Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39997276

Identifier: 39997276

GI number: 39997276

Start: 2388465

End: 2389097

Strand: Direct

Name: 39997276

Synonym: GSU2178

Alternate gene names: NA

Gene position: 2388465-2389097 (Clockwise)

Preceding gene: 39997275

Following gene: 39997277

Centisome position: 62.62

GC content: 51.5

Gene sequence:

>633_bases
ATGAAAGTTGAAGATATCGAAGAACTGCTCAACACCCGGATCATCGAAGCGTTTTTGAGAGGATTCAGTGTCGTTGAGAT
CACCAGGGCGCTGAGGAAAACTACCGCAACTTCGGTCTATAATCTGCTGCGCGATACTGGCCGTATCAAATCTATGGCTA
GAAGCGAGTACCGCCGCCAGTACGATATCGACCCGAGGTTGGCGACCGCATGCCGGCAAAAGGGATTCTCCTTTGGACGA
TGGTGTCTCAGTTGGCGGCTTGATCCGCATATGGCCGTAGCTGAGCTGAAATCTGCCCCTGACACTGAGGAAGAGAGTGC
TGCTCATGTGGCGCTGAAGAGAGATTTCCCGGATATCTATCTCAGGCTGTACAATGGGGCAAAGATCAAATCGGAGAAAA
AGGGTAAATACCGGTCCAAGCCTGCTTCTCTAATGATCGAATGGAGTTCGGAGCGGAAAGCGTTTTTAGCGACTGTCCCG
GAATGTCCAGGCATCGAGGCCAGTGGCAAGAACTGGGATGATGTTTTCTCCGCCATAAAGTCGGTGCATCTGATGCACGA
ACATGTGAAACGGATTGACTGGCTTCTCAGCAGATCTGCCGATGAGTTTTGTCCGGCCAGTGGAGCCGAATAG

Upstream 100 bases:

>100_bases
TGGAAAATCAGCGCAGGAAATCTGTCAAATATTCCAACTAACAAACTTTTCTAAGGAAAAGTCTTAATAGAAAAGTTTGT
ATTACGACAAGGAGCCAGCA

Downstream 100 bases:

>100_bases
TCACATCTCCGTATTTGCGCCAAATTTGGTACCAAGTTTGTTACCAAATATGCGCCAAGTTCCGGAGGTGGCAAATTTGT
CACCAAATATATCCCCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKVEDIEELLNTRIIEAFLRGFSVVEITRALRKTTATSVYNLLRDTGRIKSMARSEYRRQYDIDPRLATACRQKGFSFGR
WCLSWRLDPHMAVAELKSAPDTEEESAAHVALKRDFPDIYLRLYNGAKIKSEKKGKYRSKPASLMIEWSSERKAFLATVP
ECPGIEASGKNWDDVFSAIKSVHLMHEHVKRIDWLLSRSADEFCPASGAE

Sequences:

>Translated_210_residues
MKVEDIEELLNTRIIEAFLRGFSVVEITRALRKTTATSVYNLLRDTGRIKSMARSEYRRQYDIDPRLATACRQKGFSFGR
WCLSWRLDPHMAVAELKSAPDTEEESAAHVALKRDFPDIYLRLYNGAKIKSEKKGKYRSKPASLMIEWSSERKAFLATVP
ECPGIEASGKNWDDVFSAIKSVHLMHEHVKRIDWLLSRSADEFCPASGAE
>Mature_210_residues
MKVEDIEELLNTRIIEAFLRGFSVVEITRALRKTTATSVYNLLRDTGRIKSMARSEYRRQYDIDPRLATACRQKGFSFGR
WCLSWRLDPHMAVAELKSAPDTEEESAAHVALKRDFPDIYLRLYNGAKIKSEKKGKYRSKPASLMIEWSSERKAFLATVP
ECPGIEASGKNWDDVFSAIKSVHLMHEHVKRIDWLLSRSADEFCPASGAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24030; Mature: 24030

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVEDIEELLNTRIIEAFLRGFSVVEITRALRKTTATSVYNLLRDTGRIKSMARSEYRRQ
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDIDPRLATACRQKGFSFGRWCLSWRLDPHMAVAELKSAPDTEEESAAHVALKRDFPDIY
CCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHH
LRLYNGAKIKSEKKGKYRSKPASLMIEWSSERKAFLATVPECPGIEASGKNWDDVFSAIK
HHHHCCCCCCCHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
SVHLMHEHVKRIDWLLSRSADEFCPASGAE
HHHHHHHHHHHHHHHHHCCCHHCCCCCCCC
>Mature Secondary Structure
MKVEDIEELLNTRIIEAFLRGFSVVEITRALRKTTATSVYNLLRDTGRIKSMARSEYRRQ
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDIDPRLATACRQKGFSFGRWCLSWRLDPHMAVAELKSAPDTEEESAAHVALKRDFPDIY
CCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHH
LRLYNGAKIKSEKKGKYRSKPASLMIEWSSERKAFLATVPECPGIEASGKNWDDVFSAIK
HHHHCCCCCCCHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
SVHLMHEHVKRIDWLLSRSADEFCPASGAE
HHHHHHHHHHHHHHHHHCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA