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The map label for this gene is ccsA [H]

Identifier: 39997971

GI number: 39997971

Start: 3155698

End: 3156531

Strand: Reverse

Name: ccsA [H]

Synonym: GSU2880

Alternate gene names: 39997971

Gene position: 3156531-3155698 (Counterclockwise)

Preceding gene: 39997973

Following gene: 39997970

Centisome position: 82.76

GC content: 60.91

Gene sequence:

>834_bases
ATGACACCGACACCTTCATTCGCCGCCTACGTGGGGGCCCACTGGGCCGCCGTCGTCATCTACGTTATCGCCACCGTCGT
CAATGTCTACGGCCTGCTCTTCAGGAGCGAGCCGGCCGAGCGGTGGAGCTATCGCCTGATCTCCGTCGGGTGGATGATCC
ATAGCGTTGTCATCGCCTATTGGTGGTGGGTGACGGGGCACGGTCCCTACCTCTCCCGCAATGAGGTCCTCTCCTCCGAC
GCCTGGATCGCCCTCACGGTTTTCATGTGCTTCCAGCGCCTCTATCCACGGGTCCGTCCGGCCAGTATCGTGGTCTTCCC
GTCCGTCTTCCTGATGATCGCCCTGGGTCTTTTCTTCGATGTCCAGATCCGCACGCTTCCCCCCACCTTCAGCGGCATCT
GGCTCGTGATCCACATTGCCTTCTACAAGATCGCCCTCGGCACCATCCTCATCGCACTGGCCTGCTCCATCTTTCTTGTC
CTTAAAAAGCGTACCCCCTTTGCCTGGCTCCAGCGGCTCCCGGACCTGGAGAGCCTGGATCTCCACGCCTACCGCTTCGC
CGGCTTCGGCTTCATCATCTGGGCCATCGCCATGCTGGCCGGCAGCATCTGGGCCTACAAATCGTGGGGACGGTTCTGGG
GGTGGGACCCGGTGGAAAACTGGTCCCTCATTACCTGGATCCTCTTCGGCATCCACCTCCACCTCCGCCGCTTCTTCCGC
TGGAGCGGCGAGCGGGCCGCCTTGTTTTACGTGGTCTGTTTCATTTTCTCCCTGGTGGCGCTCTTCTACACGTCGCACAT
GGATACCTCGATCCACATGGAATACTTCCGGTAG

Upstream 100 bases:

>100_bases
CCGGCTGGCGCGTTGCCTGGCGGACGACCCGGTTCGGCGATTTCTACCGGGATGAAGGCGAGGCCCTGCTCAGGGAACTG
GAAGGAAAGGGGCAGTTCTG

Downstream 100 bases:

>100_bases
CGGTGTCGGGCCCCTTTTCGGATTTCCGGATTTTTGTTGACAACCATTTGTATTCACCAATAGAATTGAGAACTTTTGGA
ATTTTTACTGCAAGAAGGGG

Product: CcmF/CcyK/CcsA family cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTPTPSFAAYVGAHWAAVVIYVIATVVNVYGLLFRSEPAERWSYRLISVGWMIHSVVIAYWWWVTGHGPYLSRNEVLSSD
AWIALTVFMCFQRLYPRVRPASIVVFPSVFLMIALGLFFDVQIRTLPPTFSGIWLVIHIAFYKIALGTILIALACSIFLV
LKKRTPFAWLQRLPDLESLDLHAYRFAGFGFIIWAIAMLAGSIWAYKSWGRFWGWDPVENWSLITWILFGIHLHLRRFFR
WSGERAALFYVVCFIFSLVALFYTSHMDTSIHMEYFR

Sequences:

>Translated_277_residues
MTPTPSFAAYVGAHWAAVVIYVIATVVNVYGLLFRSEPAERWSYRLISVGWMIHSVVIAYWWWVTGHGPYLSRNEVLSSD
AWIALTVFMCFQRLYPRVRPASIVVFPSVFLMIALGLFFDVQIRTLPPTFSGIWLVIHIAFYKIALGTILIALACSIFLV
LKKRTPFAWLQRLPDLESLDLHAYRFAGFGFIIWAIAMLAGSIWAYKSWGRFWGWDPVENWSLITWILFGIHLHLRRFFR
WSGERAALFYVVCFIFSLVALFYTSHMDTSIHMEYFR
>Mature_276_residues
TPTPSFAAYVGAHWAAVVIYVIATVVNVYGLLFRSEPAERWSYRLISVGWMIHSVVIAYWWWVTGHGPYLSRNEVLSSDA
WIALTVFMCFQRLYPRVRPASIVVFPSVFLMIALGLFFDVQIRTLPPTFSGIWLVIHIAFYKIALGTILIALACSIFLVL
KKRTPFAWLQRLPDLESLDLHAYRFAGFGFIIWAIAMLAGSIWAYKSWGRFWGWDPVENWSLITWILFGIHLHLRRFFRW
SGERAALFYVVCFIFSLVALFYTSHMDTSIHMEYFR

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 32215; Mature: 32084

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTPSFAAYVGAHWAAVVIYVIATVVNVYGLLFRSEPAERWSYRLISVGWMIHSVVIAY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
WWWVTGHGPYLSRNEVLSSDAWIALTVFMCFQRLYPRVRPASIVVFPSVFLMIALGLFFD
HHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHH
VQIRTLPPTFSGIWLVIHIAFYKIALGTILIALACSIFLVLKKRTPFAWLQRLPDLESLD
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
LHAYRFAGFGFIIWAIAMLAGSIWAYKSWGRFWGWDPVENWSLITWILFGIHLHLRRFFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WSGERAALFYVVCFIFSLVALFYTSHMDTSIHMEYFR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHEECC
>Mature Secondary Structure 
TPTPSFAAYVGAHWAAVVIYVIATVVNVYGLLFRSEPAERWSYRLISVGWMIHSVVIAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
WWWVTGHGPYLSRNEVLSSDAWIALTVFMCFQRLYPRVRPASIVVFPSVFLMIALGLFFD
HHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHH
VQIRTLPPTFSGIWLVIHIAFYKIALGTILIALACSIFLVLKKRTPFAWLQRLPDLESLD
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
LHAYRFAGFGFIIWAIAMLAGSIWAYKSWGRFWGWDPVENWSLITWILFGIHLHLRRFFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WSGERAALFYVVCFIFSLVALFYTSHMDTSIHMEYFR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA