Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997271
Identifier: 39997271
GI number: 39997271
Start: 2385179
End: 2385307
Strand: Direct
Name: 39997271
Synonym: GSU2173
Alternate gene names: NA
Gene position: 2385179-2385307 (Clockwise)
Preceding gene: 39997269
Following gene: 39997272
Centisome position: 62.54
GC content: 53.49
Gene sequence:
>129_bases ATGAGGACTGTTGGTGGGGTATGTGGCGGAACAACCGGAGCAACAGGGTGCGGAATGAACATCTACATCTTCGGTGATGG TCAGGTTGAAGGGTTGGCTGAGATGAAAAACTGCTGGGCGGCAAGGTAG
Upstream 100 bases:
>100_bases AGTGTGCTTCATTCACATAATCTATAGGGGGGGCAGGTTCAGGCGTCGTCACTGATCCGAGCAGCGCCATATCTGGTTCA TCTGCTCAATTACGACTCTG
Downstream 100 bases:
>100_bases TCAATCTGGCGGAAATGATCAGTACCGGCCTGCCGGTCCCCCCGGTGTGGACACCCTCAATGTGTCCTGACCTTTCCAGT ACATAATTTTTTTCAGCCGA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MRTVGGVCGGTTGATGCGMNIYIFGDGQVEGLAEMKNCWAAR
Sequences:
>Translated_42_residues MRTVGGVCGGTTGATGCGMNIYIFGDGQVEGLAEMKNCWAAR >Mature_42_residues MRTVGGVCGGTTGATGCGMNIYIFGDGQVEGLAEMKNCWAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4284; Mature: 4284
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 14.3 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 14.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVGGVCGGTTGATGCGMNIYIFGDGQVEGLAEMKNCWAAR CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCC >Mature Secondary Structure MRTVGGVCGGTTGATGCGMNIYIFGDGQVEGLAEMKNCWAAR CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA