Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997264
Identifier: 39997264
GI number: 39997264
Start: 2381011
End: 2381532
Strand: Direct
Name: 39997264
Synonym: GSU2166
Alternate gene names: NA
Gene position: 2381011-2381532 (Clockwise)
Preceding gene: 39997263
Following gene: 39997265
Centisome position: 62.43
GC content: 59.96
Gene sequence:
>522_bases ATGAGCCCTCTCGACCGACAGACTGACGAACCGACCAACGAGGAACGTGCCGGCAGGATTGACACTGTCATGCAGGCCTA CTGCCTGACCCTCGAAAACCGGGATTTCGACGGCGACGAAGACGACGTGAAGGACATGCTCACCGACCTAATGCACTTCT GTGAGCGGATGGAGATCGATTTCGAAGAGAATCTCCGCGTCGCCCGCAACAACTACAAGCATGAACGGCTCGCGGAACAA GGCGATACCGGCCAGCTTGGCTGCCCGGTGTGCGGCTGCTTTCTGGAGGTTACCCGGACCGATACCCTGTTGGGGATCGA CCGGGAGTTGTACGACTGCCAGGAATGCGACGAGATCTTCATCCGGGAGCTGAATGCCCCGGACAGTCCACTCCAGCGAG CAGTCAAATGTGTCGGCTGCGGCAACATGATTCCGCAGGCCTCGGCGCGCATCCTGTACCAGCGGGACGACTACGCCCAC TTTATCGGCGAGTGCTGCTGGGACGAACGGCTGCGTGAGTGA
Upstream 100 bases:
>100_bases CCGATGTCCGGTGGGAAACCGACACGGTGCTGATCAAGTCGCTCGACGAACCGGACATCCTGGATGAGCGGTAAGCGTGC GGAGAAGAGGAGGACGCAGC
Downstream 100 bases:
>100_bases AAGGAGGCTTGCCATGACCCTGAACACGACGTTGCAGGCGGCACGAGATATGGGCGTGCCGGAGCGTTACGCGGTAATGC GCCGGCTGGCCTTCCTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSPLDRQTDEPTNEERAGRIDTVMQAYCLTLENRDFDGDEDDVKDMLTDLMHFCERMEIDFEENLRVARNNYKHERLAEQ GDTGQLGCPVCGCFLEVTRTDTLLGIDRELYDCQECDEIFIRELNAPDSPLQRAVKCVGCGNMIPQASARILYQRDDYAH FIGECCWDERLRE
Sequences:
>Translated_173_residues MSPLDRQTDEPTNEERAGRIDTVMQAYCLTLENRDFDGDEDDVKDMLTDLMHFCERMEIDFEENLRVARNNYKHERLAEQ GDTGQLGCPVCGCFLEVTRTDTLLGIDRELYDCQECDEIFIRELNAPDSPLQRAVKCVGCGNMIPQASARILYQRDDYAH FIGECCWDERLRE >Mature_172_residues SPLDRQTDEPTNEERAGRIDTVMQAYCLTLENRDFDGDEDDVKDMLTDLMHFCERMEIDFEENLRVARNNYKHERLAEQG DTGQLGCPVCGCFLEVTRTDTLLGIDRELYDCQECDEIFIRELNAPDSPLQRAVKCVGCGNMIPQASARILYQRDDYAHF IGECCWDERLRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20073; Mature: 19941
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLDRQTDEPTNEERAGRIDTVMQAYCLTLENRDFDGDEDDVKDMLTDLMHFCERMEID CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC FEENLRVARNNYKHERLAEQGDTGQLGCPVCGCFLEVTRTDTLLGIDRELYDCQECDEIF HHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IRELNAPDSPLQRAVKCVGCGNMIPQASARILYQRDDYAHFIGECCWDERLRE HHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPLDRQTDEPTNEERAGRIDTVMQAYCLTLENRDFDGDEDDVKDMLTDLMHFCERMEID CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC FEENLRVARNNYKHERLAEQGDTGQLGCPVCGCFLEVTRTDTLLGIDRELYDCQECDEIF HHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IRELNAPDSPLQRAVKCVGCGNMIPQASARILYQRDDYAHFIGECCWDERLRE HHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA