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The map label for this gene is yfiH [C]

Identifier: 38234169

GI number: 38234169

Start: 1623168

End: 1623908

Strand: Reverse

Name: yfiH [C]

Synonym: DIP1594

Alternate gene names: 38234169

Gene position: 1623908-1623168 (Counterclockwise)

Preceding gene: 38234170

Following gene: 38234168

Centisome position: 65.25

GC content: 52.23

Gene sequence:

>741_bases
ATGAGTACATCTGTGCACAACCGTCCTGTTCGTAAGGTTTTCACCAATCGATTAGGAGGGGTATCGCAACCGCCATATAG
CTCTTTTAACCTAGGCGATCACGTGGGTGATGACCCAGCATCTGTGGCTGCTAATCGTAAGCGTCTCGCCTCGGTTATTG
GTCTGCCGGAAACTTCATTGGTGTGGATGGAACAAATCCATTCCAACACTGTGACAGTGGTAGATGAGGCTAATAAAAAC
AGCGGTGTTATACCTGCTACCGACGCAATAATTGCCACGAAGCGTGGTCTTGCATTGTGTGTCTTGGTGGCCGATTGTGT
ACCTGTACTTATCTCGGATACCGAAGCCGGTGTCATTGCGGCGGTCCACGCTGGGCGGCTGGGCGCTCGTAACGGGATCG
TCGCAAAAACAGTGGAAGCCATGACAACATTGGGCGCACATCCTCGCAACATGCACGTGTTGATGGGGGCTGCGGCCTCG
GGGAAAAACTACGAGGTGCCCACGCAGATGGCGGAAGACGTTGAAAAGCATCTGCCGGGCTCCCAATGCACAACGCACAA
GGGGACCACGGGTATCGATGTGCGAAAAGGGCTCATTAGGCAATTGCTTGGGCTAGGAGTGCGAGCAATTGACGCAGACC
CTCGCTGTACTATTGAAGATCAAGATTTTTTCTCGTATCGCCGTGAAGGTAAAACGGGAAGGCAGGCGGGAGTTATTTGG
CTCCCCGAAAAACAAAAATAA

Upstream 100 bases:

>100_bases
AGGGAATGTACACGCGCCGGTCGGTGCCTCGTGAGTCCTATCGCGATCAGCGTTCTGATGACTTTGATGACGATCTCGAT
ATTCCAGACTTCCTACGCTA

Downstream 100 bases:

>100_bases
ATATCAAATCATCTGATTTGTCATTTGTCTGTGTCGCTCTATCGGCATACACAAAAATCCACGTAGTTTAATCAATGAGA
AGCAGCTCAGTTTAAGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSTSVHNRPVRKVFTNRLGGVSQPPYSSFNLGDHVGDDPASVAANRKRLASVIGLPETSLVWMEQIHSNTVTVVDEANKN
SGVIPATDAIIATKRGLALCVLVADCVPVLISDTEAGVIAAVHAGRLGARNGIVAKTVEAMTTLGAHPRNMHVLMGAAAS
GKNYEVPTQMAEDVEKHLPGSQCTTHKGTTGIDVRKGLIRQLLGLGVRAIDADPRCTIEDQDFFSYRREGKTGRQAGVIW
LPEKQK

Sequences:

>Translated_246_residues
MSTSVHNRPVRKVFTNRLGGVSQPPYSSFNLGDHVGDDPASVAANRKRLASVIGLPETSLVWMEQIHSNTVTVVDEANKN
SGVIPATDAIIATKRGLALCVLVADCVPVLISDTEAGVIAAVHAGRLGARNGIVAKTVEAMTTLGAHPRNMHVLMGAAAS
GKNYEVPTQMAEDVEKHLPGSQCTTHKGTTGIDVRKGLIRQLLGLGVRAIDADPRCTIEDQDFFSYRREGKTGRQAGVIW
LPEKQK
>Mature_245_residues
STSVHNRPVRKVFTNRLGGVSQPPYSSFNLGDHVGDDPASVAANRKRLASVIGLPETSLVWMEQIHSNTVTVVDEANKNS
GVIPATDAIIATKRGLALCVLVADCVPVLISDTEAGVIAAVHAGRLGARNGIVAKTVEAMTTLGAHPRNMHVLMGAAASG
KNYEVPTQMAEDVEKHLPGSQCTTHKGTTGIDVRKGLIRQLLGLGVRAIDADPRCTIEDQDFFSYRREGKTGRQAGVIWL
PEKQK

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=242, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI190194372, Length=242, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1788945, Length=236, Percent_Identity=36.0169491525424, Blast_Score=124, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26264; Mature: 26133

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSVHNRPVRKVFTNRLGGVSQPPYSSFNLGDHVGDDPASVAANRKRLASVIGLPETSL
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
VWMEQIHSNTVTVVDEANKNSGVIPATDAIIATKRGLALCVLVADCVPVLISDTEAGVIA
HHHHHHCCCEEEEEECCCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHEEECCCCCCEEE
AVHAGRLGARNGIVAKTVEAMTTLGAHPRNMHVLMGAAASGKNYEVPTQMAEDVEKHLPG
EECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
SQCTTHKGTTGIDVRKGLIRQLLGLGVRAIDADPRCTIEDQDFFSYRREGKTGRQAGVIW
CCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCEECCHHHHHHHHCCCCCCCCCEEE
LPEKQK
CCCCCC
>Mature Secondary Structure 
STSVHNRPVRKVFTNRLGGVSQPPYSSFNLGDHVGDDPASVAANRKRLASVIGLPETSL
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
VWMEQIHSNTVTVVDEANKNSGVIPATDAIIATKRGLALCVLVADCVPVLISDTEAGVIA
HHHHHHCCCEEEEEECCCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHEEECCCCCCEEE
AVHAGRLGARNGIVAKTVEAMTTLGAHPRNMHVLMGAAASGKNYEVPTQMAEDVEKHLPG
EECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
SQCTTHKGTTGIDVRKGLIRQLLGLGVRAIDADPRCTIEDQDFFSYRREGKTGRQAGVIW
CCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCEECCHHHHHHHHCCCCCCCCCEEE
LPEKQK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9240446; 9738885; 12948626 [H]