| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is lgt
Identifier: 38234129
GI number: 38234129
Start: 1583263
End: 1584114
Strand: Reverse
Name: lgt
Synonym: DIP1554
Alternate gene names: 38234129
Gene position: 1584114-1583263 (Counterclockwise)
Preceding gene: 38234130
Following gene: 38234128
Centisome position: 63.65
GC content: 49.06
Gene sequence:
>852_bases GTGGGAAACATCCAATATCTTGCGGCTATTCCATCGCCTCCTCAAGGTGTATGGCACCTTGGCCCAGTACCGATTCGCGC GTATGCGCTGTGCATTATCGTTGGTATTTTCGTTGCGATGAAGATTGGTTCAGTTCGCTACCAGCAACGAGGCGGTAACC CTGATTTGGTTATCGATGCGGGTATTGTCGCCGTAATTGCCGGAATTATTGGTGGTCGTTTGTATCACGTCCTGACGGAT AACCAAAAGTATTTTTGTGCTGATTGCAACCCAGTTGATGTTTTTAAAATTACTAATGGTGGTTTGGGAATTTGGGGAGC GGTAGCGCTTGGCACCATTGCGGTTTACTTCTATCTCAAGAAAAAAGGTGTTGCTTTTGCTCTGTTCGCAGATGCTGTCG CACCTGGAATTATTTTGGCGCAAGCCATTGGACGATTAGGCAACTGGTTTAACCAAGAACTTTATGGCCGTGAAACCTCT GTGCCTTGGGCACTGGAGATCTATTACCGCGTAGACGCATCGGGGAAATTTGCGCCGCTAACGGGTCATTCCACGGGCGA GGTGATGGCTACTGTTCATCCGACGTTTTTATACGAGATGATATGGAACCTTGTAATTTTCGCGGTGCTGTTGTGGGCCG ATAAGAAGTTCCAGTTGGGGCATGGCAGGGTATTTGCGCTGTACGTGGCTGGCTACACTGCGGGTCGATTTGTTGTTGAA AATATGCGTGCCGACGACGCCACGATGGTGTTTGGACTTCGAATCAACGTGATTGTTTCGGTGGTTGTTTGCGCTATTGC AGTGGGGGCTTTGTTCGCGTTACGACGTGGGCGTGAATCCATTTCGAGCTAA
Upstream 100 bases:
>100_bases GCCAGCATCCCTCGTGTCCCTCACGTTAGCGAAAGCAACGGTTAAGATGGTCCACAGTGTGACTTTGTCCTGAGACTAAA AATACTGTGGAGAAAAATTA
Downstream 100 bases:
>100_bases AGCTTCACATCTGATTCGTCAAGTGTGATTGAAATCGCTTTCAATTTTTTGACACGTTGAATTTTGCCCGAATATGTCCG AAAGTGCCCGCTTGTGGGCG
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MGNIQYLAAIPSPPQGVWHLGPVPIRAYALCIIVGIFVAMKIGSVRYQQRGGNPDLVIDAGIVAVIAGIIGGRLYHVLTD NQKYFCADCNPVDVFKITNGGLGIWGAVALGTIAVYFYLKKKGVAFALFADAVAPGIILAQAIGRLGNWFNQELYGRETS VPWALEIYYRVDASGKFAPLTGHSTGEVMATVHPTFLYEMIWNLVIFAVLLWADKKFQLGHGRVFALYVAGYTAGRFVVE NMRADDATMVFGLRINVIVSVVVCAIAVGALFALRRGRESISS
Sequences:
>Translated_283_residues MGNIQYLAAIPSPPQGVWHLGPVPIRAYALCIIVGIFVAMKIGSVRYQQRGGNPDLVIDAGIVAVIAGIIGGRLYHVLTD NQKYFCADCNPVDVFKITNGGLGIWGAVALGTIAVYFYLKKKGVAFALFADAVAPGIILAQAIGRLGNWFNQELYGRETS VPWALEIYYRVDASGKFAPLTGHSTGEVMATVHPTFLYEMIWNLVIFAVLLWADKKFQLGHGRVFALYVAGYTAGRFVVE NMRADDATMVFGLRINVIVSVVVCAIAVGALFALRRGRESISS >Mature_282_residues GNIQYLAAIPSPPQGVWHLGPVPIRAYALCIIVGIFVAMKIGSVRYQQRGGNPDLVIDAGIVAVIAGIIGGRLYHVLTDN QKYFCADCNPVDVFKITNGGLGIWGAVALGTIAVYFYLKKKGVAFALFADAVAPGIILAQAIGRLGNWFNQELYGRETSV PWALEIYYRVDASGKFAPLTGHSTGEVMATVHPTFLYEMIWNLVIFAVLLWADKKFQLGHGRVFALYVAGYTAGRFVVEN MRADDATMVFGLRINVIVSVVVCAIAVGALFALRRGRESISS
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=242, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_CORDI (P60969)
Other databases:
- EMBL: BX248358 - RefSeq: NP_939896.1 - GeneID: 2650743 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP1554 - NMPDR: fig|257309.1.peg.1487 - HOGENOM: HBG450278 - OMA: VIWADRR - ProtClustDB: PRK00052 - BioCyc: CDIP257309:DIP1554-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 30676; Mature: 30545
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x11ebb6cc)-; HASH(0x451cefac)-; HASH(0xcee89c4)-; HASH(0xd3f318c)-; HASH(0xd3d7124)-; HASH(0xd0d8360)-; HASH(0xd13ddcc)-;
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNIQYLAAIPSPPQGVWHLGPVPIRAYALCIIVGIFVAMKIGSVRYQQRGGNPDLVIDA CCCEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCEEEEC GIVAVIAGIIGGRLYHVLTDNQKYFCADCNPVDVFKITNGGLGIWGAVALGTIAVYFYLK HHHHHHHHHHCCEEEEEEECCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHEEC KKGVAFALFADAVAPGIILAQAIGRLGNWFNQELYGRETSVPWALEIYYRVDASGKFAPL CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEE TGHSTGEVMATVHPTFLYEMIWNLVIFAVLLWADKKFQLGHGRVFALYVAGYTAGRFVVE CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCCHHHEE NMRADDATMVFGLRINVIVSVVVCAIAVGALFALRRGRESISS CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure GNIQYLAAIPSPPQGVWHLGPVPIRAYALCIIVGIFVAMKIGSVRYQQRGGNPDLVIDA CCEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCEEEEC GIVAVIAGIIGGRLYHVLTDNQKYFCADCNPVDVFKITNGGLGIWGAVALGTIAVYFYLK HHHHHHHHHHCCEEEEEEECCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHEEC KKGVAFALFADAVAPGIILAQAIGRLGNWFNQELYGRETSVPWALEIYYRVDASGKFAPL CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEE TGHSTGEVMATVHPTFLYEMIWNLVIFAVLLWADKKFQLGHGRVFALYVAGYTAGRFVVE CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCCHHHEE NMRADDATMVFGLRINVIVSVVVCAIAVGALFALRRGRESISS CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14602910