCCTTGTTCTGCTGGCGGCTTTCACCGCAGCGGCGCTGGTCATCGGTCTTCTCATG
TTCGACAAATATCGTCAGCG

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MPWKAIGIFDSGVGGLTVLKEIIKVLPQEDTIYLGDTARVPYGTKSPETVTRYSLEIASFLVKRDIKLLVVACNTASAAS
LEALTERLPIPVVGVIEPGARRAVATTRTGKVGVIGTEGTIRSSAYAKAIKRLNPEVEVITRACPLFVPLAEEGWTDNEV
ARLTARTYLAGLREQGVDTIVLGCTHYPLLKRVIGETVGEDVRLVDSAEETARTVADILRGRDLLRPDGEQGNHHFFVTD
VPAGFIRVGNRFIGGRLGDVYQVSLDAEKERP

Sequences:

>Translated_272_residues
MPWKAIGIFDSGVGGLTVLKEIIKVLPQEDTIYLGDTARVPYGTKSPETVTRYSLEIASFLVKRDIKLLVVACNTASAAS
LEALTERLPIPVVGVIEPGARRAVATTRTGKVGVIGTEGTIRSSAYAKAIKRLNPEVEVITRACPLFVPLAEEGWTDNEV
ARLTARTYLAGLREQGVDTIVLGCTHYPLLKRVIGETVGEDVRLVDSAEETARTVADILRGRDLLRPDGEQGNHHFFVTD
VPAGFIRVGNRFIGGRLGDVYQVSLDAEKERP
>Mature_271_residues
PWKAIGIFDSGVGGLTVLKEIIKVLPQEDTIYLGDTARVPYGTKSPETVTRYSLEIASFLVKRDIKLLVVACNTASAASL
EALTERLPIPVVGVIEPGARRAVATTRTGKVGVIGTEGTIRSSAYAKAIKRLNPEVEVITRACPLFVPLAEEGWTDNEVA
RLTARTYLAGLREQGVDTIVLGCTHYPLLKRVIGETVGEDVRLVDSAEETARTVADILRGRDLLRPDGEQGNHHFFVTDV
PAGFIRVGNRFIGGRLGDVYQVSLDAEKERP

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=235, Percent_Identity=37.0212765957447, Blast_Score=117, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 29521; Mature: 29390

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWKAIGIFDSGVGGLTVLKEIIKVLPQEDTIYLGDTARVPYGTKSPETVTRYSLEIASF
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
LVKRDIKLLVVACNTASAASLEALTERLPIPVVGVIEPGARRAVATTRTGKVGVIGTEGT
HHHCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCEEEEECCCC
IRSSAYAKAIKRLNPEVEVITRACPLFVPLAEEGWTDNEVARLTARTYLAGLREQGVDTI
CHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
VLGCTHYPLLKRVIGETVGEDVRLVDSAEETARTVADILRGRDLLRPDGEQGNHHFFVTD
EEECCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE
VPAGFIRVGNRFIGGRLGDVYQVSLDAEKERP
CCHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
PWKAIGIFDSGVGGLTVLKEIIKVLPQEDTIYLGDTARVPYGTKSPETVTRYSLEIASF
CCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
LVKRDIKLLVVACNTASAASLEALTERLPIPVVGVIEPGARRAVATTRTGKVGVIGTEGT
HHHCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCEEEEECCCC
IRSSAYAKAIKRLNPEVEVITRACPLFVPLAEEGWTDNEVARLTARTYLAGLREQGVDTI
CHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
VLGCTHYPLLKRVIGETVGEDVRLVDSAEETARTVADILRGRDLLRPDGEQGNHHFFVTD
EEECCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE
VPAGFIRVGNRFIGGRLGDVYQVSLDAEKERP
CCHHHHHHCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA