Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997754
Identifier: 39997754
GI number: 39997754
Start: 2931669
End: 2932124
Strand: Direct
Name: 39997754
Synonym: GSU2660
Alternate gene names: NA
Gene position: 2931669-2932124 (Clockwise)
Preceding gene: 39997753
Following gene: 39997755
Centisome position: 76.86
GC content: 62.28
Gene sequence:
>456_bases ATGTCACATCTCGGTTGCGGCTGCCCCGGCAGCATGGCTCGCGTCATCGAAAGGGAAGAAACCACCACCAACGACACCGC CCGGACCCCGTCGGCACTTCGCCAGTGGCCGGTCCAGCTCCACCTGGTTCCCCCCTCGGCCCCCTATTTCAGGAATGCGG ACATCCTGATCTCGGCAGATTGCGTCGCCTTTGCCCTCGGCTCCTTCCATCAGGACCTGCTCAAGGGGAAGGCACTGGCC ATCGCGTGCCCCAAACTGGACGAGACCGGCACCTACGTGGACAAACTGGCCACCATCTTCCGCAACAATGACGTTAAAAG CGTCACCGTGGCCATCATGGAGGTCCCCTGCTGCCGCGGTCTCGACATCATGGTACAGCAGGCCCTGGCCAAGGCGGGAA ACCCGGTGCCGCTGGAAACCATCATCATCGGCATCGACGGCGAAAGGAGGAACTGA
Upstream 100 bases:
>100_bases AAAGAGGATGAGGCGGGGATCGAAGCGGAAATAAATGACTACCTGACCAGCAAAGCGGCTTAAACCAAACCTACTCAATA CACGAAAAGGAGAACACACC
Downstream 100 bases:
>100_bases CCATGAAGCGCAACATCACCCAGACCCTGGTTGACGAGCACAAACTGATCCTCCGGATGCTTGACGTACTCGAGCGCAAC GCCTCTCTGACGGCGGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSHLGCGCPGSMARVIEREETTTNDTARTPSALRQWPVQLHLVPPSAPYFRNADILISADCVAFALGSFHQDLLKGKALA IACPKLDETGTYVDKLATIFRNNDVKSVTVAIMEVPCCRGLDIMVQQALAKAGNPVPLETIIIGIDGERRN
Sequences:
>Translated_151_residues MSHLGCGCPGSMARVIEREETTTNDTARTPSALRQWPVQLHLVPPSAPYFRNADILISADCVAFALGSFHQDLLKGKALA IACPKLDETGTYVDKLATIFRNNDVKSVTVAIMEVPCCRGLDIMVQQALAKAGNPVPLETIIIGIDGERRN >Mature_150_residues SHLGCGCPGSMARVIEREETTTNDTARTPSALRQWPVQLHLVPPSAPYFRNADILISADCVAFALGSFHQDLLKGKALAI ACPKLDETGTYVDKLATIFRNNDVKSVTVAIMEVPCCRGLDIMVQQALAKAGNPVPLETIIIGIDGERRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16333; Mature: 16202
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLGCGCPGSMARVIEREETTTNDTARTPSALRQWPVQLHLVPPSAPYFRNADILISAD CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCEEEEHH CVAFALGSFHQDLLKGKALAIACPKLDETGTYVDKLATIFRNNDVKSVTVAIMEVPCCRG HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCC LDIMVQQALAKAGNPVPLETIIIGIDGERRN HHHHHHHHHHHCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure SHLGCGCPGSMARVIEREETTTNDTARTPSALRQWPVQLHLVPPSAPYFRNADILISAD CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCEEEEHH CVAFALGSFHQDLLKGKALAIACPKLDETGTYVDKLATIFRNNDVKSVTVAIMEVPCCRG HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCC LDIMVQQALAKAGNPVPLETIIIGIDGERRN HHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]