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The map label for this gene is bphB [H]

Identifier: 39997662

GI number: 39997662

Start: 2827974

End: 2829725

Strand: Direct

Name: bphB [H]

Synonym: GSU2567

Alternate gene names: 39997662

Gene position: 2827974-2829725 (Clockwise)

Preceding gene: 39997660

Following gene: 39997677

Centisome position: 74.14

GC content: 64.61

Gene sequence:

>1752_bases
GTGCCGATGGCCGTCCTTTCCATCTACAACCACTACGAAATACTCAAGCGGGAAATCGACGACCTGAAAGGCCGCAATTT
CTCGGCGGCCACGCACGTGGCTGTGGAAGTGGACCGGTTGATCACCGAGACCACCGGCGTTCTGCGGGTCCTGTCGCGCC
ATCCCACGGTCGTCGCCTGCGAACCGGCGGCCATGGACCGGCTATTCGCGAAACTGCTCCCCTCCTATCCCATGCGGCTC
AACATCCTGGCGGCCGATATGGCCGGAAACAATGTGGGCTCCGGCGTCTCCTCCCCCACCGTGCACACCCTGAACTACAA
CGACAAGGAGTGGTACCAGCGGGCGCGCAGGGGCGCCTACATCATCGGCGATCTCCACGTATCCAAACTCTTCAAGCGCC
CTGCCGTCATGATCGCAGGACCGGTCATGGACGATCATTCCCGCCAGGTGGGGGTTGTGGGCATCCCCATCGACCTGAAC
GCCATCTCCAAACACCTGGCCGTATCCACCAACCGCCTTGCCAACAATACCGACATTCTGGTGCTGGACCGCAAGGGGGG
CATCATGATGGACACCCGCTCACCGGAACGGATCGGGCGCAATATCACCGACACCGCCCTCAAGTGCCCCGGAGAGGTGA
TCACCCCCGGCTTCACCACGGTCTGCCGGGGAAGCGACGGGGTTGAGCGGATCATCAGCGTGGCCAAAGTGGGAAACCAC
GGCTGGCACGCCCTGGTCTCCATGCCCCTGTCCGAGGCCCGCAGCTTTGCGCTCCTGGTGAGCCGCAAGGCCCTGTCCGC
GGCCCTGATCGCAGGGCTCATCGCCATGTTCCCGGCCGTCAGGCTCGTCAGGTCCATCCTCGGCAGCCTGCAGGAACTGG
TCGCCGCCATGGGTGAGGTCGAACGGGGCAACCTGACCTACAAGCTCCATTTCTCGGCCCGGGACGAGCTGGAAACCATC
GCCTCCTCGTTCAACGCCATGGCCCAGCGGCTGAGGGCCAGCGAAGAGACCCTCACGGCACTCAACGCCGAGCTGGAAGA
ACGGGTCCTCCAGCGCACCGCCGATCTCGAGGCCATGAACCGGGAACTGGAATCGTTCAGCTACTCGGTTTCCCACGACC
TGCGGGCCCCCCTGCGCCACCTGGAGGGATTCAGCGAAGCCCTGCTCGAGGACTACGCCGACCACCTCGACGAGAACGGC
CGGCACTGCCTGGAGCGGATCAACGGGGCCAGCCGGCGCCTCTCGCAGATGATCGACGCCATGCTGGAGCTGTCGCGTCT
CAGCAGGAGCGACCTGCAGCGCGAACGGATCGACCTGGGCGCCATGGCCCGCGACATCCTTGACGAGTTGCACGGCACCG
AACCGGAGCGGCGGGTGTCGGTAAAAATCAGTGATGCCATGGAGGCAGAGGGGGATGCACGGCTGGTGCGGGTGGTGATG
GAAAACCTGGTGGGCAACGCCTGGAAGTACAGCCGCACCCGGCAAGAGGCGGCAATCGAGATCGGCACCCGACAGGACGG
GGCAACGACCATCTACTACGTGCGCGACAACGGCGTCGGTTTCGACATGGCCTACGCGGACCGGCTCTTCGCCCCCTTCC
AAAGGCTGCACCGGGAGGATGAATTCGAGGGAACCGGCGTGGGGCTCGCCACGGTCCAGCGGATCGTTCACCGGCACGGC
GGCCGGCTGTGGGCCGAGGCAGCCCCCGACAACGGAGCAACGTTCTTCTTTACCTTGGGAACCTGTTCGTAA

Upstream 100 bases:

>100_bases
CCCGACAGCTCTCCAGGACGCATCAGCGGGAGGCAGCCCCATGACTCTTCCCTTCCTGACCATCAGGATCAAGCTTATCT
CCATCATCGGGTTCTTCCTG

Downstream 100 bases:

>100_bases
CTGCTGTTTCAGCAGATCGTGCCCGGATTTATGACGGATTTGGCCGGATCGATTGAGTAGCGCCGCAGGCGTAGCAGGGC
TTCGTCGAGGACGGTACGAT

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 582

Protein sequence:

>583_residues
MPMAVLSIYNHYEILKREIDDLKGRNFSAATHVAVEVDRLITETTGVLRVLSRHPTVVACEPAAMDRLFAKLLPSYPMRL
NILAADMAGNNVGSGVSSPTVHTLNYNDKEWYQRARRGAYIIGDLHVSKLFKRPAVMIAGPVMDDHSRQVGVVGIPIDLN
AISKHLAVSTNRLANNTDILVLDRKGGIMMDTRSPERIGRNITDTALKCPGEVITPGFTTVCRGSDGVERIISVAKVGNH
GWHALVSMPLSEARSFALLVSRKALSAALIAGLIAMFPAVRLVRSILGSLQELVAAMGEVERGNLTYKLHFSARDELETI
ASSFNAMAQRLRASEETLTALNAELEERVLQRTADLEAMNRELESFSYSVSHDLRAPLRHLEGFSEALLEDYADHLDENG
RHCLERINGASRRLSQMIDAMLELSRLSRSDLQRERIDLGAMARDILDELHGTEPERRVSVKISDAMEAEGDARLVRVVM
ENLVGNAWKYSRTRQEAAIEIGTRQDGATTIYYVRDNGVGFDMAYADRLFAPFQRLHREDEFEGTGVGLATVQRIVHRHG
GRLWAEAAPDNGATFFFTLGTCS

Sequences:

>Translated_583_residues
MPMAVLSIYNHYEILKREIDDLKGRNFSAATHVAVEVDRLITETTGVLRVLSRHPTVVACEPAAMDRLFAKLLPSYPMRL
NILAADMAGNNVGSGVSSPTVHTLNYNDKEWYQRARRGAYIIGDLHVSKLFKRPAVMIAGPVMDDHSRQVGVVGIPIDLN
AISKHLAVSTNRLANNTDILVLDRKGGIMMDTRSPERIGRNITDTALKCPGEVITPGFTTVCRGSDGVERIISVAKVGNH
GWHALVSMPLSEARSFALLVSRKALSAALIAGLIAMFPAVRLVRSILGSLQELVAAMGEVERGNLTYKLHFSARDELETI
ASSFNAMAQRLRASEETLTALNAELEERVLQRTADLEAMNRELESFSYSVSHDLRAPLRHLEGFSEALLEDYADHLDENG
RHCLERINGASRRLSQMIDAMLELSRLSRSDLQRERIDLGAMARDILDELHGTEPERRVSVKISDAMEAEGDARLVRVVM
ENLVGNAWKYSRTRQEAAIEIGTRQDGATTIYYVRDNGVGFDMAYADRLFAPFQRLHREDEFEGTGVGLATVQRIVHRHG
GRLWAEAAPDNGATFFFTLGTCS
>Mature_582_residues
PMAVLSIYNHYEILKREIDDLKGRNFSAATHVAVEVDRLITETTGVLRVLSRHPTVVACEPAAMDRLFAKLLPSYPMRLN
ILAADMAGNNVGSGVSSPTVHTLNYNDKEWYQRARRGAYIIGDLHVSKLFKRPAVMIAGPVMDDHSRQVGVVGIPIDLNA
ISKHLAVSTNRLANNTDILVLDRKGGIMMDTRSPERIGRNITDTALKCPGEVITPGFTTVCRGSDGVERIISVAKVGNHG
WHALVSMPLSEARSFALLVSRKALSAALIAGLIAMFPAVRLVRSILGSLQELVAAMGEVERGNLTYKLHFSARDELETIA
SSFNAMAQRLRASEETLTALNAELEERVLQRTADLEAMNRELESFSYSVSHDLRAPLRHLEGFSEALLEDYADHLDENGR
HCLERINGASRRLSQMIDAMLELSRLSRSDLQRERIDLGAMARDILDELHGTEPERRVSVKISDAMEAEGDARLVRVVME
NLVGNAWKYSRTRQEAAIEIGTRQDGATTIYYVRDNGVGFDMAYADRLFAPFQRLHREDEFEGTGVGLATVQRIVHRHGG
RLWAEAAPDNGATFFFTLGTCS

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789149, Length=338, Percent_Identity=26.6272189349112, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI87081816, Length=378, Percent_Identity=26.4550264550265, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790346, Length=228, Percent_Identity=29.8245614035088, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787894, Length=325, Percent_Identity=27.3846153846154, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786912, Length=254, Percent_Identity=29.9212598425197, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1788549, Length=214, Percent_Identity=27.5700934579439, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI48994928, Length=238, Percent_Identity=23.9495798319328, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1790551, Length=326, Percent_Identity=24.5398773006135, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI145693157, Length=248, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1786600, Length=221, Percent_Identity=26.2443438914027, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786783, Length=334, Percent_Identity=23.3532934131737, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=26.1261261261261, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 64573; Mature: 64441

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMAVLSIYNHYEILKREIDDLKGRNFSAATHVAVEVDRLITETTGVLRVLSRHPTVVAC
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
EPAAMDRLFAKLLPSYPMRLNILAADMAGNNVGSGVSSPTVHTLNYNDKEWYQRARRGAY
CHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCEE
IIGDLHVSKLFKRPAVMIAGPVMDDHSRQVGVVGIPIDLNAISKHLAVSTNRLANNTDIL
EEEHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEE
VLDRKGGIMMDTRSPERIGRNITDTALKCPGEVITPGFTTVCRGSDGVERIISVAKVGNH
EEECCCCEEEECCCHHHHCCCCCHHHHHCCCCEECCCCHHEECCCHHHHHHHHHHHCCCC
GWHALVSMPLSEARSFALLVSRKALSAALIAGLIAMFPAVRLVRSILGSLQELVAAMGEV
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ERGNLTYKLHFSARDELETIASSFNAMAQRLRASEETLTALNAELEERVLQRTADLEAMN
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RELESFSYSVSHDLRAPLRHLEGFSEALLEDYADHLDENGRHCLERINGASRRLSQMIDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHH
MLELSRLSRSDLQRERIDLGAMARDILDELHGTEPERRVSVKISDAMEAEGDARLVRVVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHH
ENLVGNAWKYSRTRQEAAIEIGTRQDGATTIYYVRDNGVGFDMAYADRLFAPFQRLHRED
HHHHCCCHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
EFEGTGVGLATVQRIVHRHGGRLWAEAAPDNGATFFFTLGTCS
CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCC
>Mature Secondary Structure 
PMAVLSIYNHYEILKREIDDLKGRNFSAATHVAVEVDRLITETTGVLRVLSRHPTVVAC
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
EPAAMDRLFAKLLPSYPMRLNILAADMAGNNVGSGVSSPTVHTLNYNDKEWYQRARRGAY
CHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCEE
IIGDLHVSKLFKRPAVMIAGPVMDDHSRQVGVVGIPIDLNAISKHLAVSTNRLANNTDIL
EEEHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEE
VLDRKGGIMMDTRSPERIGRNITDTALKCPGEVITPGFTTVCRGSDGVERIISVAKVGNH
EEECCCCEEEECCCHHHHCCCCCHHHHHCCCCEECCCCHHEECCCHHHHHHHHHHHCCCC
GWHALVSMPLSEARSFALLVSRKALSAALIAGLIAMFPAVRLVRSILGSLQELVAAMGEV
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ERGNLTYKLHFSARDELETIASSFNAMAQRLRASEETLTALNAELEERVLQRTADLEAMN
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RELESFSYSVSHDLRAPLRHLEGFSEALLEDYADHLDENGRHCLERINGASRRLSQMIDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHH
MLELSRLSRSDLQRERIDLGAMARDILDELHGTEPERRVSVKISDAMEAEGDARLVRVVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHH
ENLVGNAWKYSRTRQEAAIEIGTRQDGATTIYYVRDNGVGFDMAYADRLFAPFQRLHRED
HHHHCCCHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
EFEGTGVGLATVQRIVHRHGGRLWAEAAPDNGATFFFTLGTCS
CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]