| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995341
Identifier: 39995341
GI number: 39995341
Start: 239002
End: 240777
Strand: Reverse
Name: 39995341
Synonym: GSU0231
Alternate gene names: NA
Gene position: 240777-239002 (Counterclockwise)
Preceding gene: 39995342
Following gene: 39995340
Centisome position: 6.31
GC content: 63.57
Gene sequence:
>1776_bases ATGTCTTTCACCGGTGACCTGGAACACCTGTCGATCGTCGACGTCATCCAACTGCTGCACGCCACCCGCAAGTCAGGCAC CCTCACCGTGCGGGGACGCAAGGGAGAGTCCCAGCTCGTCTTCAACGACGGCTACATCATCAGCGCCAATCACTTCGACA ACAGCGTCCGGATCGGCAACATCCTCGTAGAGGCCGGCGTCATCAGCAAGGAGGTCCTGGAGCAGGCCCTGCAGGAGCAG GAGGAGGCGGGAGCGGGACGGAAACCCCTGGTGGCAACACTTCTCGAACGGGGCAGCGTCCGCAAGGAGGACGCCTACCG GGGGCTTGAGGCCCTCATCGAGCTGACGGTGGTGGAAATTCTCACCTGGAGGCGGGGCACCTTTGATCTGGACGTGAACC GGGTCAGCGTCTCCGACGAGTACCGCTATTTCCCGGAAAAGCTCCATGAGGAAATCACGCTCCACACGGAAAATGTCCTC ATGGACGCCCTCCGCATCTACGACGAGAAAAAGCGCGATGGTCTGCTGGTGGAGGAGGAGTTTGCGATCGAGGCCCCTAT CCCGGACCTCTCCGGCGATGAAGCCGCCGATTTCAACATCTCGGCCGACGATCTGGGACTCGGGGACCTGGATCAGATCG AACGGAAAATTCCCCAGGTCTTTCTGGGGCTGGAGGATCGCAGCCCCTCCCTTCAGCGTAAGATTCAAGAGCTGGGCGCA GACCTTTCCGACAAAGAACAGGAGGAGCTCTTCGCCTTTCTGGGCCGGCTCGGGAACACCGCACCAGCCGCCGGTGCGCC CACTCTTTCCGCCATCCTCTTCAGCCCGGACGACCTTTTTTCCTACTGCGTAACCACCGTCTGCCGTCAGGCGGGGATTT CCGTTTTCACCACCAACGACGAGCAGGACCTGGCCCCTCTGGCGCAACAGTTCGCCTCCCGTGGCGGGCAGACGACCCTG ATCCTTGACTCGCCGGCATCGCCCGGCTTTACCCTGCCCGCAGAAGATGCGGCGCGGCTCCTGCGACGAGTCAGGGAGCA CCACCCCTCCCTCGCCCTCATCCAGCTCGCTTCGCCCCTTGAGCCGGCCTTTGCCCTCCAGGCCCTGAAAGACGGAGCCG TGGCCGTCTTCCCCCGCCCCGTGCGCGAGGTGAGCGGCGACACCTTCCTGGAGGACACCCTCCGGCTTCTGGACGCCCTG CCCCTCTATCTGAGGCGGCGGGGCTCAGACGGCGGCGAAGCGGCCATGGCCCAACTCGGCAAAACGTTAATGGAGTTGCG GGCACTTCGCGAGCCTCCGGAAATCGCCCTGACCCTCCTGAGTACGGTGGCAGGCACCTTCGAGCGGGCACTCACTCTCA TCGTGCGCGAAGAGGAACTTATCGCCGAGCGGAGTATCGGCATTCGGAGCCCCCGTGGCGCCTGCGTCTCACCCTCTTTC GGGACGAGGATCCCCCTGGACCGCCCGTCGGTGCTCCGGGACGCGATTGAAAAAAGAGCTGCATTTTATGGCGAAACTGA CGATGAGATACTGAAGGGGCATCTTTTTCCCATCATCGGCGCTCCGCTCCACCCCACGGTCATCCTGCTCCCGCTGGTCT GCGGCGGCAAGGTCATCGCTCTCATCTACGGGGATTTCGGCCACAAGGGGGCAGCGCCCGTGCGCACCGAGCTGCTTGAG CTCGTGACGGGCGAGGCGGGGTTGGTTCTGGAAACGGCGCTCTATCGCAGGAAACGGGAGCGGAAGGCTCCCGAGGGGAC GGCCTGTGACCGCTGA
Upstream 100 bases:
>100_bases GAGTTTAATTGAACCTGGGTCCAGCGGGGAAAGTCGCCCCCCTGACGGTCCAGGGCTGGACCGGGCGCATCCTGACGCCC CCTGCAAGGAGAACCGCCTC
Downstream 100 bases:
>100_bases ACGGTCTTTCCGGCCGCATTTTTTAGATAGCAGTGAGGTACCGCCATGGATATGAACCTTCTGTCCCAGATTCTGGGCAT TGCCTTTGAAAAGCGGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MSFTGDLEHLSIVDVIQLLHATRKSGTLTVRGRKGESQLVFNDGYIISANHFDNSVRIGNILVEAGVISKEVLEQALQEQ EEAGAGRKPLVATLLERGSVRKEDAYRGLEALIELTVVEILTWRRGTFDLDVNRVSVSDEYRYFPEKLHEEITLHTENVL MDALRIYDEKKRDGLLVEEEFAIEAPIPDLSGDEAADFNISADDLGLGDLDQIERKIPQVFLGLEDRSPSLQRKIQELGA DLSDKEQEELFAFLGRLGNTAPAAGAPTLSAILFSPDDLFSYCVTTVCRQAGISVFTTNDEQDLAPLAQQFASRGGQTTL ILDSPASPGFTLPAEDAARLLRRVREHHPSLALIQLASPLEPAFALQALKDGAVAVFPRPVREVSGDTFLEDTLRLLDAL PLYLRRRGSDGGEAAMAQLGKTLMELRALREPPEIALTLLSTVAGTFERALTLIVREEELIAERSIGIRSPRGACVSPSF GTRIPLDRPSVLRDAIEKRAAFYGETDDEILKGHLFPIIGAPLHPTVILLPLVCGGKVIALIYGDFGHKGAAPVRTELLE LVTGEAGLVLETALYRRKRERKAPEGTACDR
Sequences:
>Translated_591_residues MSFTGDLEHLSIVDVIQLLHATRKSGTLTVRGRKGESQLVFNDGYIISANHFDNSVRIGNILVEAGVISKEVLEQALQEQ EEAGAGRKPLVATLLERGSVRKEDAYRGLEALIELTVVEILTWRRGTFDLDVNRVSVSDEYRYFPEKLHEEITLHTENVL MDALRIYDEKKRDGLLVEEEFAIEAPIPDLSGDEAADFNISADDLGLGDLDQIERKIPQVFLGLEDRSPSLQRKIQELGA DLSDKEQEELFAFLGRLGNTAPAAGAPTLSAILFSPDDLFSYCVTTVCRQAGISVFTTNDEQDLAPLAQQFASRGGQTTL ILDSPASPGFTLPAEDAARLLRRVREHHPSLALIQLASPLEPAFALQALKDGAVAVFPRPVREVSGDTFLEDTLRLLDAL PLYLRRRGSDGGEAAMAQLGKTLMELRALREPPEIALTLLSTVAGTFERALTLIVREEELIAERSIGIRSPRGACVSPSF GTRIPLDRPSVLRDAIEKRAAFYGETDDEILKGHLFPIIGAPLHPTVILLPLVCGGKVIALIYGDFGHKGAAPVRTELLE LVTGEAGLVLETALYRRKRERKAPEGTACDR >Mature_590_residues SFTGDLEHLSIVDVIQLLHATRKSGTLTVRGRKGESQLVFNDGYIISANHFDNSVRIGNILVEAGVISKEVLEQALQEQE EAGAGRKPLVATLLERGSVRKEDAYRGLEALIELTVVEILTWRRGTFDLDVNRVSVSDEYRYFPEKLHEEITLHTENVLM DALRIYDEKKRDGLLVEEEFAIEAPIPDLSGDEAADFNISADDLGLGDLDQIERKIPQVFLGLEDRSPSLQRKIQELGAD LSDKEQEELFAFLGRLGNTAPAAGAPTLSAILFSPDDLFSYCVTTVCRQAGISVFTTNDEQDLAPLAQQFASRGGQTTLI LDSPASPGFTLPAEDAARLLRRVREHHPSLALIQLASPLEPAFALQALKDGAVAVFPRPVREVSGDTFLEDTLRLLDALP LYLRRRGSDGGEAAMAQLGKTLMELRALREPPEIALTLLSTVAGTFERALTLIVREEELIAERSIGIRSPRGACVSPSFG TRIPLDRPSVLRDAIEKRAAFYGETDDEILKGHLFPIIGAPLHPTVILLPLVCGGKVIALIYGDFGHKGAAPVRTELLEL VTGEAGLVLETALYRRKRERKAPEGTACDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64778; Mature: 64647
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTGDLEHLSIVDVIQLLHATRKSGTLTVRGRKGESQLVFNDGYIISANHFDNSVRIGN CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCEEEEECCCCCCEEECC ILVEAGVISKEVLEQALQEQEEAGAGRKPLVATLLERGSVRKEDAYRGLEALIELTVVEI EEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LTWRRGTFDLDVNRVSVSDEYRYFPEKLHEEITLHTENVLMDALRIYDEKKRDGLLVEEE HHHCCCCEEEECEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC FAIEAPIPDLSGDEAADFNISADDLGLGDLDQIERKIPQVFLGLEDRSPSLQRKIQELGA CEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCC DLSDKEQEELFAFLGRLGNTAPAAGAPTLSAILFSPDDLFSYCVTTVCRQAGISVFTTND CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCC EQDLAPLAQQFASRGGQTTLILDSPASPGFTLPAEDAARLLRRVREHHPSLALIQLASPL HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC EPAFALQALKDGAVAVFPRPVREVSGDTFLEDTLRLLDALPLYLRRRGSDGGEAAMAQLG CHHHHHHHHHCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH KTLMELRALREPPEIALTLLSTVAGTFERALTLIVREEELIAERSIGIRSPRGACVSPSF HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GTRIPLDRPSVLRDAIEKRAAFYGETDDEILKGHLFPIIGAPLHPTVILLPLVCGGKVIA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCCCCCHHHHHHHHCCCEEEE LIYGDFGHKGAAPVRTELLELVTGEAGLVLETALYRRKRERKAPEGTACDR EEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SFTGDLEHLSIVDVIQLLHATRKSGTLTVRGRKGESQLVFNDGYIISANHFDNSVRIGN CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCEEEEECCCCCCEEECC ILVEAGVISKEVLEQALQEQEEAGAGRKPLVATLLERGSVRKEDAYRGLEALIELTVVEI EEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LTWRRGTFDLDVNRVSVSDEYRYFPEKLHEEITLHTENVLMDALRIYDEKKRDGLLVEEE HHHCCCCEEEECEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC FAIEAPIPDLSGDEAADFNISADDLGLGDLDQIERKIPQVFLGLEDRSPSLQRKIQELGA CEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCC DLSDKEQEELFAFLGRLGNTAPAAGAPTLSAILFSPDDLFSYCVTTVCRQAGISVFTTND CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCC EQDLAPLAQQFASRGGQTTLILDSPASPGFTLPAEDAARLLRRVREHHPSLALIQLASPL HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC EPAFALQALKDGAVAVFPRPVREVSGDTFLEDTLRLLDALPLYLRRRGSDGGEAAMAQLG CHHHHHHHHHCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH KTLMELRALREPPEIALTLLSTVAGTFERALTLIVREEELIAERSIGIRSPRGACVSPSF HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GTRIPLDRPSVLRDAIEKRAAFYGETDDEILKGHLFPIIGAPLHPTVILLPLVCGGKVIA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCCCCCHHHHHHHHCCCEEEE LIYGDFGHKGAAPVRTELLELVTGEAGLVLETALYRRKRERKAPEGTACDR EEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA