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The map label for this gene is 39995375

Identifier: 39995375

GI number: 39995375

Start: 272096

End: 272998

Strand: Reverse

Name: 39995375

Synonym: GSU0265

Alternate gene names: NA

Gene position: 272998-272096 (Counterclockwise)

Preceding gene: 39995380

Following gene: 39995374

Centisome position: 7.16

GC content: 64.34

Gene sequence:

>903_bases
ATGCACAACTTTCTCATAATCGGAGCCTTCATTTCGCTGGGGATTCTCCTGCGGCGGTTCAAGGCGCTGCCGGAACATAC
CCCCTTCGTGCTCAACAAGATCGCCATCAACGTCTGCCTGCCGGCGCTCATCCTCCTCAACGCCCCCAAAATCGCCTTCA
CTCGCGACGCGGTGACGGCGGCGATCATCCCCTGGGCGCTGCTGGCGCTTTCCGTGGGACTGGTGCTGCTCGGGGCGAAG
ATCTGGCAATGGCCGCGGCCCGTCGTGGGGGTGCTGCTCCTGATCGTTCCGTTGGGAAACACCTCCTTTCTGGGGGTGCC
GATCATCCGGACCTTCTTCGGCGCGGACGGCCTGCCGCACCTGATCGTCTACGACCAGATAGGGACCATGATGATCTTCG
CCACCTACGGCTCCTTCATCCTTTCCCTCTACGGCCAGGATGGAACTCTGTCCGTTTCCGCCGTGGTCCGCAAGATGCTC
CTCTTCCCGCCATCCCTGGCCTTGGCCGCCGGGCTCGCGCTCAAGTCGTGGTCCTATCCGGACGGACTGTCCCTTGCGCT
CCACTACCTGGCACTGCCCTTGGTGCCGGTGGTGATGACGGCCATCGGCCTGCAGCTCCGGCTGAGGTTGCCCCCCCATC
TCGCGGCGCCGGTCGGCATCGGACTCGGTATCAAGATGCTCGCCGCTCCGCTGGCAGTCCTGGTGGCATGCCGCCTGGTC
GACATGAACGGCCTGGCGGTAGGTGTTTCGGTCGTGGAGGCAGGCATGCCGCCGATGGTAACCGCCGGAGCCCTGGCAGT
GGTTGCAGGAATGGAGGCGGAGCTCGCCATCGCACTGGTCGGGATCGGCATCCTCTGCTCCTTCGGGTCGCTGCCGGCAC
TCTTCTGGCTGGTAAGCCTGTAA

Upstream 100 bases:

>100_bases
GGCCGGCGCTAATGGGTCGACTCCCAGGTCGCACATTGGACCGGGGCGTATAAATGACGATGGGCACGGGCGATCCGAAT
AGCCTGTGCCGGGAGAAACC

Downstream 100 bases:

>100_bases
GAAACGGGAGCAATAGTGCGGCATGAACATCATTGGCGGAACGGAGAACCCTGCCCTATGGAAATAACCTCCACGGCCCC
GGCGTTCCAGCCGGCCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MHNFLIIGAFISLGILLRRFKALPEHTPFVLNKIAINVCLPALILLNAPKIAFTRDAVTAAIIPWALLALSVGLVLLGAK
IWQWPRPVVGVLLLIVPLGNTSFLGVPIIRTFFGADGLPHLIVYDQIGTMMIFATYGSFILSLYGQDGTLSVSAVVRKML
LFPPSLALAAGLALKSWSYPDGLSLALHYLALPLVPVVMTAIGLQLRLRLPPHLAAPVGIGLGIKMLAAPLAVLVACRLV
DMNGLAVGVSVVEAGMPPMVTAGALAVVAGMEAELAIALVGIGILCSFGSLPALFWLVSL

Sequences:

>Translated_300_residues
MHNFLIIGAFISLGILLRRFKALPEHTPFVLNKIAINVCLPALILLNAPKIAFTRDAVTAAIIPWALLALSVGLVLLGAK
IWQWPRPVVGVLLLIVPLGNTSFLGVPIIRTFFGADGLPHLIVYDQIGTMMIFATYGSFILSLYGQDGTLSVSAVVRKML
LFPPSLALAAGLALKSWSYPDGLSLALHYLALPLVPVVMTAIGLQLRLRLPPHLAAPVGIGLGIKMLAAPLAVLVACRLV
DMNGLAVGVSVVEAGMPPMVTAGALAVVAGMEAELAIALVGIGILCSFGSLPALFWLVSL
>Mature_300_residues
MHNFLIIGAFISLGILLRRFKALPEHTPFVLNKIAINVCLPALILLNAPKIAFTRDAVTAAIIPWALLALSVGLVLLGAK
IWQWPRPVVGVLLLIVPLGNTSFLGVPIIRTFFGADGLPHLIVYDQIGTMMIFATYGSFILSLYGQDGTLSVSAVVRKML
LFPPSLALAAGLALKSWSYPDGLSLALHYLALPLVPVVMTAIGLQLRLRLPPHLAAPVGIGLGIKMLAAPLAVLVACRLV
DMNGLAVGVSVVEAGMPPMVTAGALAVVAGMEAELAIALVGIGILCSFGSLPALFWLVSL

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 31528; Mature: 31528

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNFLIIGAFISLGILLRRFKALPEHTPFVLNKIAINVCLPALILLNAPKIAFTRDAVTA
CCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH
AIIPWALLALSVGLVLLGAKIWQWPRPVVGVLLLIVPLGNTSFLGVPIIRTFFGADGLPH
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
LIVYDQIGTMMIFATYGSFILSLYGQDGTLSVSAVVRKMLLFPPSLALAAGLALKSWSYP
EEEEECHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
DGLSLALHYLALPLVPVVMTAIGLQLRLRLPPHLAAPVGIGLGIKMLAAPLAVLVACRLV
CHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DMNGLAVGVSVVEAGMPPMVTAGALAVVAGMEAELAIALVGIGILCSFGSLPALFWLVSL
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MHNFLIIGAFISLGILLRRFKALPEHTPFVLNKIAINVCLPALILLNAPKIAFTRDAVTA
CCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH
AIIPWALLALSVGLVLLGAKIWQWPRPVVGVLLLIVPLGNTSFLGVPIIRTFFGADGLPH
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
LIVYDQIGTMMIFATYGSFILSLYGQDGTLSVSAVVRKMLLFPPSLALAAGLALKSWSYP
EEEEECHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
DGLSLALHYLALPLVPVVMTAIGLQLRLRLPPHLAAPVGIGLGIKMLAAPLAVLVACRLV
CHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DMNGLAVGVSVVEAGMPPMVTAGALAVVAGMEAELAIALVGIGILCSFGSLPALFWLVSL
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]