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The map label for this gene is atoS [C]

Identifier: 39997909

GI number: 39997909

Start: 3095966

End: 3098614

Strand: Reverse

Name: atoS [C]

Synonym: GSU2816

Alternate gene names: 39997909

Gene position: 3098614-3095966 (Counterclockwise)

Preceding gene: 39997910

Following gene: 39997900

Centisome position: 81.24

GC content: 57.23

Gene sequence:

>2649_bases
ATGAAATTGATCCGGCAACTGCTGTCTGCTGCGGCCCTGACAGTCACAATCGGGGTTGTCACCTACTTCGCCGTTACCAG
GTACGTCGTACACAAGGCGGAGGAGAACCTCAAGAGCATTATCCTCTCTCATCGATCATTCCATGCGTACATCCAGCAGG
TGATGCATCCCACCTACTACAAGGCCAAGGATGAGGGCAAGATTGCCCGTGATTTCTATGCGCCGCAACTCCTCTCTTCA
TCCTACATGACCAGAGTCATGCACGGCCTCTTCAACAAGGAGCGGGAAAAGGAGGGGCTCCCGCTGGTGTACTACAAAAT
GGCTTCGCAAAATCCAAGGAACCCGGTGAACATTGCGGACGAGCGGGAGGCCTATCTCCTCGGGCTATTCAATACCCGGC
GCGACCTCAAATCCCATTCCGAGATCAGGACCATTGACGGGAAAAAGTACCTTCTCTACGCCAAACCGTTTCTCGAAACC
AATCAGGCGTGCCTGCGCTGCCACGGCAATCGCGCTGATTCGCCAATCGGGCTGCAGCAGATCTATTCCGGCCAGGGCGG
TTTCAATGAGTCGGCCGGGACAATTCGTGCGATCGAATCGATCCGCATCCCTCTGGACGATGAATTTACAGCGGCATTCG
TTGCCACGACCGCCTCATTGACGGCGGCAGTGATCCTCGCCGGCCTCTTTTTCTTCAACACGAGGCTGCGTCAACGCGTC
AGGCAAAGCACCGAAGCACTTGCGGAAAGCGAAGAGAACTATCGCCACTTCACCACCCTCACATCGGACTATGTCCACAA
GTGCTCGCGCAAGGGGAAGGAGCCATATCGAATCAAGTGGATCGGCGGTGCATTGAATGCAATCTCCGGCTACAGCAGCG
AGGAGATGTTCGCGCGCGGTTGCTGGCTCTCAATAGTCCACCCTGACGATAAGCACCCGACGGCAGAGGCCCTTGCTAGC
CTCAAGCCGGGCGATATCAGGGATATATCGTTCAGGATCATAGCCAAAGATGAGAGTATCCGGTGGATAACGGATTCCTG
CCAGTGCGAACAAGGTGCAACGGAGGACGAACTGATCCTCTACGGTGCGGCCTCGGACACCACCGACCGCAAGAAGGCCG
AAGCGTTGCTGCATTTAACCCGCGCCAGCGTCAATGCCGTATCCGACGCGATTTTCTGGATCACGCCCGACGCCCGTTTT
GTAGATGTCAACGAGGCCGCGTGCCGCACTCTTGGCTATTCCCGCGAAGAACTGTTGAACCGTGGGGTCTTCGATGTAGA
CCCCGACTCCCCGCCTGAAGTATGGGCGCAGCACTTCCCGGAACTTCGCAGGCAGGGAACCCTCCGGTTCGAGTCGCGCC
ATCGCACTAAAGATGGCCGCATTATTCCGGTCGAGATCGTTGCCAACTATATTCGTCACGACAACGATGAGTTCAATTGT
GCTGTTGTCAGGGACATCACCGAACGCAAGCGCGCTGAAGAAGAACACGAGAGCCTTGAGAAACAGCTCCTTCATGCCCA
GAAACTGGAGAGCCTCGGCGTGCTCGCCGGCGGCATCGCCCATGACTTCAATAACATCCTGACGGCAATCGTCGGCAATA
CCGACCTCGCACTGATGCGTCTCAATCCCGAATCACCGGTGCGCGACAACCTGGCGCGAATCGAACGGGCTGCCAACCGG
GCATCCGATCTTGCCAAGCAGATGCTCGCCTATTCCGGCAAGGGTAAATTCGTCATCGAACCGATCGATCTGAACCGGCT
GGTCGAAGAGATGACCCATATGCTGCAAGTCTCCATTTCCAAGAAGGCCGTGCTCCGCTTCAATTTTGCCGACTCTCTGC
CCACGGTCGATGCCGATGCCACCCAACTCCGCCAGATCATCATGAACCTGGTTATCAATGCCTCAGAGGCGATTGCCGAT
AAGAGCGGCGTCATCGCCATCAGCACGGGGTGCATGCAGTGCGACAGGAAGTATTTAAGCAACGCCTGGCTCAATGAGTC
GATCCCCGAAGGACTCTACGTCTGGCTGGAGGTTGCCGACACCGGTTGCGGCATGGACAGGGAGACCGTGTCGAAGATCT
TCGACCCGTTCTTCACAACCAAGTTTACCGGCCGCGGCCTGGGGATGGCTGCGGTGCTGGGCATCGTACGCGGGCACAAG
GGGGCGATACGGGTCTACAGCGAGCCCGGCCGGGGCACGACGTTCAAGGTGCTCCTGCCGGCCGGCGACAAACCCAAAGA
CCTGTTCAATGGCGATCAGCAGAAGCAGGCGGTGTGGAAAGGATGCGGCACTGTCCTGTTGGTCGATGACGAGGAAACGG
TTATCGGCATCGGTGCTGAGATGCTGAAAGAACTCGGGTTCGATGTCCTGACCGCCATGGACGGCCGCGAGGCGCTCGAA
GTGTTTGCGCAGCACCAGGAAAAGATCTGCTGTATCATTCTCGATCTCACGATGCCCCATCTGGACGGCGAACAGACCTT
CCGGGAGCTGCGGCAGCTCAAGCCCGACGTTAAGGTAATCATGTCCAGCGGCTATAACGAGCAGGAGATCAACCAGCGCT
TTGCCGGAAAGGGGCTGGCAGGGTTCATCCAGAAGCCGTACCGGCTGTCCATGCTTAAGGAGACCATCAGGAACGTTCAG
CAAGACTGA

Upstream 100 bases:

>100_bases
ATGTCTGCGGTTTAGGTGTAGAATTCAGTTGCCTTTCGGCCTGAACCAAAGCTCCAATGCAGTGCCCGAAAGACCCGAAC
AGGCAGATTGTGGAGGGATA

Downstream 100 bases:

>100_bases
CGTGAACCGCTTGATGTACCAGTCGAACTCTGTGTCCGCAGCAAAAAGGGCGCTCTCCATCGGGGAACGCCCTTTTCGCT
GCAGGGAGGGAGTGCACGAT

Product: sensory box histidine kinase/response regulator

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 882; Mature: 882

Protein sequence:

>882_residues
MKLIRQLLSAAALTVTIGVVTYFAVTRYVVHKAEENLKSIILSHRSFHAYIQQVMHPTYYKAKDEGKIARDFYAPQLLSS
SYMTRVMHGLFNKEREKEGLPLVYYKMASQNPRNPVNIADEREAYLLGLFNTRRDLKSHSEIRTIDGKKYLLYAKPFLET
NQACLRCHGNRADSPIGLQQIYSGQGGFNESAGTIRAIESIRIPLDDEFTAAFVATTASLTAAVILAGLFFFNTRLRQRV
RQSTEALAESEENYRHFTTLTSDYVHKCSRKGKEPYRIKWIGGALNAISGYSSEEMFARGCWLSIVHPDDKHPTAEALAS
LKPGDIRDISFRIIAKDESIRWITDSCQCEQGATEDELILYGAASDTTDRKKAEALLHLTRASVNAVSDAIFWITPDARF
VDVNEAACRTLGYSREELLNRGVFDVDPDSPPEVWAQHFPELRRQGTLRFESRHRTKDGRIIPVEIVANYIRHDNDEFNC
AVVRDITERKRAEEEHESLEKQLLHAQKLESLGVLAGGIAHDFNNILTAIVGNTDLALMRLNPESPVRDNLARIERAANR
ASDLAKQMLAYSGKGKFVIEPIDLNRLVEEMTHMLQVSISKKAVLRFNFADSLPTVDADATQLRQIIMNLVINASEAIAD
KSGVIAISTGCMQCDRKYLSNAWLNESIPEGLYVWLEVADTGCGMDRETVSKIFDPFFTTKFTGRGLGMAAVLGIVRGHK
GAIRVYSEPGRGTTFKVLLPAGDKPKDLFNGDQQKQAVWKGCGTVLLVDDEETVIGIGAEMLKELGFDVLTAMDGREALE
VFAQHQEKICCIILDLTMPHLDGEQTFRELRQLKPDVKVIMSSGYNEQEINQRFAGKGLAGFIQKPYRLSMLKETIRNVQ
QD

Sequences:

>Translated_882_residues
MKLIRQLLSAAALTVTIGVVTYFAVTRYVVHKAEENLKSIILSHRSFHAYIQQVMHPTYYKAKDEGKIARDFYAPQLLSS
SYMTRVMHGLFNKEREKEGLPLVYYKMASQNPRNPVNIADEREAYLLGLFNTRRDLKSHSEIRTIDGKKYLLYAKPFLET
NQACLRCHGNRADSPIGLQQIYSGQGGFNESAGTIRAIESIRIPLDDEFTAAFVATTASLTAAVILAGLFFFNTRLRQRV
RQSTEALAESEENYRHFTTLTSDYVHKCSRKGKEPYRIKWIGGALNAISGYSSEEMFARGCWLSIVHPDDKHPTAEALAS
LKPGDIRDISFRIIAKDESIRWITDSCQCEQGATEDELILYGAASDTTDRKKAEALLHLTRASVNAVSDAIFWITPDARF
VDVNEAACRTLGYSREELLNRGVFDVDPDSPPEVWAQHFPELRRQGTLRFESRHRTKDGRIIPVEIVANYIRHDNDEFNC
AVVRDITERKRAEEEHESLEKQLLHAQKLESLGVLAGGIAHDFNNILTAIVGNTDLALMRLNPESPVRDNLARIERAANR
ASDLAKQMLAYSGKGKFVIEPIDLNRLVEEMTHMLQVSISKKAVLRFNFADSLPTVDADATQLRQIIMNLVINASEAIAD
KSGVIAISTGCMQCDRKYLSNAWLNESIPEGLYVWLEVADTGCGMDRETVSKIFDPFFTTKFTGRGLGMAAVLGIVRGHK
GAIRVYSEPGRGTTFKVLLPAGDKPKDLFNGDQQKQAVWKGCGTVLLVDDEETVIGIGAEMLKELGFDVLTAMDGREALE
VFAQHQEKICCIILDLTMPHLDGEQTFRELRQLKPDVKVIMSSGYNEQEINQRFAGKGLAGFIQKPYRLSMLKETIRNVQ
QD
>Mature_882_residues
MKLIRQLLSAAALTVTIGVVTYFAVTRYVVHKAEENLKSIILSHRSFHAYIQQVMHPTYYKAKDEGKIARDFYAPQLLSS
SYMTRVMHGLFNKEREKEGLPLVYYKMASQNPRNPVNIADEREAYLLGLFNTRRDLKSHSEIRTIDGKKYLLYAKPFLET
NQACLRCHGNRADSPIGLQQIYSGQGGFNESAGTIRAIESIRIPLDDEFTAAFVATTASLTAAVILAGLFFFNTRLRQRV
RQSTEALAESEENYRHFTTLTSDYVHKCSRKGKEPYRIKWIGGALNAISGYSSEEMFARGCWLSIVHPDDKHPTAEALAS
LKPGDIRDISFRIIAKDESIRWITDSCQCEQGATEDELILYGAASDTTDRKKAEALLHLTRASVNAVSDAIFWITPDARF
VDVNEAACRTLGYSREELLNRGVFDVDPDSPPEVWAQHFPELRRQGTLRFESRHRTKDGRIIPVEIVANYIRHDNDEFNC
AVVRDITERKRAEEEHESLEKQLLHAQKLESLGVLAGGIAHDFNNILTAIVGNTDLALMRLNPESPVRDNLARIERAANR
ASDLAKQMLAYSGKGKFVIEPIDLNRLVEEMTHMLQVSISKKAVLRFNFADSLPTVDADATQLRQIIMNLVINASEAIAD
KSGVIAISTGCMQCDRKYLSNAWLNESIPEGLYVWLEVADTGCGMDRETVSKIFDPFFTTKFTGRGLGMAAVLGIVRGHK
GAIRVYSEPGRGTTFKVLLPAGDKPKDLFNGDQQKQAVWKGCGTVLLVDDEETVIGIGAEMLKELGFDVLTAMDGREALE
VFAQHQEKICCIILDLTMPHLDGEQTFRELRQLKPDVKVIMSSGYNEQEINQRFAGKGLAGFIQKPYRLSMLKETIRNVQ
QD

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=360, Percent_Identity=28.6111111111111, Blast_Score=129, Evalue=7e-31,
Organism=Escherichia coli, GI1790436, Length=260, Percent_Identity=31.9230769230769, Blast_Score=120, Evalue=4e-28,
Organism=Escherichia coli, GI48994928, Length=521, Percent_Identity=25.9117082533589, Blast_Score=116, Evalue=7e-27,
Organism=Escherichia coli, GI87081816, Length=365, Percent_Identity=26.027397260274, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI145693157, Length=294, Percent_Identity=24.4897959183673, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788713, Length=318, Percent_Identity=22.6415094339623, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1790300, Length=246, Percent_Identity=25.609756097561, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1789149, Length=232, Percent_Identity=28.8793103448276, Blast_Score=73, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 99020; Mature: 99020

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIRQLLSAAALTVTIGVVTYFAVTRYVVHKAEENLKSIILSHRSFHAYIQQVMHPTYY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KAKDEGKIARDFYAPQLLSSSYMTRVMHGLFNKEREKEGLPLVYYKMASQNPRNPVNIAD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCCCCCCCCC
EREAYLLGLFNTRRDLKSHSEIRTIDGKKYLLYAKPFLETNQACLRCHGNRADSPIGLQQ
CCCEEEEEEHHHHHHHHCCCCEEEECCCEEEEEECCCHHCCHHHHHCCCCCCCCCCCHHH
IYSGQGGFNESAGTIRAIESIRIPLDDEFTAAFVATTASLTAAVILAGLFFFNTRLRQRV
HHCCCCCCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQSTEALAESEENYRHFTTLTSDYVHKCSRKGKEPYRIKWIGGALNAISGYSSEEMFARG
HHHHHHHHHCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCHHHHHCC
CWLSIVHPDDKHPTAEALASLKPGDIRDISFRIIAKDESIRWITDSCQCEQGATEDELIL
CEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCEEE
YGAASDTTDRKKAEALLHLTRASVNAVSDAIFWITPDARFVDVNEAACRTLGYSREELLN
EECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCHHHHHHCCCCHHHHHH
RGVFDVDPDSPPEVWAQHFPELRRQGTLRFESRHRTKDGRIIPVEIVANYIRHDNDEFNC
CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHCCCCCCCEEEHHHHHHHHHCCCCCCCE
AVVRDITERKRAEEEHESLEKQLLHAQKLESLGVLAGGIAHDFNNILTAIVGNTDLALMR
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LNPESPVRDNLARIERAANRASDLAKQMLAYSGKGKFVIEPIDLNRLVEEMTHMLQVSIS
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCC
KKAVLRFNFADSLPTVDADATQLRQIIMNLVINASEAIADKSGVIAISTGCMQCDRKYLS
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCHHHHHHHHHH
NAWLNESIPEGLYVWLEVADTGCGMDRETVSKIFDPFFTTKFTGRGLGMAAVLGIVRGHK
HHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHCCC
GAIRVYSEPGRGTTFKVLLPAGDKPKDLFNGDQQKQAVWKGCGTVLLVDDEETVIGIGAE
CEEEEEECCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHCCCEEEEECCCCCEEECCHH
MLKELGFDVLTAMDGREALEVFAQHQEKICCIILDLTMPHLDGEQTFRELRQLKPDVKVI
HHHHCCCHHHHHCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHH
MSSGYNEQEINQRFAGKGLAGFIQKPYRLSMLKETIRNVQQD
HHCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLIRQLLSAAALTVTIGVVTYFAVTRYVVHKAEENLKSIILSHRSFHAYIQQVMHPTYY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KAKDEGKIARDFYAPQLLSSSYMTRVMHGLFNKEREKEGLPLVYYKMASQNPRNPVNIAD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCCCCCCCCC
EREAYLLGLFNTRRDLKSHSEIRTIDGKKYLLYAKPFLETNQACLRCHGNRADSPIGLQQ
CCCEEEEEEHHHHHHHHCCCCEEEECCCEEEEEECCCHHCCHHHHHCCCCCCCCCCCHHH
IYSGQGGFNESAGTIRAIESIRIPLDDEFTAAFVATTASLTAAVILAGLFFFNTRLRQRV
HHCCCCCCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQSTEALAESEENYRHFTTLTSDYVHKCSRKGKEPYRIKWIGGALNAISGYSSEEMFARG
HHHHHHHHHCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCHHHHHCC
CWLSIVHPDDKHPTAEALASLKPGDIRDISFRIIAKDESIRWITDSCQCEQGATEDELIL
CEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCEEE
YGAASDTTDRKKAEALLHLTRASVNAVSDAIFWITPDARFVDVNEAACRTLGYSREELLN
EECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCHHHHHHCCCCHHHHHH
RGVFDVDPDSPPEVWAQHFPELRRQGTLRFESRHRTKDGRIIPVEIVANYIRHDNDEFNC
CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHCCCCCCCEEEHHHHHHHHHCCCCCCCE
AVVRDITERKRAEEEHESLEKQLLHAQKLESLGVLAGGIAHDFNNILTAIVGNTDLALMR
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LNPESPVRDNLARIERAANRASDLAKQMLAYSGKGKFVIEPIDLNRLVEEMTHMLQVSIS
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCC
KKAVLRFNFADSLPTVDADATQLRQIIMNLVINASEAIADKSGVIAISTGCMQCDRKYLS
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCHHHHHHHHHH
NAWLNESIPEGLYVWLEVADTGCGMDRETVSKIFDPFFTTKFTGRGLGMAAVLGIVRGHK
HHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHCCC
GAIRVYSEPGRGTTFKVLLPAGDKPKDLFNGDQQKQAVWKGCGTVLLVDDEETVIGIGAE
CEEEEEECCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHCCCEEEEECCCCCEEECCHH
MLKELGFDVLTAMDGREALEVFAQHQEKICCIILDLTMPHLDGEQTFRELRQLKPDVKVI
HHHHCCCHHHHHCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHH
MSSGYNEQEINQRFAGKGLAGFIQKPYRLSMLKETIRNVQQD
HHCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA