Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997885
Identifier: 39997885
GI number: 39997885
Start: 3071446
End: 3072198
Strand: Direct
Name: 39997885
Synonym: GSU2792
Alternate gene names: NA
Gene position: 3071446-3072198 (Clockwise)
Preceding gene: 308513329
Following gene: 39997887
Centisome position: 80.53
GC content: 69.32
Gene sequence:
>753_bases ATGGCGGAGGGGTTCAAGGACTATTTTTCCGACACTTCCGATGCGTACCGGACCTATCGCCCCGAGTATCCGGACGCGCT CTTCGCGTGGCTGGCCGGGCTTCCGCCCCGCCGGGACGCCGCCCTCGATTGCGGCTGCGGCACCGGCCAGGCATCGGTGG TCCTTGCCAGCTACTTTCCCCGGGTCTACGCGGTGGACCCCAGCGCCGGCCAGATAGCCAGCGCCGTCCCCCACGAGGGG GTCGTGTACCGCGTGGCCCCGGCGGAACAGACAGGGCTGCCCGGTGCGAGCGTTGACCTGGTGGTGGCCGCCCAGGCTCT CCACTGGTTCGACTTCGACCGGTTCTACCCGGAGGTGCGCCGGGTCGGGCGACCCGGCTCCGTATTCGCCGCCTTCAGCT ACGGCCTGCTTTCCATCGACGCGGACCTGGACCGGATCATCGGCCGGTTCTACCGCGAGGTGATCGGTCGCTACTGGCCC CCCGAACGGGCCCACGTGGACGACGGCTACCGCTCCATCCCCTTCCCGTTCCCCGAAATCGCTGCGCCTCCCTTTGCCAT GGAGGCACGCTGGGAACTGGAGCACCTGCTCGGCTACCTGGCAACCTGGTCTGCAGTCAGGGAATACCGGCAACGGCTCG GCACCGATCCGCTGCCGGAGCTTGCCCGGGAGGTGCGGGACGCCTGGGGCATCCCGGAGGAGGGACGAACCATTGTCTGG CCCCTGGCGCTGCGGGTGGGGCGCATCGCGTAG
Upstream 100 bases:
>100_bases GTCGATCTTGACTACGAGGTCATGGGACAGGGGAACGGGATGCTGATGGTCTCGGCCAGCGGTACGGCGGTGGTGGTCGA GTAGAAAGGGAGAGGACGCC
Downstream 100 bases:
>100_bases GGCGGTGTCAGCCCCGCCGGTGGGGTATGGATGCCAGGGCCCCCTTGAGGTCCGCCAGGGCCTGCTCGATCTCCGCCACG TTTGCCTCGATTTCTTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Domain Family; UbiE/COQ5 Methyltransferase
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAEGFKDYFSDTSDAYRTYRPEYPDALFAWLAGLPPRRDAALDCGCGTGQASVVLASYFPRVYAVDPSAGQIASAVPHEG VVYRVAPAEQTGLPGASVDLVVAAQALHWFDFDRFYPEVRRVGRPGSVFAAFSYGLLSIDADLDRIIGRFYREVIGRYWP PERAHVDDGYRSIPFPFPEIAAPPFAMEARWELEHLLGYLATWSAVREYRQRLGTDPLPELAREVRDAWGIPEEGRTIVW PLALRVGRIA
Sequences:
>Translated_250_residues MAEGFKDYFSDTSDAYRTYRPEYPDALFAWLAGLPPRRDAALDCGCGTGQASVVLASYFPRVYAVDPSAGQIASAVPHEG VVYRVAPAEQTGLPGASVDLVVAAQALHWFDFDRFYPEVRRVGRPGSVFAAFSYGLLSIDADLDRIIGRFYREVIGRYWP PERAHVDDGYRSIPFPFPEIAAPPFAMEARWELEHLLGYLATWSAVREYRQRLGTDPLPELAREVRDAWGIPEEGRTIVW PLALRVGRIA >Mature_249_residues AEGFKDYFSDTSDAYRTYRPEYPDALFAWLAGLPPRRDAALDCGCGTGQASVVLASYFPRVYAVDPSAGQIASAVPHEGV VYRVAPAEQTGLPGASVDLVVAAQALHWFDFDRFYPEVRRVGRPGSVFAAFSYGLLSIDADLDRIIGRFYREVIGRYWPP ERAHVDDGYRSIPFPFPEIAAPPFAMEARWELEHLLGYLATWSAVREYRQRLGTDPLPELAREVRDAWGIPEEGRTIVWP LALRVGRIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322003, Length=131, Percent_Identity=30.5343511450382, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27986; Mature: 27855
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGFKDYFSDTSDAYRTYRPEYPDALFAWLAGLPPRRDAALDCGCGTGQASVVLASYFP CCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHCC RVYAVDPSAGQIASAVPHEGVVYRVAPAEQTGLPGASVDLVVAAQALHWFDFDRFYPEVR EEEEECCCCCHHHHCCCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RVGRPGSVFAAFSYGLLSIDADLDRIIGRFYREVIGRYWPPERAHVDDGYRSIPFPFPEI HCCCCCCCHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH AAPPFAMEARWELEHLLGYLATWSAVREYRQRLGTDPLPELAREVRDAWGIPEEGRTIVW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEE PLALRVGRIA HHHHHHHCCC >Mature Secondary Structure AEGFKDYFSDTSDAYRTYRPEYPDALFAWLAGLPPRRDAALDCGCGTGQASVVLASYFP CCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHCC RVYAVDPSAGQIASAVPHEGVVYRVAPAEQTGLPGASVDLVVAAQALHWFDFDRFYPEVR EEEEECCCCCHHHHCCCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RVGRPGSVFAAFSYGLLSIDADLDRIIGRFYREVIGRYWPPERAHVDDGYRSIPFPFPEI HCCCCCCCHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH AAPPFAMEARWELEHLLGYLATWSAVREYRQRLGTDPLPELAREVRDAWGIPEEGRTIVW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEE PLALRVGRIA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA