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The map label for this gene is insD1 [C]

Identifier: 39997269

GI number: 39997269

Start: 2383423

End: 2384313

Strand: Direct

Name: insD1 [C]

Synonym: GSU2171

Alternate gene names: 39997269

Gene position: 2383423-2384313 (Clockwise)

Preceding gene: 39997268

Following gene: 39997271

Centisome position: 62.49

GC content: 56.79

Gene sequence:

>891_bases
ATGAGTGCTACGATCTCCCCTGCCACCGGTAAAGCCTATGGCGTTCAGCGCGTCTGCCTTGCCTGGGGAGTGCCCCGCTC
GTCGTTCTATAGCCGTGCAGGCAGAAAAACATTGCCTGCTGTACTGCTCAAGCGTGGTCCAAAAACACCGCTCTCTGACG
ACGAGGTACTTTCTCTCATCCGGACCGACCTGGAGACATCCCCCTTTGTCGGCGAAGGGCACCGTAAGGTCTGGGGACGA
CTACGCTTCGTCAAAGGGATAAAAGTCGGCCGCAAACGAGTGTTGCGTCTCATGCGGGAGAACAATCTGCTCTCCCCTCA
CCGGGTTGTTCAGGGACAGCCCAAGGACCACGCCGGCAAGATCATCACGGCGGCCCCCAACGTCATGTGGGGTACCGATG
GCACCAAGATCTTCACCCTGGAAGAAGGGTGGTGCTGGTTGTTTACCGCCGTCGAGCATTGGAATGCCGAGTGCGTCGGT
TGGCATGTGACCAAGAATGGCGACCGGTTTGCCGCATTGCAGCCGCTCGCCATGGGAATCAAGGCCCGTTTCGGCTCGGT
CGGTGCCGCTGCTGCTCGAGGGTTGGCACTGAGGATGGATCACGGCAGCCAATACCTCTCAGAGCATTTCCAGAATCAGA
TCAAGTTCTGGGGAATTGCCCCAAGTTTCTCATTTGTTGCCGAACCGCAGACCAACGGGGTGACGGAACGGTTTAATCGG
ACTATCAAAGAGCAGGTCATCTATGGCCGCCATTACCGCACAATCGAAGAAGTAAGGATGGCAGTAGCTGACTTCATGGA
TCGTTACAACCGGCTGTGGCTGGTTGAAAAGCTCGGGTTCAGAAGCCCACGACAGGCTTTCGAGGAGTATCAACTCAAGA
AGGCTGCGTGA

Upstream 100 bases:

>100_bases
ATGCAGCCTTCAAGCGCATCGGTGAGATCACCATGGAAAACGAGCTACTGCGGGAGAAAGCGAGGCGTGCCCACCCTTTG
GCCCAGAGGAGATCGAAGAA

Downstream 100 bases:

>100_bases
CTCTTATCTTGTGTCCAGGGTACCGGGCGCGCTACATCTCTTTCTCCGTCTTCACGTCGTCGTTCGCCATGGAGAACCCT
GCGACCGCGACAAGAAGCAG

Product: ISGsu7, transposase OrfB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSATISPATGKAYGVQRVCLAWGVPRSSFYSRAGRKTLPAVLLKRGPKTPLSDDEVLSLIRTDLETSPFVGEGHRKVWGR
LRFVKGIKVGRKRVLRLMRENNLLSPHRVVQGQPKDHAGKIITAAPNVMWGTDGTKIFTLEEGWCWLFTAVEHWNAECVG
WHVTKNGDRFAALQPLAMGIKARFGSVGAAAARGLALRMDHGSQYLSEHFQNQIKFWGIAPSFSFVAEPQTNGVTERFNR
TIKEQVIYGRHYRTIEEVRMAVADFMDRYNRLWLVEKLGFRSPRQAFEEYQLKKAA

Sequences:

>Translated_296_residues
MSATISPATGKAYGVQRVCLAWGVPRSSFYSRAGRKTLPAVLLKRGPKTPLSDDEVLSLIRTDLETSPFVGEGHRKVWGR
LRFVKGIKVGRKRVLRLMRENNLLSPHRVVQGQPKDHAGKIITAAPNVMWGTDGTKIFTLEEGWCWLFTAVEHWNAECVG
WHVTKNGDRFAALQPLAMGIKARFGSVGAAAARGLALRMDHGSQYLSEHFQNQIKFWGIAPSFSFVAEPQTNGVTERFNR
TIKEQVIYGRHYRTIEEVRMAVADFMDRYNRLWLVEKLGFRSPRQAFEEYQLKKAA
>Mature_295_residues
SATISPATGKAYGVQRVCLAWGVPRSSFYSRAGRKTLPAVLLKRGPKTPLSDDEVLSLIRTDLETSPFVGEGHRKVWGRL
RFVKGIKVGRKRVLRLMRENNLLSPHRVVQGQPKDHAGKIITAAPNVMWGTDGTKIFTLEEGWCWLFTAVEHWNAECVGW
HVTKNGDRFAALQPLAMGIKARFGSVGAAAARGLALRMDHGSQYLSEHFQNQIKFWGIAPSFSFVAEPQTNGVTERFNRT
IKEQVIYGRHYRTIEEVRMAVADFMDRYNRLWLVEKLGFRSPRQAFEEYQLKKAA

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=280, Percent_Identity=26.4285714285714, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789424, Length=280, Percent_Identity=26.4285714285714, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789224, Length=280, Percent_Identity=26.4285714285714, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788305, Length=280, Percent_Identity=26.4285714285714, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787669, Length=280, Percent_Identity=26.4285714285714, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786558, Length=280, Percent_Identity=26.4285714285714, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788405, Length=170, Percent_Identity=28.2352941176471, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787263, Length=170, Percent_Identity=28.2352941176471, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786753, Length=170, Percent_Identity=28.2352941176471, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786570, Length=170, Percent_Identity=28.2352941176471, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786490, Length=170, Percent_Identity=28.2352941176471, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 33503; Mature: 33372

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATISPATGKAYGVQRVCLAWGVPRSSFYSRAGRKTLPAVLLKRGPKTPLSDDEVLSLI
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHH
RTDLETSPFVGEGHRKVWGRLRFVKGIKVGRKRVLRLMRENNLLSPHRVVQGQPKDHAGK
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHCCC
IITAAPNVMWGTDGTKIFTLEEGWCWLFTAVEHWNAECVGWHVTKNGDRFAALQPLAMGI
EEEECCCEEECCCCCEEEEEECCCEEEEEHHHHCCCEEEEEEEECCCCCEEHHHHHHHHH
KARFGSVGAAAARGLALRMDHGSQYLSEHFQNQIKFWGIAPSFSFVAEPQTNGVTERFNR
HHHCCCCHHHHHCCEEEEECCCHHHHHHHHHCCEEEEEECCCCCEEECCCCCCHHHHHHH
TIKEQVIYGRHYRTIEEVRMAVADFMDRYNRLWLVEKLGFRSPRQAFEEYQLKKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SATISPATGKAYGVQRVCLAWGVPRSSFYSRAGRKTLPAVLLKRGPKTPLSDDEVLSLI
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHH
RTDLETSPFVGEGHRKVWGRLRFVKGIKVGRKRVLRLMRENNLLSPHRVVQGQPKDHAGK
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHCCC
IITAAPNVMWGTDGTKIFTLEEGWCWLFTAVEHWNAECVGWHVTKNGDRFAALQPLAMGI
EEEECCCEEECCCCCEEEEEECCCEEEEEHHHHCCCEEEEEEEECCCCCEEHHHHHHHHH
KARFGSVGAAAARGLALRMDHGSQYLSEHFQNQIKFWGIAPSFSFVAEPQTNGVTERFNR
HHHCCCCHHHHHCCEEEEECCCHHHHHHHHHCCEEEEEECCCCCEEECCCCCCHHHHHHH
TIKEQVIYGRHYRTIEEVRMAVADFMDRYNRLWLVEKLGFRSPRQAFEEYQLKKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA