Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997755
Identifier: 39997755
GI number: 39997755
Start: 2932127
End: 2932693
Strand: Direct
Name: 39997755
Synonym: GSU2661
Alternate gene names: NA
Gene position: 2932127-2932693 (Clockwise)
Preceding gene: 39997754
Following gene: 39997761
Centisome position: 76.88
GC content: 63.49
Gene sequence:
>567_bases ATGAAGCGCAACATCACCCAGACCCTGGTTGACGAGCACAAACTGATCCTCCGGATGCTTGACGTACTCGAGCGCAACGC CTCTCTGACGGCGGAAGGGCTCTACACCAACTACCGCTTCTATCTCGATGCGGTGGACTTCATCCGCCACTATGCCGACC GCTTCCACCACGCCAAGGAGGAAGACGTCCTCTTCGAGGCCCTGGTGAACAACGGCATGCCCCGCGAGAACAGCCCGGTG GCGGCCATGCTCATGGAGCACGACCGGGGCCGGGCCTACGTGAAGGCCATGGAGGAGGCGGCCACCGCCGCCCTGGCGGG CAGCACCGGTCGTGACGGGGACATTGCGGAAAACGCCCTCGGCTACCTGATCATGCTCCGCGAGCACATCGCCAAGGAAG ACGACATTCTTTATCCCCTGGCCGAGCGGGTGCTCCCCGAGGAGGTGCGCGGCGGCATCCTGGCTGGTTACGAATCGGCC GAGGCGCGTACTCCTGCCGATTTTACCGAACGCTACACGAAAGCAGTGGAGCACTACGAGGCGGAAGAACAGAACCGGGC CGCCTGA
Upstream 100 bases:
>100_bases GTCTCGACATCATGGTACAGCAGGCCCTGGCCAAGGCGGGAAACCCGGTGCCGCTGGAAACCATCATCATCGGCATCGAC GGCGAAAGGAGGAACTGACC
Downstream 100 bases:
>100_bases CCGGAACGCACCGTCACCAGCCCGAAGACGAAAAAAGGGAACCCTCCGGGGCTCCCTCTTTTCGTCTTCGTTATCCACGC CGCAACCGCTGCGCGCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKRNITQTLVDEHKLILRMLDVLERNASLTAEGLYTNYRFYLDAVDFIRHYADRFHHAKEEDVLFEALVNNGMPRENSPV AAMLMEHDRGRAYVKAMEEAATAALAGSTGRDGDIAENALGYLIMLREHIAKEDDILYPLAERVLPEEVRGGILAGYESA EARTPADFTERYTKAVEHYEAEEQNRAA
Sequences:
>Translated_188_residues MKRNITQTLVDEHKLILRMLDVLERNASLTAEGLYTNYRFYLDAVDFIRHYADRFHHAKEEDVLFEALVNNGMPRENSPV AAMLMEHDRGRAYVKAMEEAATAALAGSTGRDGDIAENALGYLIMLREHIAKEDDILYPLAERVLPEEVRGGILAGYESA EARTPADFTERYTKAVEHYEAEEQNRAA >Mature_188_residues MKRNITQTLVDEHKLILRMLDVLERNASLTAEGLYTNYRFYLDAVDFIRHYADRFHHAKEEDVLFEALVNNGMPRENSPV AAMLMEHDRGRAYVKAMEEAATAALAGSTGRDGDIAENALGYLIMLREHIAKEDDILYPLAERVLPEEVRGGILAGYESA EARTPADFTERYTKAVEHYEAEEQNRAA
Specific function: Unknown
COG id: COG3945
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21332; Mature: 21332
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNITQTLVDEHKLILRMLDVLERNASLTAEGLYTNYRFYLDAVDFIRHYADRFHHAKE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EDVLFEALVNNGMPRENSPVAAMLMEHDRGRAYVKAMEEAATAALAGSTGRDGDIAENAL HHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH GYLIMLREHIAKEDDILYPLAERVLPEEVRGGILAGYESAEARTPADFTERYTKAVEHYE HHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHH AEEQNRAA HHHHCCCC >Mature Secondary Structure MKRNITQTLVDEHKLILRMLDVLERNASLTAEGLYTNYRFYLDAVDFIRHYADRFHHAKE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EDVLFEALVNNGMPRENSPVAAMLMEHDRGRAYVKAMEEAATAALAGSTGRDGDIAENAL HHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH GYLIMLREHIAKEDDILYPLAERVLPEEVRGGILAGYESAEARTPADFTERYTKAVEHYE HHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHH AEEQNRAA HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA