Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997493
Identifier: 39997493
GI number: 39997493
Start: 2630792
End: 2631034
Strand: Direct
Name: 39997493
Synonym: GSU2398
Alternate gene names: NA
Gene position: 2630792-2631034 (Clockwise)
Preceding gene: 39997492
Following gene: 39997494
Centisome position: 68.97
GC content: 52.26
Gene sequence:
>243_bases ATGTCTGAGGCCGAGTTAGCCGGACGCGCTGGTATAGCCCGCCGGACATTGCAAAGAATCGAACGCGGCGATCCTGGGTG TGCAATCGGATTATTTTTCGAACTGGCTGTCTTAGTGGGGGTGACGTTGTTTGACTCTGACGACCGTTCCACTATTACTA TGCATTTAGATCGGGTGAACGACAGGCTCGCAGTCCTGCCCAGCCGGATCAGGTCTTCGACAAAGGTTCATGATGAATTC TAA
Upstream 100 bases:
>100_bases ACGTATGCCATCATCACAAAACAGAACGTACCTCCCTGCTACCCGCGAGGCGACGGAACTCCTCGGCAAGCTAATCCGAC TGGAGCGGCGGGAGCGCAGG
Downstream 100 bases:
>100_bases TCTAACAGAGCTATATGTCTGGATCTGGCTTCCGAACGAGACAGAACCGGTTGTTGCAGGGAGACTCGCGGCGCAGGGGC GGACCTACATCTTTAACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSEAELAGRAGIARRTLQRIERGDPGCAIGLFFELAVLVGVTLFDSDDRSTITMHLDRVNDRLAVLPSRIRSSTKVHDEF
Sequences:
>Translated_80_residues MSEAELAGRAGIARRTLQRIERGDPGCAIGLFFELAVLVGVTLFDSDDRSTITMHLDRVNDRLAVLPSRIRSSTKVHDEF >Mature_79_residues SEAELAGRAGIARRTLQRIERGDPGCAIGLFFELAVLVGVTLFDSDDRSTITMHLDRVNDRLAVLPSRIRSSTKVHDEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8871; Mature: 8740
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAELAGRAGIARRTLQRIERGDPGCAIGLFFELAVLVGVTLFDSDDRSTITMHLDRVN CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC DRLAVLPSRIRSSTKVHDEF CHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEAELAGRAGIARRTLQRIERGDPGCAIGLFFELAVLVGVTLFDSDDRSTITMHLDRVN CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC DRLAVLPSRIRSSTKVHDEF CHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA