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The map label for this gene is ybfF [C]

Identifier: 39995355

GI number: 39995355

Start: 252474

End: 253136

Strand: Reverse

Name: ybfF [C]

Synonym: GSU0245

Alternate gene names: 39995355

Gene position: 253136-252474 (Counterclockwise)

Preceding gene: 39995356

Following gene: 39995354

Centisome position: 6.64

GC content: 68.02

Gene sequence:

>663_bases
TTGGGATACTGTATAATCATACCAGCCTACAACGCGGCCCGGACCCTGCCGGCCGTGGTCCGGGAAGTCCTCGGCCTGGG
GATGCCATGCCTCGTGGTGGACGACGGCTCCACCGACGGGACCTCCGCCACGGTGGAGGGGCTGGGGGTACACCTGCTGC
GCCACGACGGCAACCGCGGCAAGGGAGCGGCCCTGCGGACCGGCTTCGAGTGGGCGCTCGCGCACGGATACTCCGGCGTG
GTGACCCTGGACGCCGACGGCCAGCACGACCCCACGGCCATCCCGCTCCTGGCGGCTACGGCCCGGGAGCGCAACGTCGA
CATCCTCATCGCCTCCCGCGATACCCAGTTCCGGGAGATGGCGGGGCTTCGCTCCGTCTGGAACCGCTTCGGCGTCTGGT
GCATGAGGAAGCGGACCGGCTTCACCATCACCGACAGCCAGTCCGGGTTCCGCTGGTACTCCGCCCGGCTCCTGAAAGGG
GTCTCCCTGGAGGCGAGCGGCTACCACCTGGAGATGGAAATCCTCATGAAGGCATGGCGGGGTGGATTCGCCATCGATTC
GCTCCCCGTGGCCGCCCGGGTGGCGGACGGACGTGCCACGAGCCATTTCCGGCCGGTGCGGGATACCTGGAATATCTGCA
TGACGTTCCTGCGCCACATGTGA

Upstream 100 bases:

>100_bases
GCTCCTTCGTGGCCTACGGACCGCGTAGCGATGCGGCACCGCGACTCGACGCCCTGCTGGAACGATTCTCATTCACTACA
CTCGATCAGTTGGTTGACCG

Downstream 100 bases:

>100_bases
GGCTGCGCAGGGGCCCTTTTGCCGGGAATCACAACGAGGTCACAGATTGATGCTCCAGAGCCTGAAAAACTATACAACCG
AAAAGATCGTCTCCCTCCTT

Product: glycosyl transferase group 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MGYCIIIPAYNAARTLPAVVREVLGLGMPCLVVDDGSTDGTSATVEGLGVHLLRHDGNRGKGAALRTGFEWALAHGYSGV
VTLDADGQHDPTAIPLLAATARERNVDILIASRDTQFREMAGLRSVWNRFGVWCMRKRTGFTITDSQSGFRWYSARLLKG
VSLEASGYHLEMEILMKAWRGGFAIDSLPVAARVADGRATSHFRPVRDTWNICMTFLRHM

Sequences:

>Translated_220_residues
MGYCIIIPAYNAARTLPAVVREVLGLGMPCLVVDDGSTDGTSATVEGLGVHLLRHDGNRGKGAALRTGFEWALAHGYSGV
VTLDADGQHDPTAIPLLAATARERNVDILIASRDTQFREMAGLRSVWNRFGVWCMRKRTGFTITDSQSGFRWYSARLLKG
VSLEASGYHLEMEILMKAWRGGFAIDSLPVAARVADGRATSHFRPVRDTWNICMTFLRHM
>Mature_219_residues
GYCIIIPAYNAARTLPAVVREVLGLGMPCLVVDDGSTDGTSATVEGLGVHLLRHDGNRGKGAALRTGFEWALAHGYSGVV
TLDADGQHDPTAIPLLAATARERNVDILIASRDTQFREMAGLRSVWNRFGVWCMRKRTGFTITDSQSGFRWYSARLLKGV
SLEASGYHLEMEILMKAWRGGFAIDSLPVAARVADGRATSHFRPVRDTWNICMTFLRHM

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 24181; Mature: 24050

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYCIIIPAYNAARTLPAVVREVLGLGMPCLVVDDGSTDGTSATVEGLGVHLLRHDGNRG
CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEHHHCEEEEEEECCCCC
KGAALRTGFEWALAHGYSGVVTLDADGQHDPTAIPLLAATARERNVDILIASRDTQFREM
CCCEEECCHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHH
AGLRSVWNRFGVWCMRKRTGFTITDSQSGFRWYSARLLKGVSLEASGYHLEMEILMKAWR
HHHHHHHHHHCEEEEECCCCEEEECCCCCCHHHHHHHHHCCEEECCCCEEHHHHHHHHHC
GGFAIDSLPVAARVADGRATSHFRPVRDTWNICMTFLRHM
CCCEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GYCIIIPAYNAARTLPAVVREVLGLGMPCLVVDDGSTDGTSATVEGLGVHLLRHDGNRG
CEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEHHHCEEEEEEECCCCC
KGAALRTGFEWALAHGYSGVVTLDADGQHDPTAIPLLAATARERNVDILIASRDTQFREM
CCCEEECCHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHH
AGLRSVWNRFGVWCMRKRTGFTITDSQSGFRWYSARLLKGVSLEASGYHLEMEILMKAWR
HHHHHHHHHHCEEEEECCCCEEEECCCCCCHHHHHHHHHCCEEECCCCEEHHHHHHHHHC
GGFAIDSLPVAARVADGRATSHFRPVRDTWNICMTFLRHM
CCCEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]