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The map label for this gene is yeiE [H]

Identifier: 39997910

GI number: 39997910

Start: 3098717

End: 3099607

Strand: Reverse

Name: yeiE [H]

Synonym: GSU2817

Alternate gene names: 39997910

Gene position: 3099607-3098717 (Counterclockwise)

Preceding gene: 39997912

Following gene: 39997909

Centisome position: 81.27

GC content: 54.99

Gene sequence:

>891_bases
ATGGCGATTAGTCTGAGGCAGCTGGAAATATTCGAAAAAGTTGCACAATGCGAGCATGTAACACAGGCAAGCACTCAACT
CTTTCTGACTCAATCGGCCGTGAGCATGGCTATCGCCGAATTGGAGCGAGTGGCGGGGGCTCCGCTTTTCGAGAGGCGCG
GCAAGCGGCTGCTCCTGAATGACCGCGGCCGGAAAATACTGCCTGAAGCAGAAGAGGTGGTCAGGAGAACCCGGGCGATA
GAGCAGTTTTTGGAAGATTCCGCCGGCGAGCCAAGGGGGGTCCTGAATGTCGGCGCAAGCACCACGATCGGCAACTATAT
CCTGCCTGAGCTGATTGCCGAATTTTCGGGGAACTATCCCGATGCAAAGGTATTGCTTACTATCGGAAATGCCCACCAGA
TAGAGCACGCATTGGAAAAGGGAGAACTTGATCTCGGCTTGATCGAAGGGATTCCGCATTCCGGCGTTCTTGACTCCACT
CCCTGGAAAAAAGATGAGCTCGTTGTCGTGGTCGGCAAAGGGCACCCATGGGCATGCGATGGCGCAGCGTCGGTGGAGAT
GCTGGGAAATGCCCCGTGGATCATGCGTGAAACGGGCTCCGGGACAAGGGAGGTTTTTGAGGGCGCGATGGCGGGGAAAG
GCATCTCCTTCTCGATCAGCCTGGAATTAGGGCATACCGAGGCGATCAAGAAAGCAATTGAGGCGGGGCTGGGGGTAGGC
TGCCTTTCGAGGATTGCCGTTAACAGGGAACTGGAACATGGTTGGCTGGTTGAAATTGCGTGTCCGCTGGATTTGAAAAG
AACCCTGTCACTCCAGACCAGGCAATCCGGGTACAAGACCAGATTGCTGTGCGCGTTTTGGTCGCTACTGAATCGGCATA
AGGATATATAG

Upstream 100 bases:

>100_bases
CCTTTCTGCATCTATTTAGTTGCATCATAGACCACCTTGAATATAATAAAAAATGAGTAATAAAAATTATTATGATCAGT
ATTATTTATAAGGGAAGACG

Downstream 100 bases:

>100_bases
CCATGTCTGCGGTTTAGGTGTAGAATTCAGTTGCCTTTCGGCCTGAACCAAAGCTCCAATGCAGTGCCCGAAAGACCCGA
ACAGGCAGATTGTGGAGGGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MAISLRQLEIFEKVAQCEHVTQASTQLFLTQSAVSMAIAELERVAGAPLFERRGKRLLLNDRGRKILPEAEEVVRRTRAI
EQFLEDSAGEPRGVLNVGASTTIGNYILPELIAEFSGNYPDAKVLLTIGNAHQIEHALEKGELDLGLIEGIPHSGVLDST
PWKKDELVVVVGKGHPWACDGAASVEMLGNAPWIMRETGSGTREVFEGAMAGKGISFSISLELGHTEAIKKAIEAGLGVG
CLSRIAVNRELEHGWLVEIACPLDLKRTLSLQTRQSGYKTRLLCAFWSLLNRHKDI

Sequences:

>Translated_296_residues
MAISLRQLEIFEKVAQCEHVTQASTQLFLTQSAVSMAIAELERVAGAPLFERRGKRLLLNDRGRKILPEAEEVVRRTRAI
EQFLEDSAGEPRGVLNVGASTTIGNYILPELIAEFSGNYPDAKVLLTIGNAHQIEHALEKGELDLGLIEGIPHSGVLDST
PWKKDELVVVVGKGHPWACDGAASVEMLGNAPWIMRETGSGTREVFEGAMAGKGISFSISLELGHTEAIKKAIEAGLGVG
CLSRIAVNRELEHGWLVEIACPLDLKRTLSLQTRQSGYKTRLLCAFWSLLNRHKDI
>Mature_295_residues
AISLRQLEIFEKVAQCEHVTQASTQLFLTQSAVSMAIAELERVAGAPLFERRGKRLLLNDRGRKILPEAEEVVRRTRAIE
QFLEDSAGEPRGVLNVGASTTIGNYILPELIAEFSGNYPDAKVLLTIGNAHQIEHALEKGELDLGLIEGIPHSGVLDSTP
WKKDELVVVVGKGHPWACDGAASVEMLGNAPWIMRETGSGTREVFEGAMAGKGISFSISLELGHTEAIKKAIEAGLGVGC
LSRIAVNRELEHGWLVEIACPLDLKRTLSLQTRQSGYKTRLLCAFWSLLNRHKDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=271, Percent_Identity=44.280442804428, Blast_Score=214, Evalue=6e-57,
Organism=Escherichia coli, GI1788296, Length=244, Percent_Identity=29.0983606557377, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI87082132, Length=260, Percent_Identity=29.6153846153846, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788748, Length=293, Percent_Identity=25.5972696245734, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI157672245, Length=284, Percent_Identity=26.4084507042254, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1790399, Length=273, Percent_Identity=23.4432234432234, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI145693105, Length=248, Percent_Identity=26.6129032258064, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787530, Length=252, Percent_Identity=26.984126984127, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787601, Length=196, Percent_Identity=27.5510204081633, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787806, Length=292, Percent_Identity=23.2876712328767, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787879, Length=251, Percent_Identity=25.8964143426295, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789204, Length=272, Percent_Identity=23.5294117647059, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1786401, Length=271, Percent_Identity=23.9852398523985, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788887, Length=216, Percent_Identity=28.2407407407407, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788626, Length=238, Percent_Identity=25.6302521008403, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787949, Length=198, Percent_Identity=28.7878787878788, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789506, Length=213, Percent_Identity=24.4131455399061, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790262, Length=257, Percent_Identity=24.5136186770428, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32369; Mature: 32238

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISLRQLEIFEKVAQCEHVTQASTQLFLTQSAVSMAIAELERVAGAPLFERRGKRLLLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEC
DRGRKILPEAEEVVRRTRAIEQFLEDSAGEPRGVLNVGASTTIGNYILPELIAEFSGNYP
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC
DAKVLLTIGNAHQIEHALEKGELDLGLIEGIPHSGVLDSTPWKKDELVVVVGKGHPWACD
CCEEEEEECCHHHHHHHHHHCCCCEEHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
GAASVEMLGNAPWIMRETGSGTREVFEGAMAGKGISFSISLELGHTEAIKKAIEAGLGVG
CCCHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCHH
CLSRIAVNRELEHGWLVEIACPLDLKRTLSLQTRQSGYKTRLLCAFWSLLNRHKDI
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AISLRQLEIFEKVAQCEHVTQASTQLFLTQSAVSMAIAELERVAGAPLFERRGKRLLLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEC
DRGRKILPEAEEVVRRTRAIEQFLEDSAGEPRGVLNVGASTTIGNYILPELIAEFSGNYP
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC
DAKVLLTIGNAHQIEHALEKGELDLGLIEGIPHSGVLDSTPWKKDELVVVVGKGHPWACD
CCEEEEEECCHHHHHHHHHHCCCCEEHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
GAASVEMLGNAPWIMRETGSGTREVFEGAMAGKGISFSISLELGHTEAIKKAIEAGLGVG
CCCHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCHH
CLSRIAVNRELEHGWLVEIACPLDLKRTLSLQTRQSGYKTRLLCAFWSLLNRHKDI
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]