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The map label for this gene is yccM [H]

Identifier: 39995237

GI number: 39995237

Start: 139913

End: 140890

Strand: Reverse

Name: yccM [H]

Synonym: GSU0126

Alternate gene names: 39995237

Gene position: 140890-139913 (Counterclockwise)

Preceding gene: 39995238

Following gene: 39995236

Centisome position: 3.69

GC content: 62.17

Gene sequence:

>978_bases
ATGAGCAACCGCTACATGCAACCCCTCCGCATCGCCATCCAGTTGGGATTTCTTGTTTTCATGCTCTACCTGGGGGTGCG
GTTGTATCTCTTCGTACAGCACTTCCGCACAGGGGGCGCGACCCCCTTTGTGCCCCGCCCCGACGGCGTGGACGGATTTC
TGCCCATATCGGGCCTGCTGGGGCTCAAGGACTGGTTTGCCGGCGGCACAATAAATCCGGTGCATCCCGCGGCCGTGGTG
GTCTTTGTGACGGTAGTAGCGGTGTCGCTCTTGCTCAAGCGCTCCTTCTGCTCCTGGATCTGCCCTGTGGGGACCCTGTC
GGAACTGCTCTGGAAGCGTGGTTTCACCCTCTTCCGCCGCAATCTGAGGCCTCCCCGCTGGCTCGATGTGGCCCTGCGCG
GCCTGAAGTACCTGCTTTTGGCCTTCTTTCTCTATTCAATTCTGTGGGTCATGCCACCTCCGGCGGTAAAGGCCTTCATT
TTCATGGATGATCACCTGATTGCCGATGTGAAACTGCTGAACTTCTTCCTGCACCTGTCAGGCATCCCCTTGGTGGTCAT
CCTGGTGCTGCTGGTCCTGTCGCTGCCTGTGCGCAACCCCTTCTGCCGCTACCTCTGCCCCTACGGAGCGCTGCTCGGCC
TCGTCTCCCTCCTCTCGCCGGTGAAGGTGACGCGGGAGCGGACCGTCTGCGTCTCCTGCGGAGTCTGCACCCAGGTCTGT
CCGGCCTACATCCCAGTCATGGCCAAGGAGCGGGTCCATTCGGAAGAGTGCATCGGCTGCTGGCGCTGCGTCAGCCACTG
CCGCGCCCAGGGAGCCCTGTCCATGAAGCTCACCGGCAGGCGGGTGGCGGTCAGCGGCACCGTCTTCGCCGTGCTGGTGG
TGGTGATCTTCGTTGGAGGATCCGTTGCGGGGCGCGCCACCGGACACTGGAAATCTCAGATTCCCTATGCCGAGTACATG
CGGCTTCTGGGACCGTGA

Upstream 100 bases:

>100_bases
GCCAAAGGCGACAAGCGGTTCCATGGCAGCCTCCTTGAGTATCTGATACGGAAAGGGTACCAGGACATCGCGACACAATA
TGTCTCAACGGGAGATCAAC

Downstream 100 bases:

>100_bases
CCCCCTGAAGAAAGGAGTCTAACCATGTCACTTACCACGGAACTCGTGGACTGGACCCATGAACAGAAGTGCCGCAAGGC
AGTGGCCGCACTTGAGAAGA

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSNRYMQPLRIAIQLGFLVFMLYLGVRLYLFVQHFRTGGATPFVPRPDGVDGFLPISGLLGLKDWFAGGTINPVHPAAVV
VFVTVVAVSLLLKRSFCSWICPVGTLSELLWKRGFTLFRRNLRPPRWLDVALRGLKYLLLAFFLYSILWVMPPPAVKAFI
FMDDHLIADVKLLNFFLHLSGIPLVVILVLLVLSLPVRNPFCRYLCPYGALLGLVSLLSPVKVTRERTVCVSCGVCTQVC
PAYIPVMAKERVHSEECIGCWRCVSHCRAQGALSMKLTGRRVAVSGTVFAVLVVVIFVGGSVAGRATGHWKSQIPYAEYM
RLLGP

Sequences:

>Translated_325_residues
MSNRYMQPLRIAIQLGFLVFMLYLGVRLYLFVQHFRTGGATPFVPRPDGVDGFLPISGLLGLKDWFAGGTINPVHPAAVV
VFVTVVAVSLLLKRSFCSWICPVGTLSELLWKRGFTLFRRNLRPPRWLDVALRGLKYLLLAFFLYSILWVMPPPAVKAFI
FMDDHLIADVKLLNFFLHLSGIPLVVILVLLVLSLPVRNPFCRYLCPYGALLGLVSLLSPVKVTRERTVCVSCGVCTQVC
PAYIPVMAKERVHSEECIGCWRCVSHCRAQGALSMKLTGRRVAVSGTVFAVLVVVIFVGGSVAGRATGHWKSQIPYAEYM
RLLGP
>Mature_324_residues
SNRYMQPLRIAIQLGFLVFMLYLGVRLYLFVQHFRTGGATPFVPRPDGVDGFLPISGLLGLKDWFAGGTINPVHPAAVVV
FVTVVAVSLLLKRSFCSWICPVGTLSELLWKRGFTLFRRNLRPPRWLDVALRGLKYLLLAFFLYSILWVMPPPAVKAFIF
MDDHLIADVKLLNFFLHLSGIPLVVILVLLVLSLPVRNPFCRYLCPYGALLGLVSLLSPVKVTRERTVCVSCGVCTQVCP
AYIPVMAKERVHSEECIGCWRCVSHCRAQGALSMKLTGRRVAVSGTVFAVLVVVIFVGGSVAGRATGHWKSQIPYAEYMR
LLGP

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=325, Percent_Identity=42.1538461538462, Blast_Score=258, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36124; Mature: 35993

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRYMQPLRIAIQLGFLVFMLYLGVRLYLFVQHFRTGGATPFVPRPDGVDGFLPISGLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
GLKDWFAGGTINPVHPAAVVVFVTVVAVSLLLKRSFCSWICPVGTLSELLWKRGFTLFRR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHH
NLRPPRWLDVALRGLKYLLLAFFLYSILWVMPPPAVKAFIFMDDHLIADVKLLNFFLHLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHHHHHHHHHHHHHC
GIPLVVILVLLVLSLPVRNPFCRYLCPYGALLGLVSLLSPVKVTRERTVCVSCGVCTQVC
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCHHHHHH
PAYIPVMAKERVHSEECIGCWRCVSHCRAQGALSMKLTGRRVAVSGTVFAVLVVVIFVGG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHHHHHCC
SVAGRATGHWKSQIPYAEYMRLLGP
CCCCCCCCCHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
SNRYMQPLRIAIQLGFLVFMLYLGVRLYLFVQHFRTGGATPFVPRPDGVDGFLPISGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
GLKDWFAGGTINPVHPAAVVVFVTVVAVSLLLKRSFCSWICPVGTLSELLWKRGFTLFRR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHH
NLRPPRWLDVALRGLKYLLLAFFLYSILWVMPPPAVKAFIFMDDHLIADVKLLNFFLHLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHHHHHHHHHHHHHC
GIPLVVILVLLVLSLPVRNPFCRYLCPYGALLGLVSLLSPVKVTRERTVCVSCGVCTQVC
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCHHHHHH
PAYIPVMAKERVHSEECIGCWRCVSHCRAQGALSMKLTGRRVAVSGTVFAVLVVVIFVGG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHHHHHCC
SVAGRATGHWKSQIPYAEYMRLLGP
CCCCCCCCCHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]