Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is htpG [H]
Identifier: 39997485
GI number: 39997485
Start: 2620678
End: 2622630
Strand: Direct
Name: htpG [H]
Synonym: GSU2390
Alternate gene names: 39997485
Gene position: 2620678-2622630 (Clockwise)
Preceding gene: 39997465
Following gene: 39997490
Centisome position: 68.71
GC content: 62.52
Gene sequence:
>1953_bases ATGAGCAAGACCGTCAAGAAATTCGAAACCGAAGTCCAGCAGCTCCTGGACCTCGTGATCCACTCCCTCTACTCCAACAA GGACATCTTCCTGCGGGAGCTCATCTCCAACGCCTCCGACGCCATCGACAAAGTCCTCTTCGAGTCCCACCAGAACGCGG CGGTCATCGAGGGCGAGCCCGAAGGGAAGATCAAGCTGATCCCCGACAAGGATGCCGGCACCCTTACCATCCGCGACAAC GGGGTCGGCATGACCCTGGAGGAAGTGGAGAAGAACATCGGCACCATCGCCCATTCGGGCACCAAGGCATTCCTGGCCAA CCTGAAGGAGCAGAACGTGGCCGACCACCCGGAGCTGATCGGCCAGTTCGGGGTCGGCTTCTACGCCTCGTTCATGGTGG CCGACCGGGTCACCCTCGTCACCCGCCGGGCCGGCCACGACAAGGCGGCCGGGGTCCGCTGGGAGTCCACCGGCGACGGC ACCTACACCGTGGAGGAATGCGCCAAAGAGACCCGCGGCACCGAGATCACCCTCCACCTGAAAGAAGAGATGAAGGAATA CCTGGACGAGTGGAAGATCCGCTCCATCGTCCGCAAGTACTCCGACTACGTCCAGTACCCCATCGTCATGGACGTGACCC GCACCGAAGTGCCCAAGGGGGTGAACGGCGAAGAGATCGAAGGGGCCGGCACCATCGAGAAGACCGAAGAGGAAACCCTC AACTCCATGAAGGCCATCTGGACCCGCTCCAAAAGCGAGGTGACCGAGGAGGAGTACGAGGAGTTCTACAAGCACGTCTC CCACGACTTTGAAAAGCCGCTGAAGACCATCCACTACTCGGCCGAGGGGACCAGCGAGTTCAAGGCCCTCCTCTACCTGC CGGCCCACAAGCCCTTCGACCTCTTCATGCCCGAGCGCAAGAAAGGGGTCCAGCTCTACGTGCGCCGGGTCTTCATCACC GACTCCTGCGAACAGCTCCTCCCCGACTACCTCCGCTTCGTCAAGGGAGTGGTGGACTCCAGCGACCTGCCCCTCAACGT CTCCCGCGAGATCCTGCAGGAGGACGTGCAGATCAAGCGCATCCAGAAGAGCCTCGTCTCCAAGATCCTCTCAACCCTCT CCGAGATGAGGGAAAAAGAGGCCGACAGCTACCTGGACTTCTACAAGGAGTTCGGCCCGGTCCTCAAGGAAGGGGTCCAC TTCGACTACGCCAACCGGGACAAGCTCCAGGACCTTCTCCTGTTCGAGAGCACCGCCACCGACGCGGGTTCGTTCGTCTC CCTCAAGGAATACGTGGAGCGGATGCCCGAGGGGCAGGAAGAGATCTACTTCATCACCGGCACCAGCCGGGCGGCCCTGG AGCAGTCGCCGCACCTGGAGATCTTCCGCAAGAAGGGGTACGAAGTCCTGTTCCTGACCGATCCGGTGGACGAGTGGGTG GTGCAGGGGCTGCCGGAATACGGCGGCAAAAAGCTCAAGGCCGTTGACCGGGGCGACGTGATCCCCGCCACCGAAGAAGA GAAAAAAGAGCAGGAAGCCAAGCGGGAAGAGGCGGCCAAGCAGTACGGCGACCTCCTCTCCTTCGTAAAGGAGAAGCTGG CCGAGCGGGTGAAAGAAGTGCGGCTCTCCAACCGCCTCACCGACAGCGCCTGCTGCCTGGTGGCCGACGAGCACGGCCTC AACGCCAACATGGAGCGGATTCTCCGGGCCATGAACCAGACCGTGCCCGAGTCCAAGCGAATCCTGGAGCTGAACCCGGA CCACCCCATCATGCAGGTCATGGCCACCCTCTTCGGCAAGGACAAGACCAACCCGCGCCTGGCCGACTACTGCGACCTCC TCTACGACCAGGCCCTGCTCACCGAGGGATCGCCCATCGCCGACCCGCTCCGGTTCACCCGCCTCGTTGCCGAGCTGATG GTGGCGGACGGCAAGGCCGCCGCGGGAGAATAG
Upstream 100 bases:
>100_bases AAACACTACTCCGTCGCATCATCCCCCTTGAAATTCGCTCCGACCATGATTAGGTTAAAGACCACGCGCACACCACACCC CAAAGGAGATCACCATCCCC
Downstream 100 bases:
>100_bases GCCGGCAGGCCCCCCTTCCCCGCGCAGTACTCAGCACCAATCCATTCCAGATTCCCGCCATGGGGAGCCGAAGCATCGGC TCCCCTTTTTTCGTTTCTAT
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MSKTVKKFETEVQQLLDLVIHSLYSNKDIFLRELISNASDAIDKVLFESHQNAAVIEGEPEGKIKLIPDKDAGTLTIRDN GVGMTLEEVEKNIGTIAHSGTKAFLANLKEQNVADHPELIGQFGVGFYASFMVADRVTLVTRRAGHDKAAGVRWESTGDG TYTVEECAKETRGTEITLHLKEEMKEYLDEWKIRSIVRKYSDYVQYPIVMDVTRTEVPKGVNGEEIEGAGTIEKTEEETL NSMKAIWTRSKSEVTEEEYEEFYKHVSHDFEKPLKTIHYSAEGTSEFKALLYLPAHKPFDLFMPERKKGVQLYVRRVFIT DSCEQLLPDYLRFVKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVSKILSTLSEMREKEADSYLDFYKEFGPVLKEGVH FDYANRDKLQDLLLFESTATDAGSFVSLKEYVERMPEGQEEIYFITGTSRAALEQSPHLEIFRKKGYEVLFLTDPVDEWV VQGLPEYGGKKLKAVDRGDVIPATEEEKKEQEAKREEAAKQYGDLLSFVKEKLAERVKEVRLSNRLTDSACCLVADEHGL NANMERILRAMNQTVPESKRILELNPDHPIMQVMATLFGKDKTNPRLADYCDLLYDQALLTEGSPIADPLRFTRLVAELM VADGKAAAGE
Sequences:
>Translated_650_residues MSKTVKKFETEVQQLLDLVIHSLYSNKDIFLRELISNASDAIDKVLFESHQNAAVIEGEPEGKIKLIPDKDAGTLTIRDN GVGMTLEEVEKNIGTIAHSGTKAFLANLKEQNVADHPELIGQFGVGFYASFMVADRVTLVTRRAGHDKAAGVRWESTGDG TYTVEECAKETRGTEITLHLKEEMKEYLDEWKIRSIVRKYSDYVQYPIVMDVTRTEVPKGVNGEEIEGAGTIEKTEEETL NSMKAIWTRSKSEVTEEEYEEFYKHVSHDFEKPLKTIHYSAEGTSEFKALLYLPAHKPFDLFMPERKKGVQLYVRRVFIT DSCEQLLPDYLRFVKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVSKILSTLSEMREKEADSYLDFYKEFGPVLKEGVH FDYANRDKLQDLLLFESTATDAGSFVSLKEYVERMPEGQEEIYFITGTSRAALEQSPHLEIFRKKGYEVLFLTDPVDEWV VQGLPEYGGKKLKAVDRGDVIPATEEEKKEQEAKREEAAKQYGDLLSFVKEKLAERVKEVRLSNRLTDSACCLVADEHGL NANMERILRAMNQTVPESKRILELNPDHPIMQVMATLFGKDKTNPRLADYCDLLYDQALLTEGSPIADPLRFTRLVAELM VADGKAAAGE >Mature_649_residues SKTVKKFETEVQQLLDLVIHSLYSNKDIFLRELISNASDAIDKVLFESHQNAAVIEGEPEGKIKLIPDKDAGTLTIRDNG VGMTLEEVEKNIGTIAHSGTKAFLANLKEQNVADHPELIGQFGVGFYASFMVADRVTLVTRRAGHDKAAGVRWESTGDGT YTVEECAKETRGTEITLHLKEEMKEYLDEWKIRSIVRKYSDYVQYPIVMDVTRTEVPKGVNGEEIEGAGTIEKTEEETLN SMKAIWTRSKSEVTEEEYEEFYKHVSHDFEKPLKTIHYSAEGTSEFKALLYLPAHKPFDLFMPERKKGVQLYVRRVFITD SCEQLLPDYLRFVKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVSKILSTLSEMREKEADSYLDFYKEFGPVLKEGVHF DYANRDKLQDLLLFESTATDAGSFVSLKEYVERMPEGQEEIYFITGTSRAALEQSPHLEIFRKKGYEVLFLTDPVDEWVV QGLPEYGGKKLKAVDRGDVIPATEEEKKEQEAKREEAAKQYGDLLSFVKEKLAERVKEVRLSNRLTDSACCLVADEHGLN ANMERILRAMNQTVPESKRILELNPDHPIMQVMATLFGKDKTNPRLADYCDLLYDQALLTEGSPIADPLRFTRLVAELMV ADGKAAAGE
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI154146191, Length=672, Percent_Identity=41.3690476190476, Blast_Score=476, Evalue=1e-134, Organism=Homo sapiens, GI20149594, Length=669, Percent_Identity=40.8071748878924, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI153792590, Length=672, Percent_Identity=41.3690476190476, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI4507677, Length=666, Percent_Identity=39.7897897897898, Blast_Score=439, Evalue=1e-123, Organism=Homo sapiens, GI155722983, Length=650, Percent_Identity=34.1538461538462, Blast_Score=373, Evalue=1e-103, Organism=Escherichia coli, GI1786679, Length=639, Percent_Identity=47.4178403755869, Blast_Score=584, Evalue=1e-168, Organism=Caenorhabditis elegans, GI17559162, Length=656, Percent_Identity=41.6158536585366, Blast_Score=486, Evalue=1e-137, Organism=Caenorhabditis elegans, GI17542208, Length=657, Percent_Identity=38.5083713850837, Blast_Score=411, Evalue=1e-115, Organism=Caenorhabditis elegans, GI115535205, Length=652, Percent_Identity=35.1226993865031, Blast_Score=357, Evalue=1e-98, Organism=Caenorhabditis elegans, GI115535167, Length=437, Percent_Identity=37.7574370709382, Blast_Score=283, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6325016, Length=689, Percent_Identity=39.1872278664732, Blast_Score=464, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6323840, Length=683, Percent_Identity=39.2386530014641, Blast_Score=462, Evalue=1e-131, Organism=Drosophila melanogaster, GI17647529, Length=703, Percent_Identity=41.8207681365576, Blast_Score=510, Evalue=1e-144, Organism=Drosophila melanogaster, GI21357739, Length=678, Percent_Identity=38.2005899705015, Blast_Score=427, Evalue=1e-119, Organism=Drosophila melanogaster, GI24586016, Length=624, Percent_Identity=36.2179487179487, Blast_Score=374, Evalue=1e-103,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 73732; Mature: 73600
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTVKKFETEVQQLLDLVIHSLYSNKDIFLRELISNASDAIDKVLFESHQNAAVIEGEP CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC EGKIKLIPDKDAGTLTIRDNGVGMTLEEVEKNIGTIAHSGTKAFLANLKEQNVADHPELI CCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH GQFGVGFYASFMVADRVTLVTRRAGHDKAAGVRWESTGDGTYTVEECAKETRGTEITLHL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEHHHHHHHHCCCEEEEEH KEEMKEYLDEWKIRSIVRKYSDYVQYPIVMDVTRTEVPKGVNGEEIEGAGTIEKTEEETL HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHH NSMKAIWTRSKSEVTEEEYEEFYKHVSHDFEKPLKTIHYSAEGTSEFKALLYLPAHKPFD HHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCCC LFMPERKKGVQLYVRRVFITDSCEQLLPDYLRFVKGVVDSSDLPLNVSREILQEDVQIKR CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH IQKSLVSKILSTLSEMREKEADSYLDFYKEFGPVLKEGVHFDYANRDKLQDLLLFESTAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC DAGSFVSLKEYVERMPEGQEEIYFITGTSRAALEQSPHLEIFRKKGYEVLFLTDPVDEWV CCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCHHHHHHCCCEEEEEECCHHHHH VQGLPEYGGKKLKAVDRGDVIPATEEEKKEQEAKREEAAKQYGDLLSFVKEKLAERVKEV HCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSNRLTDSACCLVADEHGLNANMERILRAMNQTVPESKRILELNPDHPIMQVMATLFGK HHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCC DKTNPRLADYCDLLYDQALLTEGSPIADPLRFTRLVAELMVADGKAAAGE CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SKTVKKFETEVQQLLDLVIHSLYSNKDIFLRELISNASDAIDKVLFESHQNAAVIEGEP CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC EGKIKLIPDKDAGTLTIRDNGVGMTLEEVEKNIGTIAHSGTKAFLANLKEQNVADHPELI CCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH GQFGVGFYASFMVADRVTLVTRRAGHDKAAGVRWESTGDGTYTVEECAKETRGTEITLHL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEHHHHHHHHCCCEEEEEH KEEMKEYLDEWKIRSIVRKYSDYVQYPIVMDVTRTEVPKGVNGEEIEGAGTIEKTEEETL HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHH NSMKAIWTRSKSEVTEEEYEEFYKHVSHDFEKPLKTIHYSAEGTSEFKALLYLPAHKPFD HHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCCC LFMPERKKGVQLYVRRVFITDSCEQLLPDYLRFVKGVVDSSDLPLNVSREILQEDVQIKR CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH IQKSLVSKILSTLSEMREKEADSYLDFYKEFGPVLKEGVHFDYANRDKLQDLLLFESTAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC DAGSFVSLKEYVERMPEGQEEIYFITGTSRAALEQSPHLEIFRKKGYEVLFLTDPVDEWV CCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCHHHHHHCCCEEEEEECCHHHHH VQGLPEYGGKKLKAVDRGDVIPATEEEKKEQEAKREEAAKQYGDLLSFVKEKLAERVKEV HCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSNRLTDSACCLVADEHGLNANMERILRAMNQTVPESKRILELNPDHPIMQVMATLFGK HHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCC DKTNPRLADYCDLLYDQALLTEGSPIADPLRFTRLVAELMVADGKAAAGE CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA