| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995631
Identifier: 39995631
GI number: 39995631
Start: 558887
End: 559594
Strand: Reverse
Name: 39995631
Synonym: GSU0524
Alternate gene names: NA
Gene position: 559594-558887 (Counterclockwise)
Preceding gene: 39995632
Following gene: 39995630
Centisome position: 14.67
GC content: 65.82
Gene sequence:
>708_bases GTGAAGATCATCCTCAGAAACCTGGCAACAGTCTTCGGGGCAGTGGGGCCGTCGCCCCGGCGGTTCGTGGAGGAGTTCGA GCCGGAGGCGGGGATGCGGCTCTTTGCCGGCTTCAAGCACCGCTTCAATGACGGCCGTGACCTCTGTGCCCTTTTCCTGG CCGCCCGGACCATGATCGAGGAGGCCGACACCATCGGCGACTTCTTCCTGGGGTGCCACGACCCGGAGGCCGAGGATATC ACCCCCTCCCTCACGGAGTTCAGCTCAGCGATCCTCGCCTTCGACTATTCCCCCGTCTTCGGCACCGCCGCCATCCCGGC CGATTCGGCCTTCCCCTTCTTCTTTCCCTCCCCGGCCTCGGGCAGTGCCTGCAAACGGTTGTGCATGTTCCTGCGCTGGA TGGTGCGTGCCGACGACGGCATCGACCTGGGCCTCTGGAAGGAGATTTCGCCGGCACAACTCGTGATCCCGGTGGACACG CACATCCACCGCATCGCCCGAAACCTGGGCCTCACCGCCCGGCGGCAGGCCGACTGGCGCACAGCCAGGGAGATCACGGC AGCGCTGCGGCGCCTCGATCCCGACGATCCGGTGAAGTACGACTTTTCCCTCTGCCACCTGGGAATCTCCGAGGGGTGCG ACGGCACGGTGACCCCTCTCTGCGAGGCATGCCCGGTGGTGAAATGCTGCGCCGGAGAGCTGTCATGA
Upstream 100 bases:
>100_bases CCACCTGGCGAACGACCCCCTTTCCTTCTGCCACCGCTACGCCTCCCCGGCGGACCGGGAGATTGCGGGACTTCTGGCGT CATGCCTCGCCTACGGCAAC
Downstream 100 bases:
>100_bases GCGGCGCGCCCACGGTCATTCTCGCCTCTTTCGATGCCGAGCGGCATTCGGCCTCGTACCGGTTCGAGGAGTTTGTGGAA GCCGTGACGGCCCTGACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKIILRNLATVFGAVGPSPRRFVEEFEPEAGMRLFAGFKHRFNDGRDLCALFLAARTMIEEADTIGDFFLGCHDPEAEDI TPSLTEFSSAILAFDYSPVFGTAAIPADSAFPFFFPSPASGSACKRLCMFLRWMVRADDGIDLGLWKEISPAQLVIPVDT HIHRIARNLGLTARRQADWRTAREITAALRRLDPDDPVKYDFSLCHLGISEGCDGTVTPLCEACPVVKCCAGELS
Sequences:
>Translated_235_residues MKIILRNLATVFGAVGPSPRRFVEEFEPEAGMRLFAGFKHRFNDGRDLCALFLAARTMIEEADTIGDFFLGCHDPEAEDI TPSLTEFSSAILAFDYSPVFGTAAIPADSAFPFFFPSPASGSACKRLCMFLRWMVRADDGIDLGLWKEISPAQLVIPVDT HIHRIARNLGLTARRQADWRTAREITAALRRLDPDDPVKYDFSLCHLGISEGCDGTVTPLCEACPVVKCCAGELS >Mature_235_residues MKIILRNLATVFGAVGPSPRRFVEEFEPEAGMRLFAGFKHRFNDGRDLCALFLAARTMIEEADTIGDFFLGCHDPEAEDI TPSLTEFSSAILAFDYSPVFGTAAIPADSAFPFFFPSPASGSACKRLCMFLRWMVRADDGIDLGLWKEISPAQLVIPVDT HIHRIARNLGLTARRQADWRTAREITAALRRLDPDDPVKYDFSLCHLGISEGCDGTVTPLCEACPVVKCCAGELS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25879; Mature: 25879
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIILRNLATVFGAVGPSPRRFVEEFEPEAGMRLFAGFKHRFNDGRDLCALFLAARTMIE CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EADTIGDFFLGCHDPEAEDITPSLTEFSSAILAFDYSPVFGTAAIPADSAFPFFFPSPAS HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GSACKRLCMFLRWMVRADDGIDLGLWKEISPAQLVIPVDTHIHRIARNLGLTARRQADWR CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHH TAREITAALRRLDPDDPVKYDFSLCHLGISEGCDGTVTPLCEACPVVKCCAGELS HHHHHHHHHHHCCCCCCCEECHHHHCCCCCCCCCCCCCHHHHHCCHHHHHCCCCC >Mature Secondary Structure MKIILRNLATVFGAVGPSPRRFVEEFEPEAGMRLFAGFKHRFNDGRDLCALFLAARTMIE CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EADTIGDFFLGCHDPEAEDITPSLTEFSSAILAFDYSPVFGTAAIPADSAFPFFFPSPAS HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GSACKRLCMFLRWMVRADDGIDLGLWKEISPAQLVIPVDTHIHRIARNLGLTARRQADWR CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHH TAREITAALRRLDPDDPVKYDFSLCHLGISEGCDGTVTPLCEACPVVKCCAGELS HHHHHHHHHHHCCCCCCCEECHHHHCCCCCCCCCCCCCHHHHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA