Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997492
Identifier: 39997492
GI number: 39997492
Start: 2630204
End: 2630419
Strand: Direct
Name: 39997492
Synonym: GSU2397
Alternate gene names: NA
Gene position: 2630204-2630419 (Clockwise)
Preceding gene: 39997491
Following gene: 39997493
Centisome position: 68.96
GC content: 51.39
Gene sequence:
>216_bases ATGACCAGAATTGCACGCGTCATAGCAACGGGAATTCCCCATCATGTTACGCAACGGGGCAACCGAAGAATGCCAACATT CTTCAATGATGAGGATTACCGAGCATATATCGCTCTGCTCGGCGAATGGTGCCGGAAATGTGGCGTAGATAGCCCCGGCA CCCAGGTTACACGTGTTAAAGATTTGAGTCGTTCCCTGAAAGGTGGCTTGCCGTGA
Upstream 100 bases:
>100_bases AGCGAGAGGACCCCACCTGAAATGGAAGAGGAAAGAATTCTGGGGACACCATACTTAATTACCTATTGACAAGCGCATTA ACCATCACCAACGTGCCTCC
Downstream 100 bases:
>100_bases AAAGCTTCATGATTAGATATGCCATGACGGTGTCAGCAGGCATGTTTTGCGTGTTGGGCTTGCTGATGGCCGGCGATCGG CTCTTAGAGCCTGTTACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MTRIARVIATGIPHHVTQRGNRRMPTFFNDEDYRAYIALLGEWCRKCGVDSPGTQVTRVKDLSRSLKGGLP
Sequences:
>Translated_71_residues MTRIARVIATGIPHHVTQRGNRRMPTFFNDEDYRAYIALLGEWCRKCGVDSPGTQVTRVKDLSRSLKGGLP >Mature_70_residues TRIARVIATGIPHHVTQRGNRRMPTFFNDEDYRAYIALLGEWCRKCGVDSPGTQVTRVKDLSRSLKGGLP
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8015; Mature: 7884
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIARVIATGIPHHVTQRGNRRMPTFFNDEDYRAYIALLGEWCRKCGVDSPGTQVTRVK CHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH DLSRSLKGGLP HHHHHHCCCCC >Mature Secondary Structure TRIARVIATGIPHHVTQRGNRRMPTFFNDEDYRAYIALLGEWCRKCGVDSPGTQVTRVK HHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH DLSRSLKGGLP HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA