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The map label for this gene is sfrB [H]

Identifier: 39995617

GI number: 39995617

Start: 542195

End: 544213

Strand: Reverse

Name: sfrB [H]

Synonym: GSU0510

Alternate gene names: 39995617

Gene position: 544213-542195 (Counterclockwise)

Preceding gene: 39995621

Following gene: 39995616

Centisome position: 14.27

GC content: 60.62

Gene sequence:

>2019_bases
GTGGCACAGGTGGTTTTTTCCAGCTGGGGAAGAACAATCGTCGATAACCGCAAGGGGGGAGAAGCCCAGGACGTGAGCTT
CCGCCTTCCGACCACCCTCGATGGCGAGCGGCAGATTGCCGCGTTCATGGGGTGGGATGGGATCATCCTTTACGACCTGA
AGGTTGACGTGCCGGCCATGGCGGCCGAATATATGAAGCGCGTGCAGACCCAGTATTGCTGCGGCAAGTGCACCCCCGGC
AAAAAGGGGACCAAGGTTCTTGCCGACGTTTTGGCGGCCATCATTGAGGGGCGGGCCACAGAGGCAGACCTCGACACCAT
CGACGATCTGGCGGACCTGCTCACCAATTGCAAGTGCACCCTCTGCCAAAGCTCAACGATCCCGGTTCTCGATGCAGTGA
AACACTTCCGGGAAGATTTCCTCGCCTATATCACCGGCATCCGCAAACCCGCCAACGTACACCGGTTCATCGACAAGTAC
ACCGCCCCCTGCATGGACCGCTGCCCGGCCCATATCGACATTCCCGCCTACATCGAGGCGATCAAGGAATACCGATTCGA
TGAGTCGCTTGATATCATCCGCGACAACATGCCGTTGCCGTCGGTCTGCGGCAGGGTGTGCCCGCACCCCTGCGAGACCC
ACTGTCGCCGCAAGAACGTGGACGACTCGGTCAACATCATGGTGCTCAAGCGTTCCGCCTCCGACTACGAGTGGATGCAC
AACGCAGCCCCCCCCATGCAACCCAAGCCGCAAAAAAACAAGAAAGTCGCCATTGTCGGGGCCGGCCCGGCAGGCCTTGC
CTGCGCCTACTACCTGGCCCTTGAAGGATATCCCTGCACCATCTACGAGGCCCTGCCCGAAGGATACGGCGGCGGTATGA
TCGCCGTCGGCATCCCCCCCTACCGCCAACCGCGGCACCTGCTCCAACGCGATATCGACATCATTTCCTCCATGGGTGTG
GATATCATCTATGACACCCGCATCGGCAAAGACATCTCCCTAGAAGAGCTCAAGCAGAAATTCGACGCCGTCTTCCTGGC
ACCAGGCGCCCACCGCTCCAAGCCCATGGGCGTCGAGGGAGAAGACAAGGGCTACAAGGGCTTCCTGAAGGGCGGTATCG
ACTTTCTCCGGGAAGCCTACATGGGACGCCCCACCGGCATGGGGAAAAAGGTGGTCGTGGTTGGCGGCGGCAACACTGCC
ATTGACTGCGTGCGGGTTGCTCTCCGGGAAGGAGCGGAAGAATCCACACTTCTCTATCGTCGTTCGCGCAAGGAAATGCC
GGCCGACGTATGGGAAGTGGACGGTGCCGACGAAGAAGGGGTACGATTTGAGTTCCAGGTCCTCCCCACACGGGTACTCG
TGGATGAGAACGAGCAGGTGACCGGTGTGGAATGTGTCCGAATGGCCCTCGGTGAGCCTGACGCCTCGGGGAGGCGCCGG
CCCGAGCCGGTTCCCGGCAGCGAGTTCGTGGTCGAGTGTGACACCGTCATCCCGGCCATTGGCCAGGATCCCGATCTTTC
CTTCATCCCCGACAACCTGGGAATCGACATCACCAAGTGGAACACCGTTGTCACCAAGTACGTTCCTCTCAAGGATGCGG
CGGGCAAGGACTTGAAAGACGGCATGGGCAACCCCCTTGCACGGGTACTCATCACTGACCTTGAGGGTGTTTTCGCGGGC
GGCGATGCCGAAATAGGCCCCCTGACCGTCGTCGCCTGCATTGGAAATGCACATCGGGCCGCGCGGGTGATTCAGCGCTG
GCTTGAAGAAGGAAAGGCATACCTTACCGAGGACGAACTCATGGAGGACATCCTCACGAACATGCCGGTCTACGACAAGA
ACGAAAAGGTTCCCTGGCTCGACTCCCGGGAGCGGGCCCACCAAGCCGAGGTCCACGGCCAAGAGCGGGCGAGCAAGGGC
AACTACCAGGAAGTGGAACTCGGCTTTGTCGATACCCAGGCAGTGGAGGAAGCAGAGCGCTGCCTCCGGTGCTACCGGGT
CGCCATGGCCGCCATTTAG

Upstream 100 bases:

>100_bases
AGTGCATACTGTATACACTTTGCAAAGCAATATTTGTTTTGTAAATTCAAAAAGTTAAGCATCGTCGACCATCTCTGCGA
AGGTCTGAACGGAGGCGTAC

Downstream 100 bases:

>100_bases
TCCATCACATTCAGCATGCCACTTCGGCCCACGGCCGGGGCCACGGCGGCCCGGGTATCGGCAACGATCCCGGGCGTCGG
TGCGTTCCCGGCCGGGAGCC

Product: Fe(III) reductase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 672; Mature: 671

Protein sequence:

>672_residues
MAQVVFSSWGRTIVDNRKGGEAQDVSFRLPTTLDGERQIAAFMGWDGIILYDLKVDVPAMAAEYMKRVQTQYCCGKCTPG
KKGTKVLADVLAAIIEGRATEADLDTIDDLADLLTNCKCTLCQSSTIPVLDAVKHFREDFLAYITGIRKPANVHRFIDKY
TAPCMDRCPAHIDIPAYIEAIKEYRFDESLDIIRDNMPLPSVCGRVCPHPCETHCRRKNVDDSVNIMVLKRSASDYEWMH
NAAPPMQPKPQKNKKVAIVGAGPAGLACAYYLALEGYPCTIYEALPEGYGGGMIAVGIPPYRQPRHLLQRDIDIISSMGV
DIIYDTRIGKDISLEELKQKFDAVFLAPGAHRSKPMGVEGEDKGYKGFLKGGIDFLREAYMGRPTGMGKKVVVVGGGNTA
IDCVRVALREGAEESTLLYRRSRKEMPADVWEVDGADEEGVRFEFQVLPTRVLVDENEQVTGVECVRMALGEPDASGRRR
PEPVPGSEFVVECDTVIPAIGQDPDLSFIPDNLGIDITKWNTVVTKYVPLKDAAGKDLKDGMGNPLARVLITDLEGVFAG
GDAEIGPLTVVACIGNAHRAARVIQRWLEEGKAYLTEDELMEDILTNMPVYDKNEKVPWLDSRERAHQAEVHGQERASKG
NYQEVELGFVDTQAVEEAERCLRCYRVAMAAI

Sequences:

>Translated_672_residues
MAQVVFSSWGRTIVDNRKGGEAQDVSFRLPTTLDGERQIAAFMGWDGIILYDLKVDVPAMAAEYMKRVQTQYCCGKCTPG
KKGTKVLADVLAAIIEGRATEADLDTIDDLADLLTNCKCTLCQSSTIPVLDAVKHFREDFLAYITGIRKPANVHRFIDKY
TAPCMDRCPAHIDIPAYIEAIKEYRFDESLDIIRDNMPLPSVCGRVCPHPCETHCRRKNVDDSVNIMVLKRSASDYEWMH
NAAPPMQPKPQKNKKVAIVGAGPAGLACAYYLALEGYPCTIYEALPEGYGGGMIAVGIPPYRQPRHLLQRDIDIISSMGV
DIIYDTRIGKDISLEELKQKFDAVFLAPGAHRSKPMGVEGEDKGYKGFLKGGIDFLREAYMGRPTGMGKKVVVVGGGNTA
IDCVRVALREGAEESTLLYRRSRKEMPADVWEVDGADEEGVRFEFQVLPTRVLVDENEQVTGVECVRMALGEPDASGRRR
PEPVPGSEFVVECDTVIPAIGQDPDLSFIPDNLGIDITKWNTVVTKYVPLKDAAGKDLKDGMGNPLARVLITDLEGVFAG
GDAEIGPLTVVACIGNAHRAARVIQRWLEEGKAYLTEDELMEDILTNMPVYDKNEKVPWLDSRERAHQAEVHGQERASKG
NYQEVELGFVDTQAVEEAERCLRCYRVAMAAI
>Mature_671_residues
AQVVFSSWGRTIVDNRKGGEAQDVSFRLPTTLDGERQIAAFMGWDGIILYDLKVDVPAMAAEYMKRVQTQYCCGKCTPGK
KGTKVLADVLAAIIEGRATEADLDTIDDLADLLTNCKCTLCQSSTIPVLDAVKHFREDFLAYITGIRKPANVHRFIDKYT
APCMDRCPAHIDIPAYIEAIKEYRFDESLDIIRDNMPLPSVCGRVCPHPCETHCRRKNVDDSVNIMVLKRSASDYEWMHN
AAPPMQPKPQKNKKVAIVGAGPAGLACAYYLALEGYPCTIYEALPEGYGGGMIAVGIPPYRQPRHLLQRDIDIISSMGVD
IIYDTRIGKDISLEELKQKFDAVFLAPGAHRSKPMGVEGEDKGYKGFLKGGIDFLREAYMGRPTGMGKKVVVVGGGNTAI
DCVRVALREGAEESTLLYRRSRKEMPADVWEVDGADEEGVRFEFQVLPTRVLVDENEQVTGVECVRMALGEPDASGRRRP
EPVPGSEFVVECDTVIPAIGQDPDLSFIPDNLGIDITKWNTVVTKYVPLKDAAGKDLKDGMGNPLARVLITDLEGVFAGG
DAEIGPLTVVACIGNAHRAARVIQRWLEEGKAYLTEDELMEDILTNMPVYDKNEKVPWLDSRERAHQAEVHGQERASKGN
YQEVELGFVDTQAVEEAERCLRCYRVAMAAI

Specific function: Unknown

COG id: COG0493

COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Homo sapiens, GI119943098, Length=455, Percent_Identity=26.3736263736264, Blast_Score=119, Evalue=1e-26,
Organism=Escherichia coli, GI1788811, Length=437, Percent_Identity=37.070938215103, Blast_Score=253, Evalue=3e-68,
Organism=Escherichia coli, GI1789606, Length=440, Percent_Identity=36.8181818181818, Blast_Score=250, Evalue=2e-67,
Organism=Escherichia coli, GI87082180, Length=437, Percent_Identity=35.0114416475973, Blast_Score=236, Evalue=4e-63,
Organism=Escherichia coli, GI1789243, Length=436, Percent_Identity=36.2385321100917, Blast_Score=216, Evalue=4e-57,
Organism=Escherichia coli, GI1788468, Length=460, Percent_Identity=28.2608695652174, Blast_Score=153, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17570289, Length=482, Percent_Identity=26.1410788381743, Blast_Score=129, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI71984108, Length=283, Percent_Identity=31.4487632508834, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17543860, Length=198, Percent_Identity=28.7878787878788, Blast_Score=73, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6320030, Length=475, Percent_Identity=28.2105263157895, Blast_Score=159, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24665547, Length=448, Percent_Identity=27.0089285714286, Blast_Score=149, Evalue=7e-36,
Organism=Drosophila melanogaster, GI24665543, Length=448, Percent_Identity=27.0089285714286, Blast_Score=149, Evalue=7e-36,
Organism=Drosophila melanogaster, GI28574881, Length=448, Percent_Identity=27.0089285714286, Blast_Score=149, Evalue=8e-36,
Organism=Drosophila melanogaster, GI24665539, Length=448, Percent_Identity=27.0089285714286, Blast_Score=149, Evalue=8e-36,
Organism=Drosophila melanogaster, GI24640763, Length=334, Percent_Identity=31.7365269461078, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI18858217, Length=334, Percent_Identity=31.7365269461078, Blast_Score=119, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013027
- InterPro:   IPR012285
- InterPro:   IPR006006 [H]

Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 74274; Mature: 74143

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVVFSSWGRTIVDNRKGGEAQDVSFRLPTTLDGERQIAAFMGWDGIILYDLKVDVPAM
CCEEEEHHCCCEECCCCCCCCCCCCEEECCCCCCCCHHEEEEECCCCEEEEEEEECCHHH
AAEYMKRVQTQYCCGKCTPGKKGTKVLADVLAAIIEGRATEADLDTIDDLADLLTNCKCT
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEE
LCQSSTIPVLDAVKHFREDFLAYITGIRKPANVHRFIDKYTAPCMDRCPAHIDIPAYIEA
EECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHH
IKEYRFDESLDIIRDNMPLPSVCGRVCPHPCETHCRRKNVDDSVNIMVLKRSASDYEWMH
HHHHCCCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHH
NAAPPMQPKPQKNKKVAIVGAGPAGLACAYYLALEGYPCTIYEALPEGYGGGMIAVGIPP
CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEHHHHCCCCCCCCEEEECCCC
YRQPRHLLQRDIDIISSMGVDIIYDTRIGKDISLEELKQKFDAVFLAPGAHRSKPMGVEG
CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCEEEECCCCCCCCCCCCCC
EDKGYKGFLKGGIDFLREAYMGRPTGMGKKVVVVGGGNTAIDCVRVALREGAEESTLLYR
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHH
RSRKEMPADVWEVDGADEEGVRFEFQVLPTRVLVDENEQVTGVECVRMALGEPDASGRRR
HHHHCCCCCCEECCCCCCCCCEEEEEEECEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
PEPVPGSEFVVECDTVIPAIGQDPDLSFIPDNLGIDITKWNTVVTKYVPLKDAAGKDLKD
CCCCCCCCEEEEECHHCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCHHH
GMGNPLARVLITDLEGVFAGGDAEIGPLTVVACIGNAHRAARVIQRWLEEGKAYLTEDEL
CCCCHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHH
MEDILTNMPVYDKNEKVPWLDSRERAHQAEVHGQERASKGNYQEVELGFVDTQAVEEAER
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCEEEEEEECCHHHHHHHHH
CLRCYRVAMAAI
HHHHHHHHHHCC
>Mature Secondary Structure 
AQVVFSSWGRTIVDNRKGGEAQDVSFRLPTTLDGERQIAAFMGWDGIILYDLKVDVPAM
CEEEEHHCCCEECCCCCCCCCCCCEEECCCCCCCCHHEEEEECCCCEEEEEEEECCHHH
AAEYMKRVQTQYCCGKCTPGKKGTKVLADVLAAIIEGRATEADLDTIDDLADLLTNCKCT
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEE
LCQSSTIPVLDAVKHFREDFLAYITGIRKPANVHRFIDKYTAPCMDRCPAHIDIPAYIEA
EECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHH
IKEYRFDESLDIIRDNMPLPSVCGRVCPHPCETHCRRKNVDDSVNIMVLKRSASDYEWMH
HHHHCCCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHH
NAAPPMQPKPQKNKKVAIVGAGPAGLACAYYLALEGYPCTIYEALPEGYGGGMIAVGIPP
CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEHHHHCCCCCCCCEEEECCCC
YRQPRHLLQRDIDIISSMGVDIIYDTRIGKDISLEELKQKFDAVFLAPGAHRSKPMGVEG
CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCEEEECCCCCCCCCCCCCC
EDKGYKGFLKGGIDFLREAYMGRPTGMGKKVVVVGGGNTAIDCVRVALREGAEESTLLYR
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHH
RSRKEMPADVWEVDGADEEGVRFEFQVLPTRVLVDENEQVTGVECVRMALGEPDASGRRR
HHHHCCCCCCEECCCCCCCCCEEEEEEECEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
PEPVPGSEFVVECDTVIPAIGQDPDLSFIPDNLGIDITKWNTVVTKYVPLKDAAGKDLKD
CCCCCCCCEEEEECHHCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCHHH
GMGNPLARVLITDLEGVFAGGDAEIGPLTVVACIGNAHRAARVIQRWLEEGKAYLTEDEL
CCCCHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHH
MEDILTNMPVYDKNEKVPWLDSRERAHQAEVHGQERASKGNYQEVELGFVDTQAVEEAER
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCEEEEEEECCHHHHHHHHH
CLRCYRVAMAAI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8955321; 9205837; 9278503 [H]