Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is cysD [H]
Identifier: 39996816
GI number: 39996816
Start: 1881178
End: 1881981
Strand: Direct
Name: cysD [H]
Synonym: GSU1717
Alternate gene names: 39996816
Gene position: 1881178-1881981 (Clockwise)
Preceding gene: 39996815
Following gene: 39996817
Centisome position: 49.32
GC content: 61.32
Gene sequence:
>804_bases ATGAACAGCCATCTTGACGAACTCGAAGCGCAATCCATCTACATCTTTCGCGAGGCATACCGGAAGTTCGAGAATCTCGC CATGCTCTATTCGGTGGGCAAAGACTCCACCACCATGATCCATTTGGCCCGCAAGGCCTTTTTCGGACGAATTCCCTTTC CGCTGGTGCACATCGACACCACCTACAAATATCCGGAAATGATCGAATATCGGGACCGCATGGCACGGGAGTGGGGCGCG GACCTGATCGTCGGGCGCAACGAATCGGCCATTGCCGCCGGCACGGGGCCCGAACAGGGGAGACTCGACTGCTGCGCCAA GCTCAAGACCGACGGCCTGAGTCAGACCATCGAGCGTCACGGTTTCAACGGCCTCTTTCTCGGCATCCGCCGGGACGAGG AGGGAAGCCGGGCCAAGGAACGGGTTTTTTCGCCCCGCGACAAGAACTTCGAGTGGTCCTACAAGGACCAGCCGCCCGAA CTGTGGGACCAGTTCAACACGACCTTTGCGCCGGGCACCCACATCCGGGTCCACCCGATCCTGCACTGGACCGAACTGGA CATCTGGCTCTACATCCAGCGGGAAGGGATCGAACTCTGCCCCCTGTACTTCGCCCGGGACGGCAAACGGTTCCGCTCCC TCGGCTGCATGCCCTGCACCGGCCCCATCCAGTCGAACGCCGTCACGGTGGAGGAGATCATCGAGGAGCTCCGCGCCATC AAGACACCGGAGCGGGCCGGCCGGGCCCAGGACCAGGAAAACACCTATGCCATGCAGAAGCTGCGGGCCAAGGGCTACAT GTAA
Upstream 100 bases:
>100_bases CCCCGGTCGGGGCGCTGGTGGTGGGAAGATCCTGAGCACAAGGAATGCGGGCTGCACCGGCGCTGACGCTAACAAGACAT CCAATCGGAGAGAATGAACC
Downstream 100 bases:
>100_bases GCGGGTAACCGGGTAAGGAGATACGATATGAGCCAGTCTGAAACACTGAAGATAGTTATTGTGGGGCATGTTGACCACGG CAAGTCAACCCTGATCGGCC
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNSHLDELEAQSIYIFREAYRKFENLAMLYSVGKDSTTMIHLARKAFFGRIPFPLVHIDTTYKYPEMIEYRDRMAREWGA DLIVGRNESAIAAGTGPEQGRLDCCAKLKTDGLSQTIERHGFNGLFLGIRRDEEGSRAKERVFSPRDKNFEWSYKDQPPE LWDQFNTTFAPGTHIRVHPILHWTELDIWLYIQREGIELCPLYFARDGKRFRSLGCMPCTGPIQSNAVTVEEIIEELRAI KTPERAGRAQDQENTYAMQKLRAKGYM
Sequences:
>Translated_267_residues MNSHLDELEAQSIYIFREAYRKFENLAMLYSVGKDSTTMIHLARKAFFGRIPFPLVHIDTTYKYPEMIEYRDRMAREWGA DLIVGRNESAIAAGTGPEQGRLDCCAKLKTDGLSQTIERHGFNGLFLGIRRDEEGSRAKERVFSPRDKNFEWSYKDQPPE LWDQFNTTFAPGTHIRVHPILHWTELDIWLYIQREGIELCPLYFARDGKRFRSLGCMPCTGPIQSNAVTVEEIIEELRAI KTPERAGRAQDQENTYAMQKLRAKGYM >Mature_267_residues MNSHLDELEAQSIYIFREAYRKFENLAMLYSVGKDSTTMIHLARKAFFGRIPFPLVHIDTTYKYPEMIEYRDRMAREWGA DLIVGRNESAIAAGTGPEQGRLDCCAKLKTDGLSQTIERHGFNGLFLGIRRDEEGSRAKERVFSPRDKNFEWSYKDQPPE LWDQFNTTFAPGTHIRVHPILHWTELDIWLYIQREGIELCPLYFARDGKRFRSLGCMPCTGPIQSNAVTVEEIIEELRAI KTPERAGRAQDQENTYAMQKLRAKGYM
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=295, Percent_Identity=44.7457627118644, Blast_Score=251, Evalue=4e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 30965; Mature: 30965
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSHLDELEAQSIYIFREAYRKFENLAMLYSVGKDSTTMIHLARKAFFGRIPFPLVHIDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC TYKYPEMIEYRDRMAREWGADLIVGRNESAIAAGTGPEQGRLDCCAKLKTDGLSQTIERH CCCCHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHC GFNGLFLGIRRDEEGSRAKERVFSPRDKNFEWSYKDQPPELWDQFNTTFAPGTHIRVHPI CCCEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEE LHWTELDIWLYIQREGIELCPLYFARDGKRFRSLGCMPCTGPIQSNAVTVEEIIEELRAI EEEEEEEEEEEEEECCCEEEEHHHHCCCHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHH KTPERAGRAQDQENTYAMQKLRAKGYM CCCHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNSHLDELEAQSIYIFREAYRKFENLAMLYSVGKDSTTMIHLARKAFFGRIPFPLVHIDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC TYKYPEMIEYRDRMAREWGADLIVGRNESAIAAGTGPEQGRLDCCAKLKTDGLSQTIERH CCCCHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHC GFNGLFLGIRRDEEGSRAKERVFSPRDKNFEWSYKDQPPELWDQFNTTFAPGTHIRVHPI CCCEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEE LHWTELDIWLYIQREGIELCPLYFARDGKRFRSLGCMPCTGPIQSNAVTVEEIIEELRAI EEEEEEEEEEEEEECCCEEEEHHHHCCCHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHH KTPERAGRAQDQENTYAMQKLRAKGYM CCCHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA