Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is yaiE [C]
Identifier: 39996430
GI number: 39996430
Start: 1453592
End: 1453906
Strand: Direct
Name: yaiE [C]
Synonym: GSU1328
Alternate gene names: 39996430
Gene position: 1453592-1453906 (Clockwise)
Preceding gene: 39996429
Following gene: 39996431
Centisome position: 38.11
GC content: 61.59
Gene sequence:
>315_bases ATGTCCGAATTCACCAACGTAACCATCATCCGCGAGGCCAACGTCTACTTCGACGGCGGCGTCGTGAGCCGCACCGTCGT GTTCCCCGACGGCACGAAGAAGACCCTCGGCATCATGCAGCCGGGCGAGTACACCTTCACCACCGGCGCGCCCGAGATCA TGGAGATCCTTTCCGGCGAGCTGGATCTCAAGCTGCCGGGCAGCGATGCGTGGAACCGCGTCGGCGGGGGTGAGTCCTTC GATGTGCCGGCCAATTCATCCTTTACCATGAAGGTGCTGTCCCTTACCGATTACTGCTGCTCGTTCCTCGGCTAG
Upstream 100 bases:
>100_bases CGGCACCGACGGCCGGCACATCGAATGTCTGGCGGCTGAGCTCTCCGGCTCTCCCGTCCGCTGATCAGTACGACCACTTA TCACACAGAGGAGGAACACC
Downstream 100 bases:
>100_bases GCCGGCATCGTCTCGAACCGCTCCGGCAGACCGCCCATGTGCGTCCCTTCCACCCCCCAGCCGCCGGTTATCGGCCGCTT CGCCCCGTCCCCCACGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSEFTNVTIIREANVYFDGGVVSRTVVFPDGTKKTLGIMQPGEYTFTTGAPEIMEILSGELDLKLPGSDAWNRVGGGESF DVPANSSFTMKVLSLTDYCCSFLG
Sequences:
>Translated_104_residues MSEFTNVTIIREANVYFDGGVVSRTVVFPDGTKKTLGIMQPGEYTFTTGAPEIMEILSGELDLKLPGSDAWNRVGGGESF DVPANSSFTMKVLSLTDYCCSFLG >Mature_103_residues SEFTNVTIIREANVYFDGGVVSRTVVFPDGTKKTLGIMQPGEYTFTTGAPEIMEILSGELDLKLPGSDAWNRVGGGESFD VPANSSFTMKVLSLTDYCCSFLG
Specific function: Unknown
COG id: COG3123
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0345 family
Homologues:
Organism=Escherichia coli, GI1786590, Length=92, Percent_Identity=36.9565217391304, Blast_Score=70, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1328_GEOSL (Q74DI8)
Other databases:
- EMBL: AE017180 - RefSeq: NP_952381.1 - ProteinModelPortal: Q74DI8 - SMR: Q74DI8 - GeneID: 2688042 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU1328 - NMPDR: fig|243231.1.peg.1319 - TIGR: GSU1328 - HOGENOM: HBG297920 - OMA: TFNTGAP - ProtClustDB: CLSK828304 - BioCyc: GSUL243231:GSU_1328-MONOMER - HAMAP: MF_01537 - InterPro: IPR009664 - InterPro: IPR014710 - Gene3D: G3DSA:2.60.120.10
Pfam domain/function: PF06865 DUF1255
EC number: NA
Molecular weight: Translated: 11228; Mature: 11097
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFTNVTIIREANVYFDGGVVSRTVVFPDGTKKTLGIMQPGEYTFTTGAPEIMEILSGE CCCCCEEEEEEECCEEECCCEEEEEEECCCCCCCEEEEECCCCEEEECCCHHHHHHHCCC LDLKLPGSDAWNRVGGGESFDVPANSSFTMKVLSLTDYCCSFLG CEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCC >Mature Secondary Structure SEFTNVTIIREANVYFDGGVVSRTVVFPDGTKKTLGIMQPGEYTFTTGAPEIMEILSGE CCCCEEEEEEECCEEECCCEEEEEEECCCCCCCEEEEECCCCEEEECCCHHHHHHHCCC LDLKLPGSDAWNRVGGGESFDVPANSSFTMKVLSLTDYCCSFLG CEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA