Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39997429
Identifier: 39997429
GI number: 39997429
Start: 2550270
End: 2551007
Strand: Direct
Name: 39997429
Synonym: GSU2332
Alternate gene names: NA
Gene position: 2550270-2551007 (Clockwise)
Preceding gene: 39997428
Following gene: 39997431
Centisome position: 66.86
GC content: 59.89
Gene sequence:
>738_bases ATGCCGGAAAACCTGATTATTCCATCCGTAGACTTGAGAATCGGCGCCCTGGAGGAGTACAACCGGCGCCAGAAGGAAAA GGCCCACCATAGGCAGAAGGGCCCGAAACCGCGCCCCTGCATAACGTTGTCGAGGGAATTCGGCTGCGAAGGGTACCCCG TTGCGGAGAGCCTCCTGAAGCTCATGCCGGAGCAGACCGGCGACCAGTGGGTGCTGGTAGACAAGGATGTGCTGGATGAG GTGGCACGGCGCCACCATGTTTCGAGGGAAATTCTGGAGGCCCTGGGGACCAAGAACCGTATCCTCTCCCAGGTTCTGGC CACCTTCTCCGAGCGCTGGAAGACCGACCACGAATACTTCGAGCTCCTCTGCAGCCACATCGTCTCCCTGGCGGAGCAGG GCAACGTCATCATCGTCGGCCTGGGGGGAGCCATCATCACCCACCACCGGGAACACTGCTATGACTTCCGGATCTTCGGC TCCCGAGAGTTCAAGATCGGCTCAATCTGCCAAAGGATGAACCTCCCCCCCGACAAGGCGGCGGATCTGATCGAAAAGCA GCAGGCCCAGATCGACAATTTCACCCGGGAGTTTCTCTTCGAGGATGAAGCAAACCCCGCCATCTACGACCTTCTGTTCA ACAACGACCGGATGTGCCCGGAAACCATGGCCCGGACCATTGCCGACTACGTCGCGGGCCGCATTGCCGCCGGAACGGCG GATAAACGACACGTCTGA
Upstream 100 bases:
>100_bases TTCAGAGCCACGGCTTTGACCTGTAAGCCATAAGCCTTGAGGTCATTACCCCGATGAACTATAGTCAGCAAACCAACATA GGCAATTCAGAGGAGCACCC
Downstream 100 bases:
>100_bases ACAGGCTTACTCAATTGTAAACAGGTGACGGCCGCCGCGCCACATCGCTCCGCGTTCCGCTTCGTCGGCGTGGTGGCCGT CACCTGTTCAGGTCATTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPENLIIPSVDLRIGALEEYNRRQKEKAHHRQKGPKPRPCITLSREFGCEGYPVAESLLKLMPEQTGDQWVLVDKDVLDE VARRHHVSREILEALGTKNRILSQVLATFSERWKTDHEYFELLCSHIVSLAEQGNVIIVGLGGAIITHHREHCYDFRIFG SREFKIGSICQRMNLPPDKAADLIEKQQAQIDNFTREFLFEDEANPAIYDLLFNNDRMCPETMARTIADYVAGRIAAGTA DKRHV
Sequences:
>Translated_245_residues MPENLIIPSVDLRIGALEEYNRRQKEKAHHRQKGPKPRPCITLSREFGCEGYPVAESLLKLMPEQTGDQWVLVDKDVLDE VARRHHVSREILEALGTKNRILSQVLATFSERWKTDHEYFELLCSHIVSLAEQGNVIIVGLGGAIITHHREHCYDFRIFG SREFKIGSICQRMNLPPDKAADLIEKQQAQIDNFTREFLFEDEANPAIYDLLFNNDRMCPETMARTIADYVAGRIAAGTA DKRHV >Mature_244_residues PENLIIPSVDLRIGALEEYNRRQKEKAHHRQKGPKPRPCITLSREFGCEGYPVAESLLKLMPEQTGDQWVLVDKDVLDEV ARRHHVSREILEALGTKNRILSQVLATFSERWKTDHEYFELLCSHIVSLAEQGNVIIVGLGGAIITHHREHCYDFRIFGS REFKIGSICQRMNLPPDKAADLIEKQQAQIDNFTREFLFEDEANPAIYDLLFNNDRMCPETMARTIADYVAGRIAAGTAD KRHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28052; Mature: 27921
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENLIIPSVDLRIGALEEYNRRQKEKAHHRQKGPKPRPCITLSREFGCEGYPVAESLLK CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHCCCCCCCHHHHHHH LMPEQTGDQWVLVDKDVLDEVARRHHVSREILEALGTKNRILSQVLATFSERWKTDHEYF HCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH ELLCSHIVSLAEQGNVIIVGLGGAIITHHREHCYDFRIFGSREFKIGSICQRMNLPPDKA HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCCCCHHH ADLIEKQQAQIDNFTREFLFEDEANPAIYDLLFNNDRMCPETMARTIADYVAGRIAAGTA HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC DKRHV CCCCC >Mature Secondary Structure PENLIIPSVDLRIGALEEYNRRQKEKAHHRQKGPKPRPCITLSREFGCEGYPVAESLLK CCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHCCCCCCCHHHHHHH LMPEQTGDQWVLVDKDVLDEVARRHHVSREILEALGTKNRILSQVLATFSERWKTDHEYF HCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH ELLCSHIVSLAEQGNVIIVGLGGAIITHHREHCYDFRIFGSREFKIGSICQRMNLPPDKA HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCCCCHHH ADLIEKQQAQIDNFTREFLFEDEANPAIYDLLFNNDRMCPETMARTIADYVAGRIAAGTA HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC DKRHV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA