| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995577
Identifier: 39995577
GI number: 39995577
Start: 498751
End: 499104
Strand: Reverse
Name: 39995577
Synonym: GSU0469
Alternate gene names: NA
Gene position: 499104-498751 (Counterclockwise)
Preceding gene: 39995578
Following gene: 39995576
Centisome position: 13.09
GC content: 71.47
Gene sequence:
>354_bases ATGACCAGAAAAGTTCTTGCAGTAGCAGTGATGGTGGCAGCCGGCGCCCTTGCCCTCGGCGGCGAGGCCATGGCTCGGGG CGGTAAGGGCCCCATGGCCGGCCAGGGGACCGGAGACCGGCTCCAGCTCCGCGACGGAAGCTGCCTCTCCAGTACGGCAA CGGCAACGGCGGCGTCAGCTGCGACCTCGTCCCGCCAGCAACTCCGTGATGGCAGCGGAGCCGGCACCGCCCGTCAGGGC GTCGGGACGGGAGCCATGAGGCGCCTCGGCCCCGGCGACGGCACCGGCAACGTAACTCCTCCCCAGGACGGCACCGGCTA CGGCTCCGCCTATACCGGCGGAACCGCCCGGTAG
Upstream 100 bases:
>100_bases ATACACCAGACACCAACCCTGGCATGGTGCGTGGAATACTGATTGACAGAGATTGTCGATCCCGCATCGACACCACTAAC CACACAGGGAGGAAAAAGAA
Downstream 100 bases:
>100_bases TCGACTCACCAAGAGGTAAGGAACAACCATGATCAGAGGCCGCTCGACCCTCATACTCACGATTCTTGTCTTCCTGGCCC TTTTCCATGCGGGAAACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTRKVLAVAVMVAAGALALGGEAMARGGKGPMAGQGTGDRLQLRDGSCLSSTATATAASAATSSRQQLRDGSGAGTARQG VGTGAMRRLGPGDGTGNVTPPQDGTGYGSAYTGGTAR
Sequences:
>Translated_117_residues MTRKVLAVAVMVAAGALALGGEAMARGGKGPMAGQGTGDRLQLRDGSCLSSTATATAASAATSSRQQLRDGSGAGTARQG VGTGAMRRLGPGDGTGNVTPPQDGTGYGSAYTGGTAR >Mature_116_residues TRKVLAVAVMVAAGALALGGEAMARGGKGPMAGQGTGDRLQLRDGSCLSSTATATAASAATSSRQQLRDGSGAGTARQGV GTGAMRRLGPGDGTGNVTPPQDGTGYGSAYTGGTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11257; Mature: 11126
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKVLAVAVMVAAGALALGGEAMARGGKGPMAGQGTGDRLQLRDGSCLSSTATATAASA CCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHH ATSSRQQLRDGSGAGTARQGVGTGAMRRLGPGDGTGNVTPPQDGTGYGSAYTGGTAR HHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRKVLAVAVMVAAGALALGGEAMARGGKGPMAGQGTGDRLQLRDGSCLSSTATATAASA CHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHH ATSSRQQLRDGSGAGTARQGVGTGAMRRLGPGDGTGNVTPPQDGTGYGSAYTGGTAR HHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA