Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997277
Identifier: 39997277
GI number: 39997277
Start: 2389275
End: 2389793
Strand: Direct
Name: 39997277
Synonym: GSU2179
Alternate gene names: NA
Gene position: 2389275-2389793 (Clockwise)
Preceding gene: 39997276
Following gene: 39997279
Centisome position: 62.64
GC content: 54.14
Gene sequence:
>519_bases ATGAATGTGCTGGTGTGTGATCTCGGATTTTCTTCGGCCAAGTGGATTTACGGGGAGCGCAAGGGAAGGATCATTTCTGC GTTCAGCTACAACGGCGATAATCTGCTCATCGGAGAAGATTCCCTGATGGCGTCGGGTTCTTCCTATCTGAAAACGATGG AAGAGCTTGTGCGCTACTATCCGGTATTTGTGGAACAGTGCCTGAAGCAGGCTGGCTGTGAGGGGGACATTCTTCTTGCC GTCGGGCTGCCATACTCCTATTGGCAGGAACAACACAAGCCGGGCGGCGCCGTGCCGGCATTGGCCAAGTCACTGACCGA CGGAGCAATCAAGGATGTGGCTGTGTTCCCGCAGGGACTGGGAGGTTTGAGGGATTATCTCGATGGACTTCCGGAGCGCC CGACCGGCAATGTTCTCGGTATCGATATCGGCTTCAACACCATCATCTTCACCCACTGCTGTCCCATAGTTTCTAAAGCA GCACCAGTTGTGGCGAAGCCTCTACTTTCGGTGGTTTGA
Upstream 100 bases:
>100_bases TGTCACCAAATATATCCCCATATTTGCCACCGGTACCTGCCCCCCCTATAGATATTTTGTATGGAGGCGTACCCGCCTTA CAAAATTTCTGGGGGTTGAT
Downstream 100 bases:
>100_bases ATAGGCTTTCAAGGTCTCGCCGCTCGAACAAATTCAGCTGTAATAACCGTAATATCTGCTGCATCGACGATCCGATCTTT GACAGAAACGTCAAGTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNVLVCDLGFSSAKWIYGERKGRIISAFSYNGDNLLIGEDSLMASGSSYLKTMEELVRYYPVFVEQCLKQAGCEGDILLA VGLPYSYWQEQHKPGGAVPALAKSLTDGAIKDVAVFPQGLGGLRDYLDGLPERPTGNVLGIDIGFNTIIFTHCCPIVSKA APVVAKPLLSVV
Sequences:
>Translated_172_residues MNVLVCDLGFSSAKWIYGERKGRIISAFSYNGDNLLIGEDSLMASGSSYLKTMEELVRYYPVFVEQCLKQAGCEGDILLA VGLPYSYWQEQHKPGGAVPALAKSLTDGAIKDVAVFPQGLGGLRDYLDGLPERPTGNVLGIDIGFNTIIFTHCCPIVSKA APVVAKPLLSVV >Mature_172_residues MNVLVCDLGFSSAKWIYGERKGRIISAFSYNGDNLLIGEDSLMASGSSYLKTMEELVRYYPVFVEQCLKQAGCEGDILLA VGLPYSYWQEQHKPGGAVPALAKSLTDGAIKDVAVFPQGLGGLRDYLDGLPERPTGNVLGIDIGFNTIIFTHCCPIVSKA APVVAKPLLSVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18502; Mature: 18502
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLVCDLGFSSAKWIYGERKGRIISAFSYNGDNLLIGEDSLMASGSSYLKTMEELVRYY CCEEEEECCCCCCCEEEECCCCCEEEEEEECCCEEEEECCHHHHCCHHHHHHHHHHHHHH PVFVEQCLKQAGCEGDILLAVGLPYSYWQEQHKPGGAVPALAKSLTDGAIKDVAVFPQGL HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCC GGLRDYLDGLPERPTGNVLGIDIGFNTIIFTHCCPIVSKAAPVVAKPLLSVV CHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MNVLVCDLGFSSAKWIYGERKGRIISAFSYNGDNLLIGEDSLMASGSSYLKTMEELVRYY CCEEEEECCCCCCCEEEECCCCCEEEEEEECCCEEEEECCHHHHCCHHHHHHHHHHHHHH PVFVEQCLKQAGCEGDILLAVGLPYSYWQEQHKPGGAVPALAKSLTDGAIKDVAVFPQGL HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCC GGLRDYLDGLPERPTGNVLGIDIGFNTIIFTHCCPIVSKAAPVVAKPLLSVV CHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA