Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is cysH [H]
Identifier: 39996815
GI number: 39996815
Start: 1880436
End: 1881143
Strand: Direct
Name: cysH [H]
Synonym: GSU1716
Alternate gene names: 39996815
Gene position: 1880436-1881143 (Clockwise)
Preceding gene: 39996811
Following gene: 39996816
Centisome position: 49.3
GC content: 62.43
Gene sequence:
>708_bases ATGGCCATAGAGAAGCATTCATCACTGCCCCAGATCCCTGAAAATGCCACTCCACTGGAGATACTCAGAATTGGTATCGA AGCGGCGGGCGGTGCCGTGAGCCTTGCCTGCTCCTTTTCAGTCGAAGACGTAATCATCATCGACCTGATCACGTCCCATG ATCTTCCGGTGGGAATCTTCGCCATAGACACCGGGCGGCTTCCCGAGGAGACCCATGAGGTCGCCGAGGCTATCGTCTCC AGGTACGGAGTGGGCATTGACTGGTATTTCCCCCGCAACGACGAGGTGGAGCGGCTGCTGCGGGGGAAAGGGCCGTTTTC GTTCCGTGAAAGCCTTGTCAATCGCCACCAGTGTTGTCATATCCGCAAAGTGGAGCCGCTGGGGCGTGCCCTGGCGGGGC TGGCCGGCTGGGTGACGGGCGTGCGGCGGGCCCACGGTGTGACACGGGCTAATCTCGCTCCTCTTGAGATTGATGACACC AACGGCGGTATCGTGAAGATCAATCCCCTCCTGGACTGGACCGACTCCCAGGTATGGGCGTATGCGGAGGCACGGCGGCT ACCGGTGAATCGCCTCCATCACCAGGGGTATCCGTCCATCGGCTGCGCCCCCTGCACCCGGGCCGTTACCCCAGGCCAGC CCCCCCGGTCGGGGCGCTGGTGGTGGGAAGATCCTGAGCACAAGGAATGCGGGCTGCACCGGCGCTGA
Upstream 100 bases:
>100_bases TCATTATCACTTATATCAAGTTTGATTGTTGGCAATATTGAATTTGTACACTTAATTATACGTATTTAGCCACGCTCGAG ATCAAGAAGGGGAATAGCCC
Downstream 100 bases:
>100_bases CGCTAACAAGACATCCAATCGGAGAGAATGAACCATGAACAGCCATCTTGACGAACTCGAAGCGCAATCCATCTACATCT TTCGCGAGGCATACCGGAAG
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAIEKHSSLPQIPENATPLEILRIGIEAAGGAVSLACSFSVEDVIIIDLITSHDLPVGIFAIDTGRLPEETHEVAEAIVS RYGVGIDWYFPRNDEVERLLRGKGPFSFRESLVNRHQCCHIRKVEPLGRALAGLAGWVTGVRRAHGVTRANLAPLEIDDT NGGIVKINPLLDWTDSQVWAYAEARRLPVNRLHHQGYPSIGCAPCTRAVTPGQPPRSGRWWWEDPEHKECGLHRR
Sequences:
>Translated_235_residues MAIEKHSSLPQIPENATPLEILRIGIEAAGGAVSLACSFSVEDVIIIDLITSHDLPVGIFAIDTGRLPEETHEVAEAIVS RYGVGIDWYFPRNDEVERLLRGKGPFSFRESLVNRHQCCHIRKVEPLGRALAGLAGWVTGVRRAHGVTRANLAPLEIDDT NGGIVKINPLLDWTDSQVWAYAEARRLPVNRLHHQGYPSIGCAPCTRAVTPGQPPRSGRWWWEDPEHKECGLHRR >Mature_234_residues AIEKHSSLPQIPENATPLEILRIGIEAAGGAVSLACSFSVEDVIIIDLITSHDLPVGIFAIDTGRLPEETHEVAEAIVSR YGVGIDWYFPRNDEVERLLRGKGPFSFRESLVNRHQCCHIRKVEPLGRALAGLAGWVTGVRRAHGVTRANLAPLEIDDTN GGIVKINPLLDWTDSQVWAYAEARRLPVNRLHHQGYPSIGCAPCTRAVTPGQPPRSGRWWWEDPEHKECGLHRR
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=205, Percent_Identity=26.8292682926829, Blast_Score=79, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6325425, Length=235, Percent_Identity=31.4893617021277, Blast_Score=89, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011798 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 26094; Mature: 25963
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEKHSSLPQIPENATPLEILRIGIEAAGGAVSLACSFSVEDVIIIDLITSHDLPVGIF CCCCCCCCCCCCCCCCCHHHHHEEHHHCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEE AIDTGRLPEETHEVAEAIVSRYGVGIDWYFPRNDEVERLLRGKGPFSFRESLVNRHQCCH EEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC IRKVEPLGRALAGLAGWVTGVRRAHGVTRANLAPLEIDDTNGGIVKINPLLDWTDSQVWA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEEE YAEARRLPVNRLHHQGYPSIGCAPCTRAVTPGQPPRSGRWWWEDPEHKECGLHRR HHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AIEKHSSLPQIPENATPLEILRIGIEAAGGAVSLACSFSVEDVIIIDLITSHDLPVGIF CCCCCCCCCCCCCCCCHHHHHEEHHHCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEE AIDTGRLPEETHEVAEAIVSRYGVGIDWYFPRNDEVERLLRGKGPFSFRESLVNRHQCCH EEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC IRKVEPLGRALAGLAGWVTGVRRAHGVTRANLAPLEIDDTNGGIVKINPLLDWTDSQVWA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEEE YAEARRLPVNRLHHQGYPSIGCAPCTRAVTPGQPPRSGRWWWEDPEHKECGLHRR HHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]