| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234236
Identifier: 38234236
GI number: 38234236
Start: 1699190
End: 1700449
Strand: Direct
Name: 38234236
Synonym: DIP1663
Alternate gene names: NA
Gene position: 1699190-1700449 (Clockwise)
Preceding gene: 38234235
Following gene: 38234240
Centisome position: 68.28
GC content: 55.56
Gene sequence:
>1260_bases ATGCCTCAAAAGCAGCAATCGGCCGTGCATCCACGCGACTGGTTCCCAGTAGCAGCCACAATGATCGCCATCGCTTGGGG AGGCAACGAATTTACCTCCTTGCTCGTCATGTACCGCGCAACCAGCCATTTCGAACAAGTCGTGGTCAACGGACTCCTCG GTGCCTATGTGATCGGCATCGTCCCCGCCCTGCTTATAGCAGGACCCCTATCAGACCTTATCGGTCGACGCCCCACTCTC CTACCCGCAATACCTATCTCATTATTCGGATCCGTCCTCATGTCCTTGGCACCACACCATCCCGTGGTCATTGGTGCAGG CCGTATCTTTTCCGGAATCGCCCTCGGCCTCGTCATGGCCGTAGGTTCTACATGGATCACTGAACTTTCCGCCGCTAGTG GCACCGATGCCACAGCAGGTCCCCGGCGCGCCGGATTATGCCTGACCGGTGGTTTTCTCGTTGGCGCCGGTGTGGCTTCA ATTCTTGCCCAGTGGGCGCCAGCTCCTGCCCACACGCCTTATGTGCTGCACATTATCCTGACCGTATTCACTGGTTTTTG GCTCTTAAAGGCACCAGAAACCAACGCCCCCGAGCTAGGTACGGTCAAGGCAGCGTGGCAAACAGTTGGCTTTCGACGTT TCTTCCAAGATCTGCGTATCCCCGCTGCTGCACACAAGCGATTCTTACGCGTAGTTGTTCCCGTAGCCCCCTGGGTTTTT GGTTGTGCGGGCGCAGCCTATGCGATTCTCCCCCAGCTACTTGCTACTTCAGCAGGAAATACCCCTATCGCATTTTCTGG GTTGATGACGGTTCTCACTCTTGGTTGTGGTGCTGGAATTCAGATCGTCGGCAAGCTGATTGATACCCGCGAGTCTGCGC GCGCATCGGTCGTTGCCATGGCGATTATTACTGTTGGAGTTGCTATTGGAGCCGTCGCAGCCTCCGACCTTAACATTTGG ATCGGAATTCTCTCGGCCATGCTGATGGGTATGGGCTACGGTCTAGCATTGGTGGCTGGCTTGTCCGAGGTACAACGCAT TGCCCAAGCAGATGATCTTGCAGGCCTCACAGCAGTCTATTATTCGGTTGCTTACCTAGGCTTTTTCATCCCGATGGCCT TCGCAGCATTAAATGCACGTTTTAGCTACACGGTGCTGTTTTCAGTAGGCACCGTGCTCGCACTCGCATGTTTGATTGCG GTTACCACCGCATGGCGAGCCCATCTACCAGGTGTTCGCCATATCGCGGTAGCTGCCTAG
Upstream 100 bases:
>100_bases GGCAATCCGCGACGGCAATAGCGACACCTACCAACAGGTTCTTTCTGAACACCTTGCCACTTCGCAACATCAGTTTTAAC GACACACAGTAAGAAGAGCT
Downstream 100 bases:
>100_bases CGGCGTCGTTCTCGTTTTTCGTATCCCATGCGCGGCCGGAAGCCTTCTGGCCGCCGCAACTGGGCTACGGCGTCTCCGAC AACCAACCTAAAACGTGGTT
Product: MFS family transporter
Products: NA
Alternate protein names: MFS Transporter; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; Facilitator Transporter; Facilitator Superfamily Multidrug Resistance Protein; Drug Resistance Efflux Protein; Mfs Transporter; Permease Of Facilitator Superfamily; Mutlidrug Resistance Protein; MFS Superfamily Transporter; Transporter Protein; Facilitator Superfamily; Arabinose Efflux Permease Family Protein; Permease Facilitator Family Protein; MFS Family Transporter; Facilitator Family Permease; Multidrug-Efflux MFS Permease
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MPQKQQSAVHPRDWFPVAATMIAIAWGGNEFTSLLVMYRATSHFEQVVVNGLLGAYVIGIVPALLIAGPLSDLIGRRPTL LPAIPISLFGSVLMSLAPHHPVVIGAGRIFSGIALGLVMAVGSTWITELSAASGTDATAGPRRAGLCLTGGFLVGAGVAS ILAQWAPAPAHTPYVLHIILTVFTGFWLLKAPETNAPELGTVKAAWQTVGFRRFFQDLRIPAAAHKRFLRVVVPVAPWVF GCAGAAYAILPQLLATSAGNTPIAFSGLMTVLTLGCGAGIQIVGKLIDTRESARASVVAMAIITVGVAIGAVAASDLNIW IGILSAMLMGMGYGLALVAGLSEVQRIAQADDLAGLTAVYYSVAYLGFFIPMAFAALNARFSYTVLFSVGTVLALACLIA VTTAWRAHLPGVRHIAVAA
Sequences:
>Translated_419_residues MPQKQQSAVHPRDWFPVAATMIAIAWGGNEFTSLLVMYRATSHFEQVVVNGLLGAYVIGIVPALLIAGPLSDLIGRRPTL LPAIPISLFGSVLMSLAPHHPVVIGAGRIFSGIALGLVMAVGSTWITELSAASGTDATAGPRRAGLCLTGGFLVGAGVAS ILAQWAPAPAHTPYVLHIILTVFTGFWLLKAPETNAPELGTVKAAWQTVGFRRFFQDLRIPAAAHKRFLRVVVPVAPWVF GCAGAAYAILPQLLATSAGNTPIAFSGLMTVLTLGCGAGIQIVGKLIDTRESARASVVAMAIITVGVAIGAVAASDLNIW IGILSAMLMGMGYGLALVAGLSEVQRIAQADDLAGLTAVYYSVAYLGFFIPMAFAALNARFSYTVLFSVGTVLALACLIA VTTAWRAHLPGVRHIAVAA >Mature_418_residues PQKQQSAVHPRDWFPVAATMIAIAWGGNEFTSLLVMYRATSHFEQVVVNGLLGAYVIGIVPALLIAGPLSDLIGRRPTLL PAIPISLFGSVLMSLAPHHPVVIGAGRIFSGIALGLVMAVGSTWITELSAASGTDATAGPRRAGLCLTGGFLVGAGVASI LAQWAPAPAHTPYVLHIILTVFTGFWLLKAPETNAPELGTVKAAWQTVGFRRFFQDLRIPAAAHKRFLRVVVPVAPWVFG CAGAAYAILPQLLATSAGNTPIAFSGLMTVLTLGCGAGIQIVGKLIDTRESARASVVAMAIITVGVAIGAVAASDLNIWI GILSAMLMGMGYGLALVAGLSEVQRIAQADDLAGLTAVYYSVAYLGFFIPMAFAALNARFSYTVLFSVGTVLALACLIAV TTAWRAHLPGVRHIAVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43616; Mature: 43485
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQKQQSAVHPRDWFPVAATMIAIAWGGNEFTSLLVMYRATSHFEQVVVNGLLGAYVIGI CCCCCCCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPALLIAGPLSDLIGRRPTLLPAIPISLFGSVLMSLAPHHPVVIGAGRIFSGIALGLVMA HHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHH VGSTWITELSAASGTDATAGPRRAGLCLTGGFLVGAGVASILAQWAPAPAHTPYVLHIIL HHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH TVFTGFWLLKAPETNAPELGTVKAAWQTVGFRRFFQDLRIPAAAHKRFLRVVVPVAPWVF HHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH GCAGAAYAILPQLLATSAGNTPIAFSGLMTVLTLGCGAGIQIVGKLIDTRESARASVVAM HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AIITVGVAIGAVAASDLNIWIGILSAMLMGMGYGLALVAGLSEVQRIAQADDLAGLTAVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSVAYLGFFIPMAFAALNARFSYTVLFSVGTVLALACLIAVTTAWRAHLPGVRHIAVAA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC >Mature Secondary Structure PQKQQSAVHPRDWFPVAATMIAIAWGGNEFTSLLVMYRATSHFEQVVVNGLLGAYVIGI CCCCCCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPALLIAGPLSDLIGRRPTLLPAIPISLFGSVLMSLAPHHPVVIGAGRIFSGIALGLVMA HHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHH VGSTWITELSAASGTDATAGPRRAGLCLTGGFLVGAGVASILAQWAPAPAHTPYVLHIIL HHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH TVFTGFWLLKAPETNAPELGTVKAAWQTVGFRRFFQDLRIPAAAHKRFLRVVVPVAPWVF HHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH GCAGAAYAILPQLLATSAGNTPIAFSGLMTVLTLGCGAGIQIVGKLIDTRESARASVVAM HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AIITVGVAIGAVAASDLNIWIGILSAMLMGMGYGLALVAGLSEVQRIAQADDLAGLTAVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSVAYLGFFIPMAFAALNARFSYTVLFSVGTVLALACLIAVTTAWRAHLPGVRHIAVAA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA