Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is ybjQ [C]
Identifier: 308513329
GI number: 308513329
Start: 3071064
End: 3071429
Strand: Direct
Name: ybjQ [C]
Synonym: NA
Alternate gene names: 308513329
Gene position: 3071064-3071429 (Clockwise)
Preceding gene: 39997881
Following gene: 39997885
Centisome position: 80.52
GC content: 62.57
Gene sequence:
>366_bases ATGCTTTCCATGATATCCACACCCCGGAAGGAGACCAAGAACGCCATGATCATCACCACAACTCCCACCATCGAAGGAAA GCGGATCGTCCGCTACTGCGGCGTTGTTGCCGGCGAGGCTATCCTCGGCGCAAACCTGTTCAAGGATCTGTTTGCCAATA TCCGCGACATGGTGGGCGGCCGGTCGGCCACCTACGAGCGGGAATTGCAGCGGGCGCGCGACATCGCCCTGCGGGAACTG GAGGAGCGGGCCGAAGAACTGGGCGCCACGGCCGTGGTGGGGGTCGATCTTGACTACGAGGTCATGGGACAGGGGAACGG GATGCTGATGGTCTCGGCCAGCGGTACGGCGGTGGTGGTCGAGTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
NA
Sequences:
>Translated_121_residues MLSMISTPRKETKNAMIITTTPTIEGKRIVRYCGVVAGEAILGANLFKDLFANIRDMVGGRSATYERELQRARDIALREL EERAEELGATAVVGVDLDYEVMGQGNGMLMVSASGTAVVVE >Mature_121_residues MLSMISTPRKETKNAMIITTTPTIEGKRIVRYCGVVAGEAILGANLFKDLFANIRDMVGGRSATYERELQRARDIALREL EERAEELGATAVVGVDLDYEVMGQGNGMLMVSASGTAVVVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family [H]
Homologues:
Organism=Escherichia coli, GI1787091, Length=103, Percent_Identity=66.0194174757282, Blast_Score=143, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002765 [H]
Pfam domain/function: PF01906 DUF74 [H]
EC number: NA
Molecular weight: Translated: 13110; Mature: 13110
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSMISTPRKETKNAMIITTTPTIEGKRIVRYCGVVAGEAILGANLFKDLFANIRDMVGG CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RSATYERELQRARDIALRELEERAEELGATAVVGVDLDYEVMGQGNGMLMVSASGTAVVV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCEEEEECCCCEEEE E C >Mature Secondary Structure MLSMISTPRKETKNAMIITTTPTIEGKRIVRYCGVVAGEAILGANLFKDLFANIRDMVGG CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RSATYERELQRARDIALRELEERAEELGATAVVGVDLDYEVMGQGNGMLMVSASGTAVVV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCEEEEECCCCEEEE E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA