Click here to switch to the map view.

The map label for this gene is 39997973

Identifier: 39997973

GI number: 39997973

Start: 3157976

End: 3160042

Strand: Reverse

Name: 39997973

Synonym: GSU2882

Alternate gene names: NA

Gene position: 3160042-3157976 (Counterclockwise)

Preceding gene: 39997974

Following gene: 39997971

Centisome position: 82.85

GC content: 67.1

Gene sequence:

>2067_bases
ATGCTTGCCGTCGGCCTGGCGGACACGGCGGCTGCGGCCTCCACCTGCAGCGACTGCCACGGCATGCCTCCCATAGACGC
GGCCTATCGCAACATCACTACCGGCGGGTTCAAGGGGAGCCATCAGACCCATCAGCCCGCAACAGCCCCGGCGGGAGCCT
GCGCCGTCTGCCACACCGGCAGCGGGTCCTACGCCATGGACCACATGAACGGCACCATCGAGATGGCGTCGAACATCAAT
GCATCGCCTCTGGCAGCAACCTACGGCAAGGGGGTCTTCTTCAACCAGACCTCCAACCCGGTCATGGGGACCTGCTCCAA
CGTCAACTGCCATTTCGAGAAGACCACCCCTGTCTGGAGCAGCGGTCCCCTCACCGTGCCCGCCGGTTGTTCCATCTGCC
ATGGGCTTCCCCCTGCCGATGGGAGCCATCCTGCGGCCACGGCAGGCTCCGGCAGGAAGCATGGTGACTACTACGGTACC
GGCACCGGTTCCTGCGTGAAATGTCACCCGGACCATGCGGCGGCGGCCAAGCCCTTTGCCCATGCCTCCAGCGCCGGCAA
CCGCGGGTTGATCCTCCGTTTTACCGCGGCACCCAATACGGCGGGAACCTACTCTAAGACCGCCAACCTGAACTATCCCA
ATTACCTGCCGAGCCAGACCACCGCCGCCAACCGCAACGGCACCTGCACGGCCATGTACTGCCACAGCGACGGCAACGGC
GGCGCAGCCAGGGCCACCGCCACCTGGGGCGGGACGCTTGCTGCCGACTGTACCGGCTGCCACGGGGGCAACGCCGCTTC
GGCCGCTCCCATCATCACCGGGCTCCACGCCCAGCACGTGAACGCCGCAGCGGTCCTCGGAACCACCATCGAATGCGCCC
GCTGCCACAACGGACCGGTCAGCGCCGGCAATGACCGTGCGGTTACCGGTGTGGCTGCCCACGTTGACGGCGTCAAAACG
GTCGCCTTTGTGGGGGGCGGCACCTGGAATGCCACCGCCAAAACCTGTTCCGCCACTACCTGTCACTCCTCGGGCAAGGC
CACGGCTCCCCAGCCGCCAACCCCCGCTTGGACCGGTGCGGCCATGGGGTGCAACGGCTGCCACGGGACCTTGAACCCAC
TCGGTACCCCCGACTACGCCAGCGGCGGCTCCGGTACGGCCCTGGCCAACAGCCACGCCAAGCACGTGGCCGCGGCCGCC
GACTGTGCCCTCTGCCACGCGAACACCACGACCACGGGCACCGCCATCAAGGCCGGATCGACGCTCCACACCAATGGAGC
CATTGATGTGAACCTGGACACCACCAATGCTCGGGTGGGGGCCACGGCCACCTGGACAGCCGGAACCAAGACCTGCGCCA
CTGTTTACTGCCACGGCGCAACCCTCACGGGCGGCACCACAAAGAGCCCCGTATGGGGAGCGACTCTCACCGGTTGCGGC
ACTTGCCACGGCTTCCCGCCGGCAACTTCCGTTCATACAGGCAAGGTGGCCACCGACTGCACCGGCTGTCACCCCCACGT
GAACGCCTCGGGCACCGGCTTCACCGACGCATCGAAGCATATCAACGGAGTTGTGGAGGCTTCGGGCGGCCACGCGGTTC
CTTACTACACCCACAAGTCGCCGGCCCCCACCACGGCCCAGTGTTCGGGCTGCCACGCCAATGCCAGCGCAACTGCCCCC
TATCCGGCCGGGACGTCTCCCAACTATACGGCGCCAGACTGCCGTTCGTGCCATGTGGTGAAGAGCCCCTACGGCGTTGC
CGACTGCTCTTCCTGCCACGGCACCGCCGGCGCTACCGGCGTCAATCTGGGGCGCCCAACCGGCTCCACGTTCCCGAACA
TCGCCGGCCAGCACGGCAAGTCGGACCACCGGGTGGCCTGCAGCACCTGTCACGGAACCTACGGCACCGGACGTACCGAC
GGCACCCACGGGCCGGGCAACCACACGCCGTCGACCGTCTCTACCCGGGCCACCAAGGTCAACGTGACGCTGTCCACCTG
GAACCCCACCACCCGCACCTGCGGGACGGTCTGCAGCTACAACCACGGTTCGAAGACCTGGTACTGA

Upstream 100 bases:

>100_bases
GTTTCAGTTCCGTTCTGCCGGAAAGGGAAAGACGATGGCGATCGATACAACGAGCGACAGGAAAGGGGTGGGCAGCGCGT
TTGTCGGGGCACTGGCCCTG

Downstream 100 bases:

>100_bases
CAATGCGTTGGAGCGTAGTTTCGCGGGGAGGACCGAGTCAGGCAGTCCTCCCCGCGAAACCGCCTTGCGACGGACGGCCA
ACGGCGGTAAGCTGAAGCGA

Product: cytochrome C

Products: NA

Alternate protein names: Cytochrome C; High-Molecular-Weight Cytochrome C

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MLAVGLADTAAAASTCSDCHGMPPIDAAYRNITTGGFKGSHQTHQPATAPAGACAVCHTGSGSYAMDHMNGTIEMASNIN
ASPLAATYGKGVFFNQTSNPVMGTCSNVNCHFEKTTPVWSSGPLTVPAGCSICHGLPPADGSHPAATAGSGRKHGDYYGT
GTGSCVKCHPDHAAAAKPFAHASSAGNRGLILRFTAAPNTAGTYSKTANLNYPNYLPSQTTAANRNGTCTAMYCHSDGNG
GAARATATWGGTLAADCTGCHGGNAASAAPIITGLHAQHVNAAAVLGTTIECARCHNGPVSAGNDRAVTGVAAHVDGVKT
VAFVGGGTWNATAKTCSATTCHSSGKATAPQPPTPAWTGAAMGCNGCHGTLNPLGTPDYASGGSGTALANSHAKHVAAAA
DCALCHANTTTTGTAIKAGSTLHTNGAIDVNLDTTNARVGATATWTAGTKTCATVYCHGATLTGGTTKSPVWGATLTGCG
TCHGFPPATSVHTGKVATDCTGCHPHVNASGTGFTDASKHINGVVEASGGHAVPYYTHKSPAPTTAQCSGCHANASATAP
YPAGTSPNYTAPDCRSCHVVKSPYGVADCSSCHGTAGATGVNLGRPTGSTFPNIAGQHGKSDHRVACSTCHGTYGTGRTD
GTHGPGNHTPSTVSTRATKVNVTLSTWNPTTRTCGTVCSYNHGSKTWY

Sequences:

>Translated_688_residues
MLAVGLADTAAAASTCSDCHGMPPIDAAYRNITTGGFKGSHQTHQPATAPAGACAVCHTGSGSYAMDHMNGTIEMASNIN
ASPLAATYGKGVFFNQTSNPVMGTCSNVNCHFEKTTPVWSSGPLTVPAGCSICHGLPPADGSHPAATAGSGRKHGDYYGT
GTGSCVKCHPDHAAAAKPFAHASSAGNRGLILRFTAAPNTAGTYSKTANLNYPNYLPSQTTAANRNGTCTAMYCHSDGNG
GAARATATWGGTLAADCTGCHGGNAASAAPIITGLHAQHVNAAAVLGTTIECARCHNGPVSAGNDRAVTGVAAHVDGVKT
VAFVGGGTWNATAKTCSATTCHSSGKATAPQPPTPAWTGAAMGCNGCHGTLNPLGTPDYASGGSGTALANSHAKHVAAAA
DCALCHANTTTTGTAIKAGSTLHTNGAIDVNLDTTNARVGATATWTAGTKTCATVYCHGATLTGGTTKSPVWGATLTGCG
TCHGFPPATSVHTGKVATDCTGCHPHVNASGTGFTDASKHINGVVEASGGHAVPYYTHKSPAPTTAQCSGCHANASATAP
YPAGTSPNYTAPDCRSCHVVKSPYGVADCSSCHGTAGATGVNLGRPTGSTFPNIAGQHGKSDHRVACSTCHGTYGTGRTD
GTHGPGNHTPSTVSTRATKVNVTLSTWNPTTRTCGTVCSYNHGSKTWY
>Mature_688_residues
MLAVGLADTAAAASTCSDCHGMPPIDAAYRNITTGGFKGSHQTHQPATAPAGACAVCHTGSGSYAMDHMNGTIEMASNIN
ASPLAATYGKGVFFNQTSNPVMGTCSNVNCHFEKTTPVWSSGPLTVPAGCSICHGLPPADGSHPAATAGSGRKHGDYYGT
GTGSCVKCHPDHAAAAKPFAHASSAGNRGLILRFTAAPNTAGTYSKTANLNYPNYLPSQTTAANRNGTCTAMYCHSDGNG
GAARATATWGGTLAADCTGCHGGNAASAAPIITGLHAQHVNAAAVLGTTIECARCHNGPVSAGNDRAVTGVAAHVDGVKT
VAFVGGGTWNATAKTCSATTCHSSGKATAPQPPTPAWTGAAMGCNGCHGTLNPLGTPDYASGGSGTALANSHAKHVAAAA
DCALCHANTTTTGTAIKAGSTLHTNGAIDVNLDTTNARVGATATWTAGTKTCATVYCHGATLTGGTTKSPVWGATLTGCG
TCHGFPPATSVHTGKVATDCTGCHPHVNASGTGFTDASKHINGVVEASGGHAVPYYTHKSPAPTTAQCSGCHANASATAP
YPAGTSPNYTAPDCRSCHVVKSPYGVADCSSCHGTAGATGVNLGRPTGSTFPNIAGQHGKSDHRVACSTCHGTYGTGRTD
GTHGPGNHTPSTVSTRATKVNVTLSTWNPTTRTCGTVCSYNHGSKTWY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68612; Mature: 68612

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS51007 CYTC ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVGLADTAAAASTCSDCHGMPPIDAAYRNITTGGFKGSHQTHQPATAPAGACAVCHTG
CEEEECCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
SGSYAMDHMNGTIEMASNINASPLAATYGKGVFFNQTSNPVMGTCSNVNCHFEKTTPVWS
CCCEEEECCCCEEEECCCCCCCCCCHHCCCCEEEECCCCCCEEEECCCEEEEEECCCCCC
SGPLTVPAGCSICHGLPPADGSHPAATAGSGRKHGDYYGTGTGSCVKCHPDHAAAAKPFA
CCCEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHCCCCH
HASSAGNRGLILRFTAAPNTAGTYSKTANLNYPNYLPSQTTAANRNGTCTAMYCHSDGNG
HCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
GAARATATWGGTLAADCTGCHGGNAASAAPIITGLHAQHVNAAAVLGTTIECARCHNGPV
CEEEEEEECCCEEEECCCCCCCCCCCCCCCEEECCCHHCCCEEEECCCEEEEECCCCCCC
SAGNDRAVTGVAAHVDGVKTVAFVGGGTWNATAKTCSATTCHSSGKATAPQPPTPAWTGA
CCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
AMGCNGCHGTLNPLGTPDYASGGSGTALANSHAKHVAAAADCALCHANTTTTGTAIKAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHCEEEEECCCCCCCCEEECCC
TLHTNGAIDVNLDTTNARVGATATWTAGTKTCATVYCHGATLTGGTTKSPVWGATLTGCG
EEECCCEEEEEEECCCCEECCEEEECCCCCEEEEEEEECEEECCCCCCCCCCCCEECCCC
TCHGFPPATSVHTGKVATDCTGCHPHVNASGTGFTDASKHINGVVEASGGHAVPYYTHKS
CCCCCCCCCCEECCCEECCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCEECCEEECCC
PAPTTAQCSGCHANASATAPYPAGTSPNYTAPDCRSCHVVKSPYGVADCSSCHGTAGATG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
VNLGRPTGSTFPNIAGQHGKSDHRVACSTCHGTYGTGRTDGTHGPGNHTPSTVSTRATKV
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
NVTLSTWNPTTRTCGTVCSYNHGSKTWY
EEEEECCCCCCHHHHCEEECCCCCCCCC
>Mature Secondary Structure
MLAVGLADTAAAASTCSDCHGMPPIDAAYRNITTGGFKGSHQTHQPATAPAGACAVCHTG
CEEEECCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
SGSYAMDHMNGTIEMASNINASPLAATYGKGVFFNQTSNPVMGTCSNVNCHFEKTTPVWS
CCCEEEECCCCEEEECCCCCCCCCCHHCCCCEEEECCCCCCEEEECCCEEEEEECCCCCC
SGPLTVPAGCSICHGLPPADGSHPAATAGSGRKHGDYYGTGTGSCVKCHPDHAAAAKPFA
CCCEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHCCCCH
HASSAGNRGLILRFTAAPNTAGTYSKTANLNYPNYLPSQTTAANRNGTCTAMYCHSDGNG
HCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
GAARATATWGGTLAADCTGCHGGNAASAAPIITGLHAQHVNAAAVLGTTIECARCHNGPV
CEEEEEEECCCEEEECCCCCCCCCCCCCCCEEECCCHHCCCEEEECCCEEEEECCCCCCC
SAGNDRAVTGVAAHVDGVKTVAFVGGGTWNATAKTCSATTCHSSGKATAPQPPTPAWTGA
CCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
AMGCNGCHGTLNPLGTPDYASGGSGTALANSHAKHVAAAADCALCHANTTTTGTAIKAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHCEEEEECCCCCCCCEEECCC
TLHTNGAIDVNLDTTNARVGATATWTAGTKTCATVYCHGATLTGGTTKSPVWGATLTGCG
EEECCCEEEEEEECCCCEECCEEEECCCCCEEEEEEEECEEECCCCCCCCCCCCEECCCC
TCHGFPPATSVHTGKVATDCTGCHPHVNASGTGFTDASKHINGVVEASGGHAVPYYTHKS
CCCCCCCCCCEECCCEECCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCEECCEEECCC
PAPTTAQCSGCHANASATAPYPAGTSPNYTAPDCRSCHVVKSPYGVADCSSCHGTAGATG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
VNLGRPTGSTFPNIAGQHGKSDHRVACSTCHGTYGTGRTDGTHGPGNHTPSTVSTRATKV
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
NVTLSTWNPTTRTCGTVCSYNHGSKTWY
EEEEECCCCCCHHHHCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA