| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is zraS [H]
Identifier: 39998007
GI number: 39998007
Start: 3215428
End: 3216891
Strand: Reverse
Name: zraS [H]
Synonym: GSU2916
Alternate gene names: 39998007
Gene position: 3216891-3215428 (Counterclockwise)
Preceding gene: 39998008
Following gene: 39998006
Centisome position: 84.34
GC content: 59.9
Gene sequence:
>1464_bases GTGATAATCATCCTGGTCGGCCTGCTTTCCGTGGGGATCGGTACCTTTACCTATCTTAACTTCAAGCGGGAGAAGCGCCA GCTGATCGCGGCGGCCCGCGAGAATACACTCCTGCTCCTCAATACCATTGAGCGGAGCATCTATCGTTCCATGAGCATCG GCGATACCCAGGACGTCCAGCGCATGCTGGAGATGGTCGGCAAGAGCCACTCTAAGCTCCTGGGGGTGCGGATATTCCAT CCCCAGGGGGTTGTCCTCAAGTCGTCGCTCCCCTCTGAGATGGGCGGAACGGTGCCGGACGGAGACTACCAGCTCTTTGC CAACAATCTGCGGGAAGGGATCTTCGCCAGCGGCAGCCACGGTGAAGTCTTCGGCATGATCAAGCCGATCTACAACGAGG AGCAGTGCCACATCTGCCACGGTCGCAAGCGGCGGGTCATCGGAGTGCTCAACGTCAACTACTCCCTGGCGGATACCAAT CGGCGCATCAACGAGGCGACCCGTCTCTTCCTCTTCTCCACCGGCGCCATCATCCTTTTTAGCGCGGCTGCTGTTTCTCT CGTCATGGTGCGTTTCGTGAGGCAGCCGCTCAATCGTATCGTGGAGAGCATGGCCCGGGTGGAGCAGGGCGATCTGAAGG TCAGGATGGTCAACGGCGGCCGGGATGAGATCGGTCGGCTCATAACCAGTTTTGACTCCATGGTCGACAAGCTCGACAAG GCCAAGCAAGAGCTGGAGCAGTATCACTTCCAGCAGATGGAGCGGGCCGACCGGCTTGCGTCCGTGGGAGAAATGGCCGC TGGTATCGCCCATGAGATCAAGAACCCGCTGGCCGGGATATCCGCAGCAATGACCATCATCCGCCAGGATTTCCAGGAGG AGGATCCCCGCCGGGAAATCATCGGCGAGGTAATCGAGCAGGTCAACCGTCTGGACAAGACGGTCAACGATCTTCTCTTC TTCGGCAAGCCGACCCATCCGGAGCCCGCTCCCACCGATCTGAACGATGTCTTGCGCAAGACCCTGCTCTTTGCCCTTCA GCACAAAGGCGGGAAGAACATCGAGAAACGGTTGGAGTTGCAGGAGCCGCTCCCCCTCGTTTTCGTGGACCCCAAGCAGG TGCAGCAGGTGGTGCTCAACCTGATCCTGAACGCCATCCAGGCCATGCAGGAGACCGGTGGCACCCTCACCGTTGCCAGC CGTATCGCGGAGCGCGAGGGAGGTTTGTGGGTCCGCGTGGAGGTGGCCGATACGGGGCCGGGTATTCCCGAGCCGATCAT CAGCAAAATCTTCACTCCGTTTTTCACCACCAAGGCCCAGGGGACGGGGCTTGGCCTGGCCATTTGCCAGAAGCTCATCA CGCAGCACGGCGGAACCCTCCATGTCTCGAGTGTGCTTAACCAGGGCACGGTTTTTTCCATCGACCTCCCCATGACCGAA CTGGAGGCCGACGGTGCCGTATGA
Upstream 100 bases:
>100_bases ACGCTGATGTTTTTCTCGCTACTTACATTACCCGGCGGCTGTTCTTCGTGAACAGCCGGCCCATGGGGGCAGGTTGGTAT TCAGAAGCCTCACAACACGT
Downstream 100 bases:
>100_bases GGAATGGCCGGCGCGGGAAGAGCGCTGTGTGCATCAAAGGATTTCCCTATCTGCTGCCGGTAATGCTATAGTGGGTTCAT TATACGATTCAATGCGTTAA
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MIIILVGLLSVGIGTFTYLNFKREKRQLIAAARENTLLLLNTIERSIYRSMSIGDTQDVQRMLEMVGKSHSKLLGVRIFH PQGVVLKSSLPSEMGGTVPDGDYQLFANNLREGIFASGSHGEVFGMIKPIYNEEQCHICHGRKRRVIGVLNVNYSLADTN RRINEATRLFLFSTGAIILFSAAAVSLVMVRFVRQPLNRIVESMARVEQGDLKVRMVNGGRDEIGRLITSFDSMVDKLDK AKQELEQYHFQQMERADRLASVGEMAAGIAHEIKNPLAGISAAMTIIRQDFQEEDPRREIIGEVIEQVNRLDKTVNDLLF FGKPTHPEPAPTDLNDVLRKTLLFALQHKGGKNIEKRLELQEPLPLVFVDPKQVQQVVLNLILNAIQAMQETGGTLTVAS RIAEREGGLWVRVEVADTGPGIPEPIISKIFTPFFTTKAQGTGLGLAICQKLITQHGGTLHVSSVLNQGTVFSIDLPMTE LEADGAV
Sequences:
>Translated_487_residues MIIILVGLLSVGIGTFTYLNFKREKRQLIAAARENTLLLLNTIERSIYRSMSIGDTQDVQRMLEMVGKSHSKLLGVRIFH PQGVVLKSSLPSEMGGTVPDGDYQLFANNLREGIFASGSHGEVFGMIKPIYNEEQCHICHGRKRRVIGVLNVNYSLADTN RRINEATRLFLFSTGAIILFSAAAVSLVMVRFVRQPLNRIVESMARVEQGDLKVRMVNGGRDEIGRLITSFDSMVDKLDK AKQELEQYHFQQMERADRLASVGEMAAGIAHEIKNPLAGISAAMTIIRQDFQEEDPRREIIGEVIEQVNRLDKTVNDLLF FGKPTHPEPAPTDLNDVLRKTLLFALQHKGGKNIEKRLELQEPLPLVFVDPKQVQQVVLNLILNAIQAMQETGGTLTVAS RIAEREGGLWVRVEVADTGPGIPEPIISKIFTPFFTTKAQGTGLGLAICQKLITQHGGTLHVSSVLNQGTVFSIDLPMTE LEADGAV >Mature_487_residues MIIILVGLLSVGIGTFTYLNFKREKRQLIAAARENTLLLLNTIERSIYRSMSIGDTQDVQRMLEMVGKSHSKLLGVRIFH PQGVVLKSSLPSEMGGTVPDGDYQLFANNLREGIFASGSHGEVFGMIKPIYNEEQCHICHGRKRRVIGVLNVNYSLADTN RRINEATRLFLFSTGAIILFSAAAVSLVMVRFVRQPLNRIVESMARVEQGDLKVRMVNGGRDEIGRLITSFDSMVDKLDK AKQELEQYHFQQMERADRLASVGEMAAGIAHEIKNPLAGISAAMTIIRQDFQEEDPRREIIGEVIEQVNRLDKTVNDLLF FGKPTHPEPAPTDLNDVLRKTLLFALQHKGGKNIEKRLELQEPLPLVFVDPKQVQQVVLNLILNAIQAMQETGGTLTVAS RIAEREGGLWVRVEVADTGPGIPEPIISKIFTPFFTTKAQGTGLGLAICQKLITQHGGTLHVSSVLNQGTVFSIDLPMTE LEADGAV
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=231, Percent_Identity=37.6623376623377, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1788549, Length=229, Percent_Identity=34.061135371179, Blast_Score=142, Evalue=6e-35, Organism=Escherichia coli, GI1790300, Length=236, Percent_Identity=32.6271186440678, Blast_Score=105, Evalue=8e-24, Organism=Escherichia coli, GI1789149, Length=341, Percent_Identity=27.5659824046921, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI87081816, Length=320, Percent_Identity=29.0625, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1788393, Length=300, Percent_Identity=26.3333333333333, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI145693157, Length=260, Percent_Identity=28.4615384615385, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1786783, Length=342, Percent_Identity=23.3918128654971, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI48994928, Length=256, Percent_Identity=28.125, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1790861, Length=345, Percent_Identity=25.7971014492754, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1786912, Length=285, Percent_Identity=27.719298245614, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1786600, Length=229, Percent_Identity=25.3275109170306, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1789808, Length=320, Percent_Identity=24.6875, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53941; Mature: 53941
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIILVGLLSVGIGTFTYLNFKREKRQLIAAARENTLLLLNTIERSIYRSMSIGDTQDVQ CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCHHHHH RMLEMVGKSHSKLLGVRIFHPQGVVLKSSLPSEMGGTVPDGDYQLFANNLREGIFASGSH HHHHHHCCCCHHEEEEEEECCCCEEEECCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCC GEVFGMIKPIYNEEQCHICHGRKRRVIGVLNVNYSLADTNRRINEATRLFLFSTGAIILF CCEEEECCCCCCCCCEEEECCCCCEEEEEEECCEEECCCHHHHHHHHEEHHEECCHHHHH SAAAVSLVMVRFVRQPLNRIVESMARVEQGDLKVRMVNGGRDEIGRLITSFDSMVDKLDK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH AKQELEQYHFQQMERADRLASVGEMAAGIAHEIKNPLAGISAAMTIIRQDFQEEDPRREI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHH IGEVIEQVNRLDKTVNDLLFFGKPTHPEPAPTDLNDVLRKTLLFALQHKGGKNIEKRLEL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH QEPLPLVFVDPKQVQQVVLNLILNAIQAMQETGGTLTVASRIAEREGGLWVRVEVADTGP CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCEEEEEEEECCCC GIPEPIISKIFTPFFTTKAQGTGLGLAICQKLITQHGGTLHVSSVLNQGTVFSIDLPMTE CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHCCCCEEEEECCHHH LEADGAV CCCCCCC >Mature Secondary Structure MIIILVGLLSVGIGTFTYLNFKREKRQLIAAARENTLLLLNTIERSIYRSMSIGDTQDVQ CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCHHHHH RMLEMVGKSHSKLLGVRIFHPQGVVLKSSLPSEMGGTVPDGDYQLFANNLREGIFASGSH HHHHHHCCCCHHEEEEEEECCCCEEEECCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCC GEVFGMIKPIYNEEQCHICHGRKRRVIGVLNVNYSLADTNRRINEATRLFLFSTGAIILF CCEEEECCCCCCCCCEEEECCCCCEEEEEEECCEEECCCHHHHHHHHEEHHEECCHHHHH SAAAVSLVMVRFVRQPLNRIVESMARVEQGDLKVRMVNGGRDEIGRLITSFDSMVDKLDK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH AKQELEQYHFQQMERADRLASVGEMAAGIAHEIKNPLAGISAAMTIIRQDFQEEDPRREI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHH IGEVIEQVNRLDKTVNDLLFFGKPTHPEPAPTDLNDVLRKTLLFALQHKGGKNIEKRLEL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH QEPLPLVFVDPKQVQQVVLNLILNAIQAMQETGGTLTVASRIAEREGGLWVRVEVADTGP CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCEEEEEEEECCCC GIPEPIISKIFTPFFTTKAQGTGLGLAICQKLITQHGGTLHVSSVLNQGTVFSIDLPMTE CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHCCCCEEEEECCHHH LEADGAV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]