Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997677
Identifier: 39997677
GI number: 39997677
Start: 2844240
End: 2845544
Strand: Direct
Name: 39997677
Synonym: GSU2582
Alternate gene names: NA
Gene position: 2844240-2845544 (Clockwise)
Preceding gene: 39997662
Following gene: 39997682
Centisome position: 74.57
GC content: 60.38
Gene sequence:
>1305_bases ATGCCCCTCCCGCTGTTGTGTTACTGTACCCTGCTGTTCAGGCCGTTCTTAGTACTTCGGATAGAAGCGGAGCACGAACT GGTTCGGGGTCGGCCAGGAGGCGTTCAGCTTGTTGACCGTGATGTAGTAGTTGACGCCCAGGTTGGCCAGGTCTTCGATG GGGCCGGTCAGGTACAGCCGGTTGGACTGCCAGGACGCCAGCACGTCGGCCGGAACCGGCTTCTTGATGCCGTCCGAGGG ATAGGGAAGGCCGTTGGCGTCCAGGCCGGCCTGGCTGCGGTAGGTCACCCAGGTCCCTTCGCAGTAACCCGTTTCCGCGA CCGGATCGGTTACCACGAAGTTGCCGTCGCAGTTGGCCATCAGCAGGTTGTCGGTGTTGATGTTGTCGTCGTTGTCATAG TAGTAGGCCCAGGGCACGCTGGACAGGTTGTTCCAGTCGCCGAACAGCGCATAGTAGTTGGAGGAGATCAAGCCGGTGTC GAGCCCGTCTTCCGTGGCGTTGAGCAGGTAGCTGAAGCGATACTTCGGATCGAAGTAACCGGTGCTCGGATGATTGGCGT CGGCGGGCCCGGCCAGCCCCTGGGCGAACAGGGCCGACAGGACTTCGGCGGACTGAACGGCGGACGAGGTGGTGGTGAAG AATCTCCCTTTCTTGTCGGTGAAGCCGAGGCCGTCACCGGCCTTGGACTTGGTGAACACGCCGTTCACCATGAAGCCCAG CTCGGCCCGGAAGCCTTTCCACTTCTTCACGTCGCCGTCGGTCAGCTTCTGCATGGAGTTGTAGATGCTGGTATAGGTGT CGGTCGCCACCTTGAAATACACGTCGATGGGCTGGCCGTTGGTCCCCTTCACTTTCCAGCGCTTGCTGGACTGGAGCGGG TCCGAGCACATCTTGTCGGAGAAGTCGTAGGGGTTGTAGCCGGTGGTCATGATGCACTTGAGACCGGTCACGTCGTCCTT GTTGACGACCTTCATGCCGGGCGCCTTGACGTCGGTCTCTTTCCAGGTGATCACGCCGTTCGTGGTAGTCTTGGCCGGGC TGGTGAAGAGGGTGCTGGTGTAGGTCACATACTCGGTATAGGGGGCAGGCGCCACCGTCACGTTGCTCATGTCCCACCCG GTGATGGTGCCGGCCCAGGCGGCCGAAGCGGCAACAGACAACGATACTCCCAGCAGTGCGGACAGCTTCTTTGCAGTTTT GCTTCTCGACATGATGTTCTCCTTTTCTTCGTGTGGTTGAGGTTGCTTCGTGCACTTCCTTGCGCGGGGGAAGCGAATAT CGCGCCCCCCTGCTGCTTCCAATGA
Upstream 100 bases:
>100_bases ACGGGGAACATCCCCTCATGACCGTCTACATCCGGATCCCAACTCACGCCCATGTGCCCCCGCTACGTCCGGCTCACAAT GCACAAAGCGGGAGGAGCCA
Downstream 100 bases:
>100_bases AAAACCCTTTCCAGCACCCTCCTTTCCGGTGTGCGACCGAATTCTCCAGTTCTGACAGGCGCCGGGCCGGGGCGCGACTC ACGCTGCCCGGCGGCTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MPLPLLCYCTLLFRPFLVLRIEAEHELVRGRPGGVQLVDRDVVVDAQVGQVFDGAGQVQPVGLPGRQHVGRNRLLDAVRG IGKAVGVQAGLAAVGHPGPFAVTRFRDRIGYHEVAVAVGHQQVVGVDVVVVVIVVGPGHAGQVVPVAEQRIVVGGDQAGV EPVFRGVEQVAEAILRIEVTGARMIGVGGPGQPLGEQGRQDFGGLNGGRGGGEESPFLVGEAEAVTGLGLGEHAVHHEAQ LGPEAFPLLHVAVGQLLHGVVDAGIGVGRHLEIHVDGLAVGPLHFPALAGLERVRAHLVGEVVGVVAGGHDALETGHVVL VDDLHAGRLDVGLFPGDHAVRGSLGRAGEEGAGVGHILGIGGRRHRHVAHVPPGDGAGPGGRSGNRQRYSQQCGQLLCSF ASRHDVLLFFVWLRLLRALPCAGEANIAPPCCFQ
Sequences:
>Translated_434_residues MPLPLLCYCTLLFRPFLVLRIEAEHELVRGRPGGVQLVDRDVVVDAQVGQVFDGAGQVQPVGLPGRQHVGRNRLLDAVRG IGKAVGVQAGLAAVGHPGPFAVTRFRDRIGYHEVAVAVGHQQVVGVDVVVVVIVVGPGHAGQVVPVAEQRIVVGGDQAGV EPVFRGVEQVAEAILRIEVTGARMIGVGGPGQPLGEQGRQDFGGLNGGRGGGEESPFLVGEAEAVTGLGLGEHAVHHEAQ LGPEAFPLLHVAVGQLLHGVVDAGIGVGRHLEIHVDGLAVGPLHFPALAGLERVRAHLVGEVVGVVAGGHDALETGHVVL VDDLHAGRLDVGLFPGDHAVRGSLGRAGEEGAGVGHILGIGGRRHRHVAHVPPGDGAGPGGRSGNRQRYSQQCGQLLCSF ASRHDVLLFFVWLRLLRALPCAGEANIAPPCCFQ >Mature_433_residues PLPLLCYCTLLFRPFLVLRIEAEHELVRGRPGGVQLVDRDVVVDAQVGQVFDGAGQVQPVGLPGRQHVGRNRLLDAVRGI GKAVGVQAGLAAVGHPGPFAVTRFRDRIGYHEVAVAVGHQQVVGVDVVVVVIVVGPGHAGQVVPVAEQRIVVGGDQAGVE PVFRGVEQVAEAILRIEVTGARMIGVGGPGQPLGEQGRQDFGGLNGGRGGGEESPFLVGEAEAVTGLGLGEHAVHHEAQL GPEAFPLLHVAVGQLLHGVVDAGIGVGRHLEIHVDGLAVGPLHFPALAGLERVRAHLVGEVVGVVAGGHDALETGHVVLV DDLHAGRLDVGLFPGDHAVRGSLGRAGEEGAGVGHILGIGGRRHRHVAHVPPGDGAGPGGRSGNRQRYSQQCGQLLCSFA SRHDVLLFFVWLRLLRALPCAGEANIAPPCCFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45002; Mature: 44871
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPLLCYCTLLFRPFLVLRIEAEHELVRGRPGGVQLVDRDVVVDAQVGQVFDGAGQVQP CCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCCCCEEEECCEEEECHHHHHHCCCCCEEE VGLPGRQHVGRNRLLDAVRGIGKAVGVQAGLAAVGHPGPFAVTRFRDRIGYHEVAVAVGH CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHEEECC QQVVGVDVVVVVIVVGPGHAGQVVPVAEQRIVVGGDQAGVEPVFRGVEQVAEAILRIEVT CHHCCEEEEEEEEEECCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEC GARMIGVGGPGQPLGEQGRQDFGGLNGGRGGGEESPFLVGEAEAVTGLGLGEHAVHHEAQ CCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCHHHCCCCCCHHHHHHHHH LGPEAFPLLHVAVGQLLHGVVDAGIGVGRHLEIHVDGLAVGPLHFPALAGLERVRAHLVG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHHH EVVGVVAGGHDALETGHVVLVDDLHAGRLDVGLFPGDHAVRGSLGRAGEEGAGVGHILGI HHHHHHCCCCHHHHCCCEEEEECCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCEEEEEC GGRRHRHVAHVPPGDGAGPGGRSGNRQRYSQQCGQLLCSFASRHDVLLFFVWLRLLRALP CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC CAGEANIAPPCCFQ CCCCCCCCCCCCCC >Mature Secondary Structure PLPLLCYCTLLFRPFLVLRIEAEHELVRGRPGGVQLVDRDVVVDAQVGQVFDGAGQVQP CCHHHHHHHHHHCCEEEEEECCCHHHHCCCCCCCEEEECCEEEECHHHHHHCCCCCEEE VGLPGRQHVGRNRLLDAVRGIGKAVGVQAGLAAVGHPGPFAVTRFRDRIGYHEVAVAVGH CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHEEECC QQVVGVDVVVVVIVVGPGHAGQVVPVAEQRIVVGGDQAGVEPVFRGVEQVAEAILRIEVT CHHCCEEEEEEEEEECCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEC GARMIGVGGPGQPLGEQGRQDFGGLNGGRGGGEESPFLVGEAEAVTGLGLGEHAVHHEAQ CCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCHHHCCCCCCHHHHHHHHH LGPEAFPLLHVAVGQLLHGVVDAGIGVGRHLEIHVDGLAVGPLHFPALAGLERVRAHLVG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHHH EVVGVVAGGHDALETGHVVLVDDLHAGRLDVGLFPGDHAVRGSLGRAGEEGAGVGHILGI HHHHHHCCCCHHHHCCCEEEEECCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCEEEEEC GGRRHRHVAHVPPGDGAGPGGRSGNRQRYSQQCGQLLCSFASRHDVLLFFVWLRLLRALP CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC CAGEANIAPPCCFQ CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA