| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is glgP [H]
Identifier: 39995479
GI number: 39995479
Start: 403252
End: 405816
Strand: Reverse
Name: glgP [H]
Synonym: GSU0371
Alternate gene names: 39995479
Gene position: 405816-403252 (Counterclockwise)
Preceding gene: 39995480
Following gene: 39995478
Centisome position: 10.64
GC content: 64.8
Gene sequence:
>2565_bases ATGGACTTCACCAAGAGAATCCACCGTTTCACCGTTGTCCCTTCCCTGTCGGGGGAACTCGCCATCCTCCAGACCCTGGC CTACAATCTCTGGTGGACGTGGGAGCCTGATGCGGTGGAACTCTTCAAGCGGCTCGACATCGACCTGTGGCAGCAGACTC GCCACAACCCGGTGGAGATGCTCGGCATCCTCCAGCAAACCACCCTTGAGCGCCTTGTGGCGGACGAGGGCTTCATGGCC CAGCTCAAGCGGGTCGAGGAAAAATACCACGGCTACATGACCGGCAAGACGTGGTTCGATCGGACCTGGAACGGCGAGCG TCCCCTGCGGGTTGCCTATTTCTCCATGGAGTTCGGTCTCCACGAATCGGTTCCCACCTACTCCGGCGGCCTGGGGGTGC TGGCGGGGGATCATCTCAAGTCGGCCAGCGACCTGGGAATCCCCCTGGTGGGGATCGGCCTCCTCTACCGCCAGGGCTAC TTCCGCCAGTATCTCAATATCGAAGGGTGGCAGCAGGAGCTCTACCCCGAGAACGACTTCTACAACCTCCCCCTCAAACT CCAGCGGGACGAGGAAGGGCAACCGGTCACCATCGAGCTCGATCTGGCCGGCCGCAAGGTCCACGTCCAGATCTGGAAGG TGCAGGTGGGCCGGATTCCCCTCTATCTCCTGGACACCAACATGGAGGAGAACGACCCGCTGGACCGGGAGATCACGGCC CAGCTCTACGGCGGGGACCAGGACATGCGCATCCGCCAGGAGATTCTGCTGGGCATCGGCGGCATCCGGGCGTTGAACCG CCTCGGCATCGATCCCAATGTCTGCCACATGAACGAGGGGCACGCCGCCTTCCTGGCCCTGGAGCGGACCAAGCTCCTCA TGGAAAAGCACGGCCTGCGCTTCCCGGAGGCCATGGAAGCGGTCCGCGCCGGCACCATCTTTACGACCCATACTCCCGTG GACGCGGGTATCGACCATTTCCCCGCAGACCTGCTGGAACGCTATCTGGGACGCTATTACCGGTTCCTGGGGCTCTCCCG GGATGAATTCCTCTCCCTGGGACGCCAGCTGCCGAAAAATCCCCACGAATCGTTCTGCATGGCGGTGCTGGCCCTGCGGC TGGCCAATCACGCCAACGGCGTCAGCCAGCTTCACGGCGAGGTCTCGCGCAAGATGTGGAAAAACCTCTGGCCCGAGCTG CCTGACGAGCACATCCCCATCACCTCCGTCACCAACGGCGTCCACACCAAGACCTGGCTCTCGGTGGAGATGGCCGGGCT CCTCACCCGCTACCTGGGCAACCGCTGGCGGGAAGACCCCACCGACTCGCTCCTCTGGAAGCGGGTCGCCAACATTCCCG ACTCCGAACTCTGGCGGACTCACGAACGGTGCCGCGAACGGCTGGTGGTCTTTGCCCGGCGCCGGCTCAAGGATCACCTG CACCAGGTGGGCGCCACGGCCAAGGAGATCGCCCAGGCCGACGAGGTGCTGGACCCGGAAGCCCTGACCATCGGGTTCGC GCGGCGCTTCGCCACCTACAAGCGGGGGACCCTGCTCTTCCGGGACCTGGACCGGCTCGCCCGCATCCTCAACGACGCCG ACCGCCCCGTGCAGATCATCTTCTCGGGCAAGGCCCATCCCCACGACGTGGAGGGCAAGGAACTGATCCGCCGCATCTTC CAGCACTCCCTGGAAGCGCGATTCCACAACCGGATCGTGTTCATCGAGGACTATGACATGGCCGTGGCCCGGCACTTGGT CCAGGGGGTCGACGTCTGGCTCAACACCCCCCTGCGCCCCCTGGAGGCCAGCGGCACCAGCGGCATGAAGGTGGCGTTCA ACGGCGGCCTCAACATGAGCGTTCTGGACGGCTGGTGGCCCGAGGGATACCGGGGGAACAACGGCTGGGCTATCGGCAAG GGTGAGGTCTACGACGACATCGACTTCCAGAACGAGGTGGAGAGCCGCGCCATCTACGACCTGCTGGAAAAGGAGGTCAT CCCCCTCTTCTATGACCGGGGTCCCGACGGCATCCCCCGCGGCTGGCTCGCCTGCATGAAAGCGAGCCTCCAGACCCTGT GCCCGGTCTTCAGCACCGAGCGGATGGTCAAGGAGTATGCCGAGCGGATGTACCTCCCCTCCTTCGAGGAGTGGCGCACC CTGGCCGGCGACGGTCTGGCCCGGGCCGTGGATCTGGCCCGCTGGAAGGGTGAGATGCACCGGTCCTGGCACCAAGTGAA AGTGATTTCGGTGGAGGCCCCCGCCCCCGAGGAGGTGCCCCTGGGCGCGCCCATTCCGGTGACTGCCCGTATTGCCCTGG GCGACATCGTCCCGGACCGGGTGATTGTGGAGACCTACTGCGGCGTCCTCGACTCCCGGGGCAACATCGTGGGAGGCGAG TTGATTCCGCTGGACCACGCGGAAGAGGAAGGGGGAGGCTCCCACCGCTTCACGGGTGACATCGAAACCCGGTTCTGCGG CAGGCACGGTTTCATGATCCGGGTCATGCCCCGCCATCCCGAACTGGGACCGGTTTACGAACAGGGTCTGCTCGTCTGGG GCTGA
Upstream 100 bases:
>100_bases TCTGCGTAAGACAAAACCATCACGATACATGACGGGGGGTGCATCGACCGGCCGCGGATCAACGGCGCTCGCGGCCCCTT CCCCGGTCCCGGAGGTTTCA
Downstream 100 bases:
>100_bases GCGGCAACGGCTTCAGTTCTGCCCGGTTCCGCCGATAAGTAATCCATGATCGTGACTCAGGAAATAGCCCGGATCGCCCA GGCCCTCCTCAAGGATTCGA
Product: carbohydrate phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 854; Mature: 854
Protein sequence:
>854_residues MDFTKRIHRFTVVPSLSGELAILQTLAYNLWWTWEPDAVELFKRLDIDLWQQTRHNPVEMLGILQQTTLERLVADEGFMA QLKRVEEKYHGYMTGKTWFDRTWNGERPLRVAYFSMEFGLHESVPTYSGGLGVLAGDHLKSASDLGIPLVGIGLLYRQGY FRQYLNIEGWQQELYPENDFYNLPLKLQRDEEGQPVTIELDLAGRKVHVQIWKVQVGRIPLYLLDTNMEENDPLDREITA QLYGGDQDMRIRQEILLGIGGIRALNRLGIDPNVCHMNEGHAAFLALERTKLLMEKHGLRFPEAMEAVRAGTIFTTHTPV DAGIDHFPADLLERYLGRYYRFLGLSRDEFLSLGRQLPKNPHESFCMAVLALRLANHANGVSQLHGEVSRKMWKNLWPEL PDEHIPITSVTNGVHTKTWLSVEMAGLLTRYLGNRWREDPTDSLLWKRVANIPDSELWRTHERCRERLVVFARRRLKDHL HQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLDRLARILNDADRPVQIIFSGKAHPHDVEGKELIRRIF QHSLEARFHNRIVFIEDYDMAVARHLVQGVDVWLNTPLRPLEASGTSGMKVAFNGGLNMSVLDGWWPEGYRGNNGWAIGK GEVYDDIDFQNEVESRAIYDLLEKEVIPLFYDRGPDGIPRGWLACMKASLQTLCPVFSTERMVKEYAERMYLPSFEEWRT LAGDGLARAVDLARWKGEMHRSWHQVKVISVEAPAPEEVPLGAPIPVTARIALGDIVPDRVIVETYCGVLDSRGNIVGGE LIPLDHAEEEGGGSHRFTGDIETRFCGRHGFMIRVMPRHPELGPVYEQGLLVWG
Sequences:
>Translated_854_residues MDFTKRIHRFTVVPSLSGELAILQTLAYNLWWTWEPDAVELFKRLDIDLWQQTRHNPVEMLGILQQTTLERLVADEGFMA QLKRVEEKYHGYMTGKTWFDRTWNGERPLRVAYFSMEFGLHESVPTYSGGLGVLAGDHLKSASDLGIPLVGIGLLYRQGY FRQYLNIEGWQQELYPENDFYNLPLKLQRDEEGQPVTIELDLAGRKVHVQIWKVQVGRIPLYLLDTNMEENDPLDREITA QLYGGDQDMRIRQEILLGIGGIRALNRLGIDPNVCHMNEGHAAFLALERTKLLMEKHGLRFPEAMEAVRAGTIFTTHTPV DAGIDHFPADLLERYLGRYYRFLGLSRDEFLSLGRQLPKNPHESFCMAVLALRLANHANGVSQLHGEVSRKMWKNLWPEL PDEHIPITSVTNGVHTKTWLSVEMAGLLTRYLGNRWREDPTDSLLWKRVANIPDSELWRTHERCRERLVVFARRRLKDHL HQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLDRLARILNDADRPVQIIFSGKAHPHDVEGKELIRRIF QHSLEARFHNRIVFIEDYDMAVARHLVQGVDVWLNTPLRPLEASGTSGMKVAFNGGLNMSVLDGWWPEGYRGNNGWAIGK GEVYDDIDFQNEVESRAIYDLLEKEVIPLFYDRGPDGIPRGWLACMKASLQTLCPVFSTERMVKEYAERMYLPSFEEWRT LAGDGLARAVDLARWKGEMHRSWHQVKVISVEAPAPEEVPLGAPIPVTARIALGDIVPDRVIVETYCGVLDSRGNIVGGE LIPLDHAEEEGGGSHRFTGDIETRFCGRHGFMIRVMPRHPELGPVYEQGLLVWG >Mature_854_residues MDFTKRIHRFTVVPSLSGELAILQTLAYNLWWTWEPDAVELFKRLDIDLWQQTRHNPVEMLGILQQTTLERLVADEGFMA QLKRVEEKYHGYMTGKTWFDRTWNGERPLRVAYFSMEFGLHESVPTYSGGLGVLAGDHLKSASDLGIPLVGIGLLYRQGY FRQYLNIEGWQQELYPENDFYNLPLKLQRDEEGQPVTIELDLAGRKVHVQIWKVQVGRIPLYLLDTNMEENDPLDREITA QLYGGDQDMRIRQEILLGIGGIRALNRLGIDPNVCHMNEGHAAFLALERTKLLMEKHGLRFPEAMEAVRAGTIFTTHTPV DAGIDHFPADLLERYLGRYYRFLGLSRDEFLSLGRQLPKNPHESFCMAVLALRLANHANGVSQLHGEVSRKMWKNLWPEL PDEHIPITSVTNGVHTKTWLSVEMAGLLTRYLGNRWREDPTDSLLWKRVANIPDSELWRTHERCRERLVVFARRRLKDHL HQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLDRLARILNDADRPVQIIFSGKAHPHDVEGKELIRRIF QHSLEARFHNRIVFIEDYDMAVARHLVQGVDVWLNTPLRPLEASGTSGMKVAFNGGLNMSVLDGWWPEGYRGNNGWAIGK GEVYDDIDFQNEVESRAIYDLLEKEVIPLFYDRGPDGIPRGWLACMKASLQTLCPVFSTERMVKEYAERMYLPSFEEWRT LAGDGLARAVDLARWKGEMHRSWHQVKVISVEAPAPEEVPLGAPIPVTARIALGDIVPDRVIVETYCGVLDSRGNIVGGE LIPLDHAEEEGGGSHRFTGDIETRFCGRHGFMIRVMPRHPELGPVYEQGLLVWG
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=583, Percent_Identity=21.6123499142367, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI257900462, Length=456, Percent_Identity=21.2719298245614, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI2367228, Length=576, Percent_Identity=25.3472222222222, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI48994936, Length=578, Percent_Identity=23.1833910034602, Blast_Score=86, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 97650; Mature: 97650
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFTKRIHRFTVVPSLSGELAILQTLAYNLWWTWEPDAVELFKRLDIDLWQQTRHNPVEM CCHHHHHHHEEEECCCCCCHHHHHHHHHHEEEECCCHHHHHHHHHCHHHHHHCCCCHHHH LGILQQTTLERLVADEGFMAQLKRVEEKYHGYMTGKTWFDRTWNGERPLRVAYFSMEFGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCEEEEEEEEECCC HESVPTYSGGLGVLAGDHLKSASDLGIPLVGIGLLYRQGYFRQYLNIEGWQQELYPENDF CCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCE YNLPLKLQRDEEGQPVTIELDLAGRKVHVQIWKVQVGRIPLYLLDTNMEENDPLDREITA EECCEEEECCCCCCCEEEEEECCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCHHHHH QLYGGDQDMRIRQEILLGIGGIRALNRLGIDPNVCHMNEGHAAFLALERTKLLMEKHGLR HEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEHHHHHHHHHHCCCC FPEAMEAVRAGTIFTTHTPVDAGIDHFPADLLERYLGRYYRFLGLSRDEFLSLGRQLPKN CHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC PHESFCMAVLALRLANHANGVSQLHGEVSRKMWKNLWPELPDEHIPITSVTNGVHTKTWL CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH SVEMAGLLTRYLGNRWREDPTDSLLWKRVANIPDSELWRTHERCRERLVVFARRRLKDHL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLDRLARILNDADRPVQII HHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEE FSGKAHPHDVEGKELIRRIFQHSLEARFHNRIVFIEDYDMAVARHLVQGVDVWLNTPLRP EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCC LEASGTSGMKVAFNGGLNMSVLDGWWPEGYRGNNGWAIGKGEVYDDIDFQNEVESRAIYD CCCCCCCCEEEEEECCCCEEEECCCCCCCEECCCCEEECCCCCCCCCCCHHHHHHHHHHH LLEKEVIPLFYDRGPDGIPRGWLACMKASLQTLCPVFSTERMVKEYAERMYLPSFEEWRT HHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LAGDGLARAVDLARWKGEMHRSWHQVKVISVEAPAPEEVPLGAPIPVTARIALGDIVPDR HHCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCH VIVETYCGVLDSRGNIVGGELIPLDHAEEEGGGSHRFTGDIETRFCGRHGFMIRVMPRHP HHHHHHHHHHCCCCCEECCEEEECCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEECCCC ELGPVYEQGLLVWG CCCCHHHCCEEECC >Mature Secondary Structure MDFTKRIHRFTVVPSLSGELAILQTLAYNLWWTWEPDAVELFKRLDIDLWQQTRHNPVEM CCHHHHHHHEEEECCCCCCHHHHHHHHHHEEEECCCHHHHHHHHHCHHHHHHCCCCHHHH LGILQQTTLERLVADEGFMAQLKRVEEKYHGYMTGKTWFDRTWNGERPLRVAYFSMEFGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCEEEEEEEEECCC HESVPTYSGGLGVLAGDHLKSASDLGIPLVGIGLLYRQGYFRQYLNIEGWQQELYPENDF CCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCE YNLPLKLQRDEEGQPVTIELDLAGRKVHVQIWKVQVGRIPLYLLDTNMEENDPLDREITA EECCEEEECCCCCCCEEEEEECCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCHHHHH QLYGGDQDMRIRQEILLGIGGIRALNRLGIDPNVCHMNEGHAAFLALERTKLLMEKHGLR HEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEHHHHHHHHHHCCCC FPEAMEAVRAGTIFTTHTPVDAGIDHFPADLLERYLGRYYRFLGLSRDEFLSLGRQLPKN CHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC PHESFCMAVLALRLANHANGVSQLHGEVSRKMWKNLWPELPDEHIPITSVTNGVHTKTWL CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH SVEMAGLLTRYLGNRWREDPTDSLLWKRVANIPDSELWRTHERCRERLVVFARRRLKDHL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLDRLARILNDADRPVQII HHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEE FSGKAHPHDVEGKELIRRIFQHSLEARFHNRIVFIEDYDMAVARHLVQGVDVWLNTPLRP EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCC LEASGTSGMKVAFNGGLNMSVLDGWWPEGYRGNNGWAIGKGEVYDDIDFQNEVESRAIYD CCCCCCCCEEEEEECCCCEEEECCCCCCCEECCCCEEECCCCCCCCCCCHHHHHHHHHHH LLEKEVIPLFYDRGPDGIPRGWLACMKASLQTLCPVFSTERMVKEYAERMYLPSFEEWRT HHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LAGDGLARAVDLARWKGEMHRSWHQVKVISVEAPAPEEVPLGAPIPVTARIALGDIVPDR HHCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCH VIVETYCGVLDSRGNIVGGELIPLDHAEEEGGGSHRFTGDIETRFCGRHGFMIRVMPRHP HHHHHHHHHHCCCCCEECCEEEECCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEECCCC ELGPVYEQGLLVWG CCCCHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]