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The map label for this gene is ybeQ [H]

Identifier: 39997490

GI number: 39997490

Start: 2628645

End: 2629286

Strand: Direct

Name: ybeQ [H]

Synonym: GSU2395

Alternate gene names: 39997490

Gene position: 2628645-2629286 (Clockwise)

Preceding gene: 39997485

Following gene: 39997491

Centisome position: 68.92

GC content: 36.6

Gene sequence:

>642_bases
ATGAAGCGCACTATCACTTTAATATTATTTTGTATTTTAGCTCAGAATGTAACGATGAACTATTGTTTCGCCGATGTTCT
TTCCGAAGCATATACATATTTCAAAAACAAAAATTACGATAATGCCTTACCATTACTAGAAAATCTTGTAACAGAAGGAA
ATCTCGACGCTTATAATTTGCTAGGAACAATGTACAAAAAAGGATATTCAGTACCACAAAATCCTAATAAAGCAATTGAG
TTATATGAGTTTGCCGCAAAGAAAGGGCATGCAGGAGCACAATATAACCTAGGACTAATGTATGAATCTGGCTCCGGTAT
ATTGCAGGATTATTCTCAAGCCATAAAATGGTATAAACTCGCAGCTATTCAAAACGATTCTGGTGCGTTAAACAATTTAG
GCCATATTTATCACAATGGATTAGGTGTTAAGAAAAATATGAAAGAGGCATGCAATTATTACGGTAAAGCAGCCGCAATG
GGTGACGCGTTGGGCAAATGTAATATGGCTGGATGCTATGCTCAAGGCGAAGGTGTAAAGAAAGATTATAAGAAAGCAAA
AGTTCTTGCAAAAGAGGGCTATGAACAAGGTGAAGCGGCTTGTAGTGAGGTCTGGGATATTTTTGAACTAGCAAAACACT
AG

Upstream 100 bases:

>100_bases
TCTGAAGCTTCTGCAAAGTGACTGCTTTAACGTTGATACGTCAATCAAACCCATAGAAACAACTGATATTAAATAACAAT
AACCAAAGGAGTATTTCTAC

Downstream 100 bases:

>100_bases
CATTCCAACAAGACACATGGACGCCGACCGCCCGGCAACAAATTCTGGGGACACCATACTTAATTACCTATTGACAAGCG
CATTAACCATCACCAACGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKRTITLILFCILAQNVTMNYCFADVLSEAYTYFKNKNYDNALPLLENLVTEGNLDAYNLLGTMYKKGYSVPQNPNKAIE
LYEFAAKKGHAGAQYNLGLMYESGSGILQDYSQAIKWYKLAAIQNDSGALNNLGHIYHNGLGVKKNMKEACNYYGKAAAM
GDALGKCNMAGCYAQGEGVKKDYKKAKVLAKEGYEQGEAACSEVWDIFELAKH

Sequences:

>Translated_213_residues
MKRTITLILFCILAQNVTMNYCFADVLSEAYTYFKNKNYDNALPLLENLVTEGNLDAYNLLGTMYKKGYSVPQNPNKAIE
LYEFAAKKGHAGAQYNLGLMYESGSGILQDYSQAIKWYKLAAIQNDSGALNNLGHIYHNGLGVKKNMKEACNYYGKAAAM
GDALGKCNMAGCYAQGEGVKKDYKKAKVLAKEGYEQGEAACSEVWDIFELAKH
>Mature_213_residues
MKRTITLILFCILAQNVTMNYCFADVLSEAYTYFKNKNYDNALPLLENLVTEGNLDAYNLLGTMYKKGYSVPQNPNKAIE
LYEFAAKKGHAGAQYNLGLMYESGSGILQDYSQAIKWYKLAAIQNDSGALNNLGHIYHNGLGVKKNMKEACNYYGKAAAM
GDALGKCNMAGCYAQGEGVKKDYKKAKVLAKEGYEQGEAACSEVWDIFELAKH

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=163, Percent_Identity=33.1288343558282, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI151301150, Length=157, Percent_Identity=33.1210191082803, Blast_Score=74, Evalue=9e-14,
Organism=Escherichia coli, GI87081769, Length=162, Percent_Identity=39.5061728395062, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786867, Length=121, Percent_Identity=37.1900826446281, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17563256, Length=168, Percent_Identity=29.7619047619048, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 23601; Mature: 23601

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTITLILFCILAQNVTMNYCFADVLSEAYTYFKNKNYDNALPLLENLVTEGNLDAYNL
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHH
LGTMYKKGYSVPQNPNKAIELYEFAAKKGHAGAQYNLGLMYESGSGILQDYSQAIKWYKL
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHH
AAIQNDSGALNNLGHIYHNGLGVKKNMKEACNYYGKAAAMGDALGKCNMAGCYAQGEGVK
HHEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
KDYKKAKVLAKEGYEQGEAACSEVWDIFELAKH
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRTITLILFCILAQNVTMNYCFADVLSEAYTYFKNKNYDNALPLLENLVTEGNLDAYNL
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHH
LGTMYKKGYSVPQNPNKAIELYEFAAKKGHAGAQYNLGLMYESGSGILQDYSQAIKWYKL
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHH
AAIQNDSGALNNLGHIYHNGLGVKKNMKEACNYYGKAAAMGDALGKCNMAGCYAQGEGVK
HHEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
KDYKKAKVLAKEGYEQGEAACSEVWDIFELAKH
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]