Click here to switch to the map view.

The map label for this gene is 39997002

Identifier: 39997002

GI number: 39997002

Start: 2082217

End: 2083245

Strand: Direct

Name: 39997002

Synonym: GSU1904

Alternate gene names: NA

Gene position: 2082217-2083245 (Clockwise)

Preceding gene: 39996995

Following gene: 39997003

Centisome position: 54.59

GC content: 53.55

Gene sequence:

>1029_bases
ATGGAACTGAGCTTTACGCGCACCAATGGCGAAATCGACACACTCATTGACACACTGATGGAGAAGGCTGGAACCATCCA
TCACCCTACCCTGATACGTGAAATGATCATTTCCGCTCTCAAATCGGGCCAGGAAACAAGCTATCCCGCAGACCTCAAAC
TGCTCAACAACACCATGAAGGAGATGCGCTACACAACCAACGTGTTCGCCCCCTACCGCAATAGCCGGAAAGTGACCATC
TTCGGCTCGGCCCGTACGGAGCCCCAGGAGCCGATTTATCAGACCTGCGTCCGCTTTAGCCGAAAACTTGCCGACAAGGG
GTACATGATTATCACCGGCGGAGGCCCGGGTATCATGCAAGCCGGAAATGAAGGCGCCGGCAGCGACCGCTCCTTTGCCG
TAAACATCCGCCTTCCCTTCGAACAGAAGCCCAACCCCGTGATGCTCCAGAATCCGCGACTCATAAATTACAAGTACTTC
TTCAACCGGAAAGTCGCCTTTGTCAAGGAGTCGAACGCAATCGCCGTTTTCCCCGGCGGATTCGGCACGCTTGACGAAGC
CATGGAAGTCTTCACCCTCATCCAGACGGGCAAGACCTCTCCCAAACCCCTTGTTCTTATCGACGACAGTGACGGTTACT
GGGATCGCTGGTTCGATTTCGTCACCTCGTGCATCCTCGGCAAAGGGTTCATCTCTGCGGAGGATTTCTCCATTTTCACC
ATTACCCGCGACGAGGATGAGGCCATCAGGGTCATCGAAGAGTTCTACCACAACTACCACTCCCTCCGATTCTTCGAAGA
GAGGCTCATCATCCGGCTCAACAAAGAACTAACTCGGGAACAGATCGATGAACTCGAAAATGAATTCCCCGAATTGCGCC
TGCCGGGCACTCGCATAAGCTGCTGCCCCCCACTCCCCGAAGAGGCTGATGAGCCCGACCTGCTTAAACTGCCTCGCATC
TCGCTTCAGTTCGACCATCAACACTACGGGCTCCTTATAGCTTTCATCAGAAAAATCAACATGTTTTAA

Upstream 100 bases:

>100_bases
AAATCAATGTAATATTTGTTCGACGCGGTTTAACATTTGCTTGCACCACAGCAGACATGCTAGGATACGCAAATTTTTCA
CGGGGAGACGTCTGCGAGAC

Downstream 100 bases:

>100_bases
CACAAAGAATCCATCCATGAAACGGGGCAAAATTTTGTTGACAGGATGAATTGCCAGTGTTAGTGTGACAATGCAGCAAG
TTTCGGAAGTTGTTGCAGCC

Product: decarboxylase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MELSFTRTNGEIDTLIDTLMEKAGTIHHPTLIREMIISALKSGQETSYPADLKLLNNTMKEMRYTTNVFAPYRNSRKVTI
FGSARTEPQEPIYQTCVRFSRKLADKGYMIITGGGPGIMQAGNEGAGSDRSFAVNIRLPFEQKPNPVMLQNPRLINYKYF
FNRKVAFVKESNAIAVFPGGFGTLDEAMEVFTLIQTGKTSPKPLVLIDDSDGYWDRWFDFVTSCILGKGFISAEDFSIFT
ITRDEDEAIRVIEEFYHNYHSLRFFEERLIIRLNKELTREQIDELENEFPELRLPGTRISCCPPLPEEADEPDLLKLPRI
SLQFDHQHYGLLIAFIRKINMF

Sequences:

>Translated_342_residues
MELSFTRTNGEIDTLIDTLMEKAGTIHHPTLIREMIISALKSGQETSYPADLKLLNNTMKEMRYTTNVFAPYRNSRKVTI
FGSARTEPQEPIYQTCVRFSRKLADKGYMIITGGGPGIMQAGNEGAGSDRSFAVNIRLPFEQKPNPVMLQNPRLINYKYF
FNRKVAFVKESNAIAVFPGGFGTLDEAMEVFTLIQTGKTSPKPLVLIDDSDGYWDRWFDFVTSCILGKGFISAEDFSIFT
ITRDEDEAIRVIEEFYHNYHSLRFFEERLIIRLNKELTREQIDELENEFPELRLPGTRISCCPPLPEEADEPDLLKLPRI
SLQFDHQHYGLLIAFIRKINMF
>Mature_342_residues
MELSFTRTNGEIDTLIDTLMEKAGTIHHPTLIREMIISALKSGQETSYPADLKLLNNTMKEMRYTTNVFAPYRNSRKVTI
FGSARTEPQEPIYQTCVRFSRKLADKGYMIITGGGPGIMQAGNEGAGSDRSFAVNIRLPFEQKPNPVMLQNPRLINYKYF
FNRKVAFVKESNAIAVFPGGFGTLDEAMEVFTLIQTGKTSPKPLVLIDDSDGYWDRWFDFVTSCILGKGFISAEDFSIFT
ITRDEDEAIRVIEEFYHNYHSLRFFEERLIIRLNKELTREQIDELENEFPELRLPGTRISCCPPLPEEADEPDLLKLPRI
SLQFDHQHYGLLIAFIRKINMF

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39294; Mature: 39294

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSFTRTNGEIDTLIDTLMEKAGTIHHPTLIREMIISALKSGQETSYPADLKLLNNTMK
CCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
EMRYTTNVFAPYRNSRKVTIFGSARTEPQEPIYQTCVRFSRKLADKGYMIITGGGPGIMQ
HHHHHHHEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
AGNEGAGSDRSFAVNIRLPFEQKPNPVMLQNPRLINYKYFFNRKVAFVKESNAIAVFPGG
CCCCCCCCCCEEEEEEEECCCCCCCCEEEECCEEEEEEEEECCEEEEEECCCEEEEECCC
FGTLDEAMEVFTLIQTGKTSPKPLVLIDDSDGYWDRWFDFVTSCILGKGFISAEDFSIFT
CCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE
ITRDEDEAIRVIEEFYHNYHSLRFFEERLIIRLNKELTREQIDELENEFPELRLPGTRIS
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEECCCCEEE
CCPPLPEEADEPDLLKLPRISLQFDHQHYGLLIAFIRKINMF
CCCCCCCCCCCCCCEECCCEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELSFTRTNGEIDTLIDTLMEKAGTIHHPTLIREMIISALKSGQETSYPADLKLLNNTMK
CCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
EMRYTTNVFAPYRNSRKVTIFGSARTEPQEPIYQTCVRFSRKLADKGYMIITGGGPGIMQ
HHHHHHHEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
AGNEGAGSDRSFAVNIRLPFEQKPNPVMLQNPRLINYKYFFNRKVAFVKESNAIAVFPGG
CCCCCCCCCCEEEEEEEECCCCCCCCEEEECCEEEEEEEEECCEEEEEECCCEEEEECCC
FGTLDEAMEVFTLIQTGKTSPKPLVLIDDSDGYWDRWFDFVTSCILGKGFISAEDFSIFT
CCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE
ITRDEDEAIRVIEEFYHNYHSLRFFEERLIIRLNKELTREQIDELENEFPELRLPGTRIS
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEECCCCEEE
CCPPLPEEADEPDLLKLPRISLQFDHQHYGLLIAFIRKINMF
CCCCCCCCCCCCCCEECCCEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA