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The map label for this gene is 39997265

Identifier: 39997265

GI number: 39997265

Start: 2381546

End: 2382061

Strand: Direct

Name: 39997265

Synonym: GSU2167

Alternate gene names: NA

Gene position: 2381546-2382061 (Clockwise)

Preceding gene: 39997264

Following gene: 39997266

Centisome position: 62.44

GC content: 61.05

Gene sequence:

>516_bases
ATGACCCTGAACACGACGTTGCAGGCGGCACGAGATATGGGCGTGCCGGAGCGTTACGCGGTAATGCGCCGGCTGGCCTT
CCTGCAGCCGCAGATCAAGCATCTGGAGCGGGAAATCTGGGGAGCGCGACGGCGGACGGATCGCAGTCGCGACCTGCTGA
TCAAGGCCCTGTCCGAATCCCTCATCAGAGACCAGGAAAAGGAGCTTCGCCCCATGAAACGTGAGGCGACGGCGCTCCTG
AACCATGTCAACGGCAAGGAGACTGTGCAGGCGCCCGGCGGAATCACCCAGGAGATGATCGACCAGGCCCGGCAGTATCC
CATCACCAGCATCATCGAATTCTCCAAGGGGCGGTACCGCTGCTGTCCGTTTCACGAGGACCGCAATCCGTCCATGGCCT
TGTACGAAAACCACGTCCACTGTTTCGTCTGTAACCGGACCTGGGATTCGATCAGTGCCACGATGGCGCTGGATGGCGTG
ACTTTCCGGGAAGCCGTACTGGCTCTCCAGAGCTGA

Upstream 100 bases:

>100_bases
CAGGCCTCGGCGCGCATCCTGTACCAGCGGGACGACTACGCCCACTTTATCGGCGAGTGCTGCTGGGACGAACGGCTGCG
TGAGTGAAAGGAGGCTTGCC

Downstream 100 bases:

>100_bases
ACAAAATCTATCTCAAACCCTATGGGGGCGATGACTGCCCCCCCAAGGGGAGGTCCGCCCCCGCTATCGGAGGAGGATAT
GAATCTTAATCTCTTCGGTG

Product: CHC2 zinc finger domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTLNTTLQAARDMGVPERYAVMRRLAFLQPQIKHLEREIWGARRRTDRSRDLLIKALSESLIRDQEKELRPMKREATALL
NHVNGKETVQAPGGITQEMIDQARQYPITSIIEFSKGRYRCCPFHEDRNPSMALYENHVHCFVCNRTWDSISATMALDGV
TFREAVLALQS

Sequences:

>Translated_171_residues
MTLNTTLQAARDMGVPERYAVMRRLAFLQPQIKHLEREIWGARRRTDRSRDLLIKALSESLIRDQEKELRPMKREATALL
NHVNGKETVQAPGGITQEMIDQARQYPITSIIEFSKGRYRCCPFHEDRNPSMALYENHVHCFVCNRTWDSISATMALDGV
TFREAVLALQS
>Mature_170_residues
TLNTTLQAARDMGVPERYAVMRRLAFLQPQIKHLEREIWGARRRTDRSRDLLIKALSESLIRDQEKELRPMKREATALLN
HVNGKETVQAPGGITQEMIDQARQYPITSIIEFSKGRYRCCPFHEDRNPSMALYENHVHCFVCNRTWDSISATMALDGVT
FREAVLALQS

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19746; Mature: 19615

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNTTLQAARDMGVPERYAVMRRLAFLQPQIKHLEREIWGARRRTDRSRDLLIKALSES
CCCCHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LIRDQEKELRPMKREATALLNHVNGKETVQAPGGITQEMIDQARQYPITSIIEFSKGRYR
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCHHHHHHHCCCCEE
CCPFHEDRNPSMALYENHVHCFVCNRTWDSISATMALDGVTFREAVLALQS
ECCCCCCCCCCEEEEECCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TLNTTLQAARDMGVPERYAVMRRLAFLQPQIKHLEREIWGARRRTDRSRDLLIKALSES
CCCHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LIRDQEKELRPMKREATALLNHVNGKETVQAPGGITQEMIDQARQYPITSIIEFSKGRYR
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCHHHHHHHCCCCEE
CCPFHEDRNPSMALYENHVHCFVCNRTWDSISATMALDGVTFREAVLALQS
ECCCCCCCCCCEEEEECCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA