Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997850
Identifier: 39997850
GI number: 39997850
Start: 3031262
End: 3032029
Strand: Direct
Name: 39997850
Synonym: GSU2756
Alternate gene names: NA
Gene position: 3031262-3032029 (Clockwise)
Preceding gene: 39997848
Following gene: 39997861
Centisome position: 79.47
GC content: 67.97
Gene sequence:
>768_bases GTGAACACACCCTTATCAGAGACACATCTCCTGGATGCCTGTCGGCAGCTCTTCGGCCCCGATGTCGATCTGTCGCGCGA ATTCCTCCACTACCTCCAGCCGAGCGGCGCCAAGGCCGCCTTCCGGCAACGGGCACGGGAAACCCACCCGGACCTCTTCG GCCACGAATCTCCCCATCTCCAGCAGCGCCAGGCCGAGCTGTTCCGCCAGGTGCGCGAGGCCTACGACCTCATGTGCGCC TTTTTCAGACACCGGGAGGAAGGACTCGCCCGGCACGAAAGCCCGTGCCAGTCCGCGGGCAGGAGGAGATCCGCCGGGCG GGAGCGACCCCGGGACGACGGCCCCCGGGACGGATTCTATCAGGGTCACCTGCCCCAGCGCCCCCTGAAACTGGGCCGAT ACCTCTATTACCGCGGCATGATCTCCTACCGGGACCTGATCCGGGCCCTGGCCTGGCAGCGGGCGGGACGCCCCCCCATC GGCGCCCTCGCGACCCACTGGGGCTGGCTCGACGACACCCAGGTCCGGACCATTCTCTCCGCCGGCCATCACCCCGGCCG TTTTGGCGAAAAGGCCATCCGGTTCGGCTTCCTCACCCCCCGCCAGGTGGAGCTCCTGCTCTTCCGCCAGCGTTCGCGGC AGACGCGCCTCGGCCAGTATTTCGTAGCAGGCAACGTGGTGAGCATGACGGAAATGGAGCGACTCGCCCGGGAACTTCGC CAGCACAATGCACGCACCGGCGGCCCAAAGCGGGCCACGGGCCGCTGA
Upstream 100 bases:
>100_bases ATCGGTCGCGCGGGCACGGACCGATCCCGGCGCTTGTATCGGACGGGTCACTATAGTATAACACCCAGACGAGCCGTCCA TCAGCCCGGGGGCACTGCCC
Downstream 100 bases:
>100_bases CCGCTACTCCCCGTTCACCAGACGCTCGATCAGCTTGCCCATCTTCACGTCGGGGAGCACGTAATCCACCGCTCCGGTGG CGATGGCGGAGCGGGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ-Like Protein; Heat Shock Protein DNAJ Domain-Containing Protein
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MNTPLSETHLLDACRQLFGPDVDLSREFLHYLQPSGAKAAFRQRARETHPDLFGHESPHLQQRQAELFRQVREAYDLMCA FFRHREEGLARHESPCQSAGRRRSAGRERPRDDGPRDGFYQGHLPQRPLKLGRYLYYRGMISYRDLIRALAWQRAGRPPI GALATHWGWLDDTQVRTILSAGHHPGRFGEKAIRFGFLTPRQVELLLFRQRSRQTRLGQYFVAGNVVSMTEMERLARELR QHNARTGGPKRATGR
Sequences:
>Translated_255_residues MNTPLSETHLLDACRQLFGPDVDLSREFLHYLQPSGAKAAFRQRARETHPDLFGHESPHLQQRQAELFRQVREAYDLMCA FFRHREEGLARHESPCQSAGRRRSAGRERPRDDGPRDGFYQGHLPQRPLKLGRYLYYRGMISYRDLIRALAWQRAGRPPI GALATHWGWLDDTQVRTILSAGHHPGRFGEKAIRFGFLTPRQVELLLFRQRSRQTRLGQYFVAGNVVSMTEMERLARELR QHNARTGGPKRATGR >Mature_255_residues MNTPLSETHLLDACRQLFGPDVDLSREFLHYLQPSGAKAAFRQRARETHPDLFGHESPHLQQRQAELFRQVREAYDLMCA FFRHREEGLARHESPCQSAGRRRSAGRERPRDDGPRDGFYQGHLPQRPLKLGRYLYYRGMISYRDLIRALAWQRAGRPPI GALATHWGWLDDTQVRTILSAGHHPGRFGEKAIRFGFLTPRQVELLLFRQRSRQTRLGQYFVAGNVVSMTEMERLARELR QHNARTGGPKRATGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29565; Mature: 29565
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPLSETHLLDACRQLFGPDVDLSREFLHYLQPSGAKAAFRQRARETHPDLFGHESPHL CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHH QQRQAELFRQVREAYDLMCAFFRHREEGLARHESPCQSAGRRRSAGRERPRDDGPRDGFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC QGHLPQRPLKLGRYLYYRGMISYRDLIRALAWQRAGRPPIGALATHWGWLDDTQVRTILS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHH AGHHPGRFGEKAIRFGFLTPRQVELLLFRQRSRQTRLGQYFVAGNVVSMTEMERLARELR CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QHNARTGGPKRATGR HCCCCCCCCCCCCCC >Mature Secondary Structure MNTPLSETHLLDACRQLFGPDVDLSREFLHYLQPSGAKAAFRQRARETHPDLFGHESPHL CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHH QQRQAELFRQVREAYDLMCAFFRHREEGLARHESPCQSAGRRRSAGRERPRDDGPRDGFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC QGHLPQRPLKLGRYLYYRGMISYRDLIRALAWQRAGRPPIGALATHWGWLDDTQVRTILS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHH AGHHPGRFGEKAIRFGFLTPRQVELLLFRQRSRQTRLGQYFVAGNVVSMTEMERLARELR CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QHNARTGGPKRATGR HCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA