Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is braE [H]
Identifier: 39997105
GI number: 39997105
Start: 2200668
End: 2201741
Strand: Direct
Name: braE [H]
Synonym: GSU2007
Alternate gene names: 39997105
Gene position: 2200668-2201741 (Clockwise)
Preceding gene: 39997104
Following gene: 39997106
Centisome position: 57.7
GC content: 58.85
Gene sequence:
>1074_bases ATGAGACAGATCAATGCTCTGATAACCAATACGCGGGGGGCCTCGCCGGTGTCGATCATCCTCGGGGTGGTCATCCTCGC GGGCCTATTCCTCTTTCCCAAAGCAGTGGAGAGCCCCTACGCCCTTCACATCATGATCCTCTTCTTCCTCAGCACCATCA TGGGGGAGAGCTGGAACATCGTCGGCGGCTACACGGGACAGTACTCAGTGGGCCATGCCGCCTATTTCGGGGCCGGCGCC TACACCACCATGGTTCTGATGCAGTTCAAGCAGATCCCCCCTTGGTACGGGATGATTGCCGGCATCGCAGTGGCGCTGGT GGTTTCCCTCATCATCGGCAGCATCTGCTTCCGACTCCGGGGACCCTATTTTGTTCTCGCGTCCATTGCCGTGGCCGAGA TTATGCGCCTCTGCGCCATGAATCTGAAGGACCTGACCAACGGTGCCGAAGGTATCCTGGCCACAGACATCCCCCCTTTC ACCCTGGGTGGGACGGTAATCACCGACTTTCTCTCCAAGGTCCCCTTCTACTACATCGGCCTGGTGATCGCCATCCTGAC CATCGCAGTCACCTATCTGGTGCAGCACTCCAAACTCGGCTACTACTTCCAGGCCATCCGCGAAGACCAGGATGCGGCCC ATTCTCTCGGGATCAACCTCTCTATCTACAAGAACATCGCCCTGGCCATCTCGGCGGTCTTCACGTCGCTGGCAGGCAGC TTCTACGCCATCTACATCGGCTTTATCGACCCCCCTACAGTGCTCGCCCTGGACATCTCGGTTCAGATCGTTCTTATCTG CATCATCGGCGGCATCGGCACCATCTGGGGACCGGTGGTGGGGTCACTGGTGCTGGTACCTCTCTCCGAAGCCCTGCGCA GCAACCTGATCGCCCAGGGAATATTCAAGATCGGCCTGGCCAGCGAGGAGTCCGGAGTCGGGATCTTCCTCAAGGACCAC CTGGCCCACGCCCACGCCCTGATCTACGGTATCCTGGTCGTAGTGGTCATCCTCTTCATGCCCGACGGCGTCCTGGGCTA CGTCAAGAAACTCACCAAGAAAAAGGCGATGTGA
Upstream 100 bases:
>100_bases CTGGAAGGACGTGGTCGTGTTCGTCCTCTTCCTCCTGGTGCTTCTCTTCAAGCCGGCGGGTCTGCTCGGCAAATCCAAAA TGTAGCGGGGTCCGACTGAC
Downstream 100 bases:
>100_bases GGTCAATCCCATGGCGATACTGGAAATAAAGCACGTCAGTAAATTCTTCGGCGGTCTCGCCGCTAACTCGGACGTCTCCT TCTCCATGGAGGAGGGGATG
Product: branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MRQINALITNTRGASPVSIILGVVILAGLFLFPKAVESPYALHIMILFFLSTIMGESWNIVGGYTGQYSVGHAAYFGAGA YTTMVLMQFKQIPPWYGMIAGIAVALVVSLIIGSICFRLRGPYFVLASIAVAEIMRLCAMNLKDLTNGAEGILATDIPPF TLGGTVITDFLSKVPFYYIGLVIAILTIAVTYLVQHSKLGYYFQAIREDQDAAHSLGINLSIYKNIALAISAVFTSLAGS FYAIYIGFIDPPTVLALDISVQIVLICIIGGIGTIWGPVVGSLVLVPLSEALRSNLIAQGIFKIGLASEESGVGIFLKDH LAHAHALIYGILVVVVILFMPDGVLGYVKKLTKKKAM
Sequences:
>Translated_357_residues MRQINALITNTRGASPVSIILGVVILAGLFLFPKAVESPYALHIMILFFLSTIMGESWNIVGGYTGQYSVGHAAYFGAGA YTTMVLMQFKQIPPWYGMIAGIAVALVVSLIIGSICFRLRGPYFVLASIAVAEIMRLCAMNLKDLTNGAEGILATDIPPF TLGGTVITDFLSKVPFYYIGLVIAILTIAVTYLVQHSKLGYYFQAIREDQDAAHSLGINLSIYKNIALAISAVFTSLAGS FYAIYIGFIDPPTVLALDISVQIVLICIIGGIGTIWGPVVGSLVLVPLSEALRSNLIAQGIFKIGLASEESGVGIFLKDH LAHAHALIYGILVVVVILFMPDGVLGYVKKLTKKKAM >Mature_357_residues MRQINALITNTRGASPVSIILGVVILAGLFLFPKAVESPYALHIMILFFLSTIMGESWNIVGGYTGQYSVGHAAYFGAGA YTTMVLMQFKQIPPWYGMIAGIAVALVVSLIIGSICFRLRGPYFVLASIAVAEIMRLCAMNLKDLTNGAEGILATDIPPF TLGGTVITDFLSKVPFYYIGLVIAILTIAVTYLVQHSKLGYYFQAIREDQDAAHSLGINLSIYKNIALAISAVFTSLAGS FYAIYIGFIDPPTVLALDISVQIVLICIIGGIGTIWGPVVGSLVLVPLSEALRSNLIAQGIFKIGLASEESGVGIFLKDH LAHAHALIYGILVVVVILFMPDGVLGYVKKLTKKKAM
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=264, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 38269; Mature: 38269
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQINALITNTRGASPVSIILGVVILAGLFLFPKAVESPYALHIMILFFLSTIMGESWNI CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCE VGGYTGQYSVGHAAYFGAGAYTTMVLMQFKQIPPWYGMIAGIAVALVVSLIIGSICFRLR ECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GPYFVLASIAVAEIMRLCAMNLKDLTNGAEGILATDIPPFTLGGTVITDFLSKVPFYYIG CCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH LVIAILTIAVTYLVQHSKLGYYFQAIREDQDAAHSLGINLSIYKNIALAISAVFTSLAGS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC FYAIYIGFIDPPTVLALDISVQIVLICIIGGIGTIWGPVVGSLVLVPLSEALRSNLIAQG EEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFKIGLASEESGVGIFLKDHLAHAHALIYGILVVVVILFMPDGVLGYVKKLTKKKAM HHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRQINALITNTRGASPVSIILGVVILAGLFLFPKAVESPYALHIMILFFLSTIMGESWNI CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCE VGGYTGQYSVGHAAYFGAGAYTTMVLMQFKQIPPWYGMIAGIAVALVVSLIIGSICFRLR ECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GPYFVLASIAVAEIMRLCAMNLKDLTNGAEGILATDIPPFTLGGTVITDFLSKVPFYYIG CCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH LVIAILTIAVTYLVQHSKLGYYFQAIREDQDAAHSLGINLSIYKNIALAISAVFTSLAGS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC FYAIYIGFIDPPTVLALDISVQIVLICIIGGIGTIWGPVVGSLVLVPLSEALRSNLIAQG EEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFKIGLASEESGVGIFLKDHLAHAHALIYGILVVVVILFMPDGVLGYVKKLTKKKAM HHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]