| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997836
Identifier: 39997836
GI number: 39997836
Start: 3018809
End: 3019237
Strand: Reverse
Name: 39997836
Synonym: GSU2742
Alternate gene names: NA
Gene position: 3019237-3018809 (Counterclockwise)
Preceding gene: 39997837
Following gene: 39997835
Centisome position: 79.16
GC content: 59.44
Gene sequence:
>429_bases ATGACGATAGTGGTACGTCTGCTTTCGGCCGTCGCTATCCTCGCGTTGACGGCGGGAAGCGTGCTGGCCGCCGAATGGGT GGTGCTCGACGAGGACCCTATGCTCTCCAATTTTTATTATGATTCCTCGTCCGTGAGCCGGGACAAGGAGGGGATGGTCT CCGTGTGGACCAGGGCCATCTATTCCGAGGAGGGCAAAGCCGATGCCCTCGACACCATGGGAAACCCTCCGGCGTTCAAG GACCTGAGCCACACCCACTTCCTCTACACCATCGACTGCAAGGCTGCAAAATCCCGCCTGGAAAAGGTCATCCACTTTGA CGACAAGGCGGAGCCCATCAGGGAGTACAACCTCTCGGGCAAGACCGACTGGGAGGCGATCGACGAGTTCACCCGCCTGG GGCTTCTGCAGGAAGCCGTCTGTCAGTAG
Upstream 100 bases:
>100_bases CGCCAAGGCGATCCCGGACAAGGATGCCAAGCTCGTTGCCGAGTATATCCTCAAGACCTTCAAGTAATCCGGAGCCGCCT CCGGGAGAAAGGATTCTGTC
Downstream 100 bases:
>100_bases CTGGCAACGGAAGCGAAGCCGGCCCGTCCGTGCCGGCTTCGCTTCTCATCCCATCTCCCCCCTGTCTACTCTTTGTGGCC CCTTTCGGGGTGTCGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTIVVRLLSAVAILALTAGSVLAAEWVVLDEDPMLSNFYYDSSSVSRDKEGMVSVWTRAIYSEEGKADALDTMGNPPAFK DLSHTHFLYTIDCKAAKSRLEKVIHFDDKAEPIREYNLSGKTDWEAIDEFTRLGLLQEAVCQ
Sequences:
>Translated_142_residues MTIVVRLLSAVAILALTAGSVLAAEWVVLDEDPMLSNFYYDSSSVSRDKEGMVSVWTRAIYSEEGKADALDTMGNPPAFK DLSHTHFLYTIDCKAAKSRLEKVIHFDDKAEPIREYNLSGKTDWEAIDEFTRLGLLQEAVCQ >Mature_141_residues TIVVRLLSAVAILALTAGSVLAAEWVVLDEDPMLSNFYYDSSSVSRDKEGMVSVWTRAIYSEEGKADALDTMGNPPAFKD LSHTHFLYTIDCKAAKSRLEKVIHFDDKAEPIREYNLSGKTDWEAIDEFTRLGLLQEAVCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15864; Mature: 15733
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVVRLLSAVAILALTAGSVLAAEWVVLDEDPMLSNFYYDSSSVSRDKEGMVSVWTRAI CHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCHHEEECCCCCCCCCCHHHHHHHHHH YSEEGKADALDTMGNPPAFKDLSHTHFLYTIDCKAAKSRLEKVIHFDDKAEPIREYNLSG HCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCHHHHCCCCC KTDWEAIDEFTRLGLLQEAVCQ CCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIVVRLLSAVAILALTAGSVLAAEWVVLDEDPMLSNFYYDSSSVSRDKEGMVSVWTRAI HHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCHHEEECCCCCCCCCCHHHHHHHHHH YSEEGKADALDTMGNPPAFKDLSHTHFLYTIDCKAAKSRLEKVIHFDDKAEPIREYNLSG HCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCHHHHCCCCC KTDWEAIDEFTRLGLLQEAVCQ CCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA