Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997861
Identifier: 39997861
GI number: 39997861
Start: 3047068
End: 3048744
Strand: Direct
Name: 39997861
Synonym: GSU2768
Alternate gene names: NA
Gene position: 3047068-3048744 (Clockwise)
Preceding gene: 39997850
Following gene: 39997870
Centisome position: 79.89
GC content: 65.95
Gene sequence:
>1677_bases ATGAAACACCTGTTCCGTTTCGCCTCGGCCCTGGCCGCCCTGGCCTCACTGCTCGTTGCCGCGCCCGCGCTGGCCGAGCC GTGGAAGTTCGGCGTCATGTCAGACACCCAGTGGAAATCCAACCTCGACGGCATCAACCCCGACACGGTTGCGGTCGGCA TCATCAACCAGCTCAACCAGGAATTCATCGCCCATGACGTGAAGTTCGTCATCCAGGTGGGCGACCTGACCGACAAGTCC GACAGCACCTACCCCACCTCCCTGGCCACCCGCGCCGCCGCGGCCCAGCCCCTCTACGACGCCGGCATCGGCTTCTACCC GCTCCGCGGCAACCATGAAAGCTCCCAGGCGTCCACCGCTTGGTTCAGCGCCGCCTTCCCCCAGACCACGGCCGGCGGCC CCAACGTCTTCGGCGCCACCAACTTCAGCAGTCCCTTTGCCGCGCTGAACGGCCTCAGCTACTCCTTCGACTACAACAAC GCCCGGTTCGTGCTCCTCGACCAGTTCACCCGCACCGACGGGACCAACTACCTGAACAGCTCCACCAACAACATCATCGA CCAGCAGGGCTGGATCGACACCCAGCTCGCATCGCGGCCCTCCGACAGCCACGCCTTCGTCTTCAGCCACAAGAACCTGA TCGGCCAGAACCACGCCGACGACCTGTTCGGCTCGAACCCCGCCTATAACAGCTCCGGCAATGTGGCGGCCCGCAACGCC TTCCTCGCCAGCCTGCAGAACAACGGCGTCCGCTACCAGTTCGGCGGCCACGACCACATGCATCACCGCGCCATCATCAC CAGCCCGGACACCAACGCCCGGGTCCAGGAGATCATCACCTCCTCCAACAGCTACAAGTTCTACATCCCACAGGTCCCCT CCAATGACGAGAAGTACAATGTCCCCGCCTTCGGCGGCCCCCGCGAGATCCCCATCGCCCAGGAGTTGTTCGCCATCGGC TACTACATCGTAACCGTGGACGGGCCTCGGGTCACCGTTGACCACTATGCCGCGCCCAACGGCTGCAACGGCGACTGCGA CCTGACCGTCACCCCCGCCCTCAGCGGCCACTTCACCAAGCGCGAAACCTTCGGCTACAGCCTCAACGGCAAGGAATTCA CGGTGGCCCAGGGCCAGTCGTACACCGCCGTGCAGGACAGCTTCCGTGGCACCACCGCCCGGATCCTCGACGGCACCAAC GCCAGCACGGGCACGGACTACGCCGGCCGCGCCCTCACCAAGGCCATCGATACCGGCTGGACCCCGCGGGAGCAGCACCG GCACGGCCGGGGCCACGGCCATCATGACAACCGCCGCCGCGACGCCGACAGCGACACGGCCAGCCACATCCTCACCCTGT GGGGCATGGCCGACCTGGGCAGCAGCCAGACCGACGTCTATACCCTCTCCCTGACCTACGACCCGGACAAGGCCCGGCCC GAGCACCTGGGGCGGGGACTTTTCGGCCTCGCAGCCAGGGATGCGGACGGCACCTGGGTGAACGCGGTGGAGATGAACGC CGGCGGCAGCGCGAAATTCGTCAAGGGTGCCTGGAAGCCGGGCTACGGGCTGGGCACCTACGGCATCGACCCGAGCACCA AAACCGCCTGGGCAGTGGTCAATCACCAGGGCGACTTCGCCGTGACCGGCTTCGCGGAAACGTGCCGGAAAAAATAA
Upstream 100 bases:
>100_bases AGTCTTTTAACCCAACGTCAACCGACCTGCAACATGGCGGGTCTACACTTTCCTCCCGACGGCTGCTCCGGCAGCCGAAT CCACCGAGAGGGAGAGAAAG
Downstream 100 bases:
>100_bases CGCCGCCTCCCCGCGGCAGCGCGGCAGACAGCGGCTAATTCAAACAGCACCGGGCCGGGGCGTAATGCCCCGGCCTTTGT TGTTGGTATGTATTGCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MKHLFRFASALAALASLLVAAPALAEPWKFGVMSDTQWKSNLDGINPDTVAVGIINQLNQEFIAHDVKFVIQVGDLTDKS DSTYPTSLATRAAAAQPLYDAGIGFYPLRGNHESSQASTAWFSAAFPQTTAGGPNVFGATNFSSPFAALNGLSYSFDYNN ARFVLLDQFTRTDGTNYLNSSTNNIIDQQGWIDTQLASRPSDSHAFVFSHKNLIGQNHADDLFGSNPAYNSSGNVAARNA FLASLQNNGVRYQFGGHDHMHHRAIITSPDTNARVQEIITSSNSYKFYIPQVPSNDEKYNVPAFGGPREIPIAQELFAIG YYIVTVDGPRVTVDHYAAPNGCNGDCDLTVTPALSGHFTKRETFGYSLNGKEFTVAQGQSYTAVQDSFRGTTARILDGTN ASTGTDYAGRALTKAIDTGWTPREQHRHGRGHGHHDNRRRDADSDTASHILTLWGMADLGSSQTDVYTLSLTYDPDKARP EHLGRGLFGLAARDADGTWVNAVEMNAGGSAKFVKGAWKPGYGLGTYGIDPSTKTAWAVVNHQGDFAVTGFAETCRKK
Sequences:
>Translated_558_residues MKHLFRFASALAALASLLVAAPALAEPWKFGVMSDTQWKSNLDGINPDTVAVGIINQLNQEFIAHDVKFVIQVGDLTDKS DSTYPTSLATRAAAAQPLYDAGIGFYPLRGNHESSQASTAWFSAAFPQTTAGGPNVFGATNFSSPFAALNGLSYSFDYNN ARFVLLDQFTRTDGTNYLNSSTNNIIDQQGWIDTQLASRPSDSHAFVFSHKNLIGQNHADDLFGSNPAYNSSGNVAARNA FLASLQNNGVRYQFGGHDHMHHRAIITSPDTNARVQEIITSSNSYKFYIPQVPSNDEKYNVPAFGGPREIPIAQELFAIG YYIVTVDGPRVTVDHYAAPNGCNGDCDLTVTPALSGHFTKRETFGYSLNGKEFTVAQGQSYTAVQDSFRGTTARILDGTN ASTGTDYAGRALTKAIDTGWTPREQHRHGRGHGHHDNRRRDADSDTASHILTLWGMADLGSSQTDVYTLSLTYDPDKARP EHLGRGLFGLAARDADGTWVNAVEMNAGGSAKFVKGAWKPGYGLGTYGIDPSTKTAWAVVNHQGDFAVTGFAETCRKK >Mature_558_residues MKHLFRFASALAALASLLVAAPALAEPWKFGVMSDTQWKSNLDGINPDTVAVGIINQLNQEFIAHDVKFVIQVGDLTDKS DSTYPTSLATRAAAAQPLYDAGIGFYPLRGNHESSQASTAWFSAAFPQTTAGGPNVFGATNFSSPFAALNGLSYSFDYNN ARFVLLDQFTRTDGTNYLNSSTNNIIDQQGWIDTQLASRPSDSHAFVFSHKNLIGQNHADDLFGSNPAYNSSGNVAARNA FLASLQNNGVRYQFGGHDHMHHRAIITSPDTNARVQEIITSSNSYKFYIPQVPSNDEKYNVPAFGGPREIPIAQELFAIG YYIVTVDGPRVTVDHYAAPNGCNGDCDLTVTPALSGHFTKRETFGYSLNGKEFTVAQGQSYTAVQDSFRGTTARILDGTN ASTGTDYAGRALTKAIDTGWTPREQHRHGRGHGHHDNRRRDADSDTASHILTLWGMADLGSSQTDVYTLSLTYDPDKARP EHLGRGLFGLAARDADGTWVNAVEMNAGGSAKFVKGAWKPGYGLGTYGIDPSTKTAWAVVNHQGDFAVTGFAETCRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60421; Mature: 60421
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00125 SER_THR_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLFRFASALAALASLLVAAPALAEPWKFGVMSDTQWKSNLDGINPDTVAVGIINQLNQ CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEHHHHHHHH EFIAHDVKFVIQVGDLTDKSDSTYPTSLATRAAAAQPLYDAGIGFYPLRGNHESSQASTA HHHHHCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCEEECCCCCCCCCCCHH WFSAAFPQTTAGGPNVFGATNFSSPFAALNGLSYSFDYNNARFVLLDQFTRTDGTNYLNS EEEECCCCCCCCCCCCEECCCCCCHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCCC STNNIIDQQGWIDTQLASRPSDSHAFVFSHKNLIGQNHADDLFGSNPAYNSSGNVAARNA CCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCEEHHHH FLASLQNNGVRYQFGGHDHMHHRAIITSPDTNARVQEIITSSNSYKFYIPQVPSNDEKYN HHHHHHCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEE VPAFGGPREIPIAQELFAIGYYIVTVDGPRVTVDHYAAPNGCNGDCDLTVTPALSGHFTK CCCCCCCCCCCHHHHHHEEEEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCC RETFGYSLNGKEFTVAQGQSYTAVQDSFRGTTARILDGTNASTGTDYAGRALTKAIDTGW HHHCCEECCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC TPREQHRHGRGHGHHDNRRRDADSDTASHILTLWGMADLGSSQTDVYTLSLTYDPDKARP CCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCH EHLGRGLFGLAARDADGTWVNAVEMNAGGSAKFVKGAWKPGYGLGTYGIDPSTKTAWAVV HHHCCCCEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEE NHQGDFAVTGFAETCRKK ECCCCEEEECHHHHHCCC >Mature Secondary Structure MKHLFRFASALAALASLLVAAPALAEPWKFGVMSDTQWKSNLDGINPDTVAVGIINQLNQ CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEHHHHHHHH EFIAHDVKFVIQVGDLTDKSDSTYPTSLATRAAAAQPLYDAGIGFYPLRGNHESSQASTA HHHHHCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCEEECCCCCCCCCCCHH WFSAAFPQTTAGGPNVFGATNFSSPFAALNGLSYSFDYNNARFVLLDQFTRTDGTNYLNS EEEECCCCCCCCCCCCEECCCCCCHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCCC STNNIIDQQGWIDTQLASRPSDSHAFVFSHKNLIGQNHADDLFGSNPAYNSSGNVAARNA CCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCEEHHHH FLASLQNNGVRYQFGGHDHMHHRAIITSPDTNARVQEIITSSNSYKFYIPQVPSNDEKYN HHHHHHCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEE VPAFGGPREIPIAQELFAIGYYIVTVDGPRVTVDHYAAPNGCNGDCDLTVTPALSGHFTK CCCCCCCCCCCHHHHHHEEEEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCC RETFGYSLNGKEFTVAQGQSYTAVQDSFRGTTARILDGTNASTGTDYAGRALTKAIDTGW HHHCCEECCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC TPREQHRHGRGHGHHDNRRRDADSDTASHILTLWGMADLGSSQTDVYTLSLTYDPDKARP CCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCH EHLGRGLFGLAARDADGTWVNAVEMNAGGSAKFVKGAWKPGYGLGTYGIDPSTKTAWAVV HHHCCCCEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEE NHQGDFAVTGFAETCRKK ECCCCEEEECHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA