| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is pyk [H]
Identifier: 38234128
GI number: 38234128
Start: 1581632
End: 1583053
Strand: Reverse
Name: pyk [H]
Synonym: DIP1553
Alternate gene names: 38234128
Gene position: 1583053-1581632 (Counterclockwise)
Preceding gene: 38234129
Following gene: 38234124
Centisome position: 63.61
GC content: 51.83
Gene sequence:
>1422_bases ATGGAACGTCGAACTAAGATTGTTTGTACATTAGGGCCGGCAGTCGCTTCCCGTGAGGGAATTCTTGGACTGGTTAAAGC CGGCATGAATGTCGCACGTATGAATATGTCACACGGCGACCACGCAGATCATGAGAAGAATTACCAGTGGGTCCGCGAAG CTACGGATGAAACCGGACGCGCTGTTGGTATTCTTGCCGATCTGCAGGGGCCAAAGATTCGTCTCGGTCGCTTTATCGAT GGCGCAACGGTGTGGGAGAACGGTGAAATCGTTCGTATCACTGTTGATGACATTGAAGGTACACACGACCGTGTGTCTAC CACCTACAAGAACCTCGCTAAAGATGCGAAGCCTGGCGATCGTCTTTTGGTCGACGACGGCAAGGTTGCATTGCGCTGTG TTGAAGTAGATGGAAACGATGTTGTTTGTGAGGTTGTAGAAGGCGGCCCAGTCTCTAACAACAAGGGTGTTTCCCTTCCT GGAATGGATATTTCCGTTCCAGCTTTGTCTGAAAAAGACATTGCTGATTTGCGCTTCGCTCTCAATCTCGGTGTTGACAT TATTGCGTTGTCCTTCGTCCGCTCCCCAGCAGACGTGGAACTTGTTCATGCCATCATGGATGAAGAAGGTCGCCGTTGCC CAGTGATCGCAAAGCTTGAGAAGCCAGAAGCCATGGACGCTTTGGAGTCCATCGTATTGGCTTTCGACGGCATCATGATT GCTCGTGGTGACTTGGGTGTTGAGTGCCCGTTGGAGCAGGTGCCGCTGTTCCAGAAGCGTGCCATCCAGATTGCTCGTGA AAACGCTAAGCCTGTGATTGTGGCAACCCAGATGCTCGATTCCATGATCGAGAACCTACGCCCAACCCGTGCTGAGGCTT CTGACGTAGCTAACGCTGTTCTTGACGGTGCAGATGCCGTTATGCTGTCCGGTGAGACTTCGGTCGGTATCGATCCAGCT AACGTTGTCCGTACTATGTCACGTATCGTTTCCTACGCTGAGATTGATGGCCGGGTACCAAACTTGGCTCATATTCCACG CACCAAGCGTGGCGTGATTTCCTACTCTGCACGCGACATTGCAGAGCGTTTGAATGCAAAGGCACTTGTAGCATTCACCT CTTCAGGTGATACCGCAAAGCGTGTTGCTCGTTTGCACTCGCAGCTGCCGCTATTGGTCTTTACCCCTCACCAAGAAGTC CGCTCTCAGTTGGCTTTGACTTGGGGTGTAGAAACCTTCCTTACCGACGAGGTTAAGGACACAGACGAGATGATGCGTAC GATCGATGAGCAGTTGCTTGCTCTCGATACCTACAGCGAAGATGACATGATCGTGCTCGTAGCCGGAACCCCTCCAGGAG TCCAAGGCAATACCAACATGATCCATGTACACCACCTAGGTGAGGACCTCAACGGTCTATAA
Upstream 100 bases:
>100_bases TGTGATTTTGGCGTGTGATGGCGCCCAACTGGCTATTTAGTTGCCTTTCACACGGTCCGATTCCTAGCGGTGATCCGCTA ACAGGGTTAGTGTTTAGGGC
Downstream 100 bases:
>100_bases ATCTTGGATAATAAAAGACCACCGTGGTCAGGGGATAAACCTTTCCACGGTGGATTTTTTATGCACTAGTGGTTAATCGG CGTTGCGTCGATCTTCCATA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MERRTKIVCTLGPAVASREGILGLVKAGMNVARMNMSHGDHADHEKNYQWVREATDETGRAVGILADLQGPKIRLGRFID GATVWENGEIVRITVDDIEGTHDRVSTTYKNLAKDAKPGDRLLVDDGKVALRCVEVDGNDVVCEVVEGGPVSNNKGVSLP GMDISVPALSEKDIADLRFALNLGVDIIALSFVRSPADVELVHAIMDEEGRRCPVIAKLEKPEAMDALESIVLAFDGIMI ARGDLGVECPLEQVPLFQKRAIQIARENAKPVIVATQMLDSMIENLRPTRAEASDVANAVLDGADAVMLSGETSVGIDPA NVVRTMSRIVSYAEIDGRVPNLAHIPRTKRGVISYSARDIAERLNAKALVAFTSSGDTAKRVARLHSQLPLLVFTPHQEV RSQLALTWGVETFLTDEVKDTDEMMRTIDEQLLALDTYSEDDMIVLVAGTPPGVQGNTNMIHVHHLGEDLNGL
Sequences:
>Translated_473_residues MERRTKIVCTLGPAVASREGILGLVKAGMNVARMNMSHGDHADHEKNYQWVREATDETGRAVGILADLQGPKIRLGRFID GATVWENGEIVRITVDDIEGTHDRVSTTYKNLAKDAKPGDRLLVDDGKVALRCVEVDGNDVVCEVVEGGPVSNNKGVSLP GMDISVPALSEKDIADLRFALNLGVDIIALSFVRSPADVELVHAIMDEEGRRCPVIAKLEKPEAMDALESIVLAFDGIMI ARGDLGVECPLEQVPLFQKRAIQIARENAKPVIVATQMLDSMIENLRPTRAEASDVANAVLDGADAVMLSGETSVGIDPA NVVRTMSRIVSYAEIDGRVPNLAHIPRTKRGVISYSARDIAERLNAKALVAFTSSGDTAKRVARLHSQLPLLVFTPHQEV RSQLALTWGVETFLTDEVKDTDEMMRTIDEQLLALDTYSEDDMIVLVAGTPPGVQGNTNMIHVHHLGEDLNGL >Mature_473_residues MERRTKIVCTLGPAVASREGILGLVKAGMNVARMNMSHGDHADHEKNYQWVREATDETGRAVGILADLQGPKIRLGRFID GATVWENGEIVRITVDDIEGTHDRVSTTYKNLAKDAKPGDRLLVDDGKVALRCVEVDGNDVVCEVVEGGPVSNNKGVSLP GMDISVPALSEKDIADLRFALNLGVDIIALSFVRSPADVELVHAIMDEEGRRCPVIAKLEKPEAMDALESIVLAFDGIMI ARGDLGVECPLEQVPLFQKRAIQIARENAKPVIVATQMLDSMIENLRPTRAEASDVANAVLDGADAVMLSGETSVGIDPA NVVRTMSRIVSYAEIDGRVPNLAHIPRTKRGVISYSARDIAERLNAKALVAFTSSGDTAKRVARLHSQLPLLVFTPHQEV RSQLALTWGVETFLTDEVKDTDEMMRTIDEQLLALDTYSEDDMIVLVAGTPPGVQGNTNMIHVHHLGEDLNGL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=487, Percent_Identity=36.9609856262834, Blast_Score=281, Evalue=8e-76, Organism=Homo sapiens, GI33286422, Length=488, Percent_Identity=36.8852459016393, Blast_Score=278, Evalue=8e-75, Organism=Homo sapiens, GI33286420, Length=488, Percent_Identity=36.8852459016393, Blast_Score=278, Evalue=8e-75, Organism=Homo sapiens, GI32967597, Length=487, Percent_Identity=36.7556468172485, Blast_Score=268, Evalue=6e-72, Organism=Homo sapiens, GI10835121, Length=487, Percent_Identity=36.7556468172485, Blast_Score=268, Evalue=7e-72, Organism=Homo sapiens, GI310128732, Length=288, Percent_Identity=39.5833333333333, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI310128730, Length=288, Percent_Identity=39.5833333333333, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI310128736, Length=236, Percent_Identity=37.2881355932203, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI310128734, Length=236, Percent_Identity=37.2881355932203, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=36.2790697674419, Blast_Score=135, Evalue=6e-32, Organism=Escherichia coli, GI1787965, Length=472, Percent_Identity=39.8305084745763, Blast_Score=314, Evalue=6e-87, Organism=Escherichia coli, GI1788160, Length=432, Percent_Identity=41.6666666666667, Blast_Score=288, Evalue=4e-79, Organism=Caenorhabditis elegans, GI17544584, Length=422, Percent_Identity=37.2037914691943, Blast_Score=283, Evalue=2e-76, Organism=Caenorhabditis elegans, GI71984413, Length=424, Percent_Identity=40.8018867924528, Blast_Score=265, Evalue=3e-71, Organism=Caenorhabditis elegans, GI17506829, Length=424, Percent_Identity=40.8018867924528, Blast_Score=265, Evalue=3e-71, Organism=Caenorhabditis elegans, GI71984406, Length=424, Percent_Identity=40.8018867924528, Blast_Score=265, Evalue=4e-71, Organism=Caenorhabditis elegans, GI17506831, Length=424, Percent_Identity=40.8018867924528, Blast_Score=265, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6324923, Length=492, Percent_Identity=33.130081300813, Blast_Score=253, Evalue=4e-68, Organism=Saccharomyces cerevisiae, GI6319279, Length=480, Percent_Identity=35, Blast_Score=251, Evalue=1e-67, Organism=Drosophila melanogaster, GI24648964, Length=487, Percent_Identity=38.1930184804928, Blast_Score=281, Evalue=7e-76, Organism=Drosophila melanogaster, GI28571814, Length=487, Percent_Identity=38.1930184804928, Blast_Score=281, Evalue=9e-76, Organism=Drosophila melanogaster, GI24581235, Length=484, Percent_Identity=32.0247933884297, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24648966, Length=414, Percent_Identity=35.7487922705314, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24646914, Length=291, Percent_Identity=35.0515463917526, Blast_Score=140, Evalue=3e-33,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51338; Mature: 51338
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRTKIVCTLGPAVASREGILGLVKAGMNVARMNMSHGDHADHEKNYQWVREATDETGR CCCCEEEEEEECCHHHCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCC AVGILADLQGPKIRLGRFIDGATVWENGEIVRITVDDIEGTHDRVSTTYKNLAKDAKPGD EEEEEEECCCCCEEECEEECCCEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCC RLLVDDGKVALRCVEVDGNDVVCEVVEGGPVSNNKGVSLPGMDISVPALSEKDIADLRFA EEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHH LNLGVDIIALSFVRSPADVELVHAIMDEEGRRCPVIAKLEKPEAMDALESIVLAFDGIMI HHCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEE ARGDLGVECPLEQVPLFQKRAIQIARENAKPVIVATQMLDSMIENLRPTRAEASDVANAV EECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHH LDGADAVMLSGETSVGIDPANVVRTMSRIVSYAEIDGRVPNLAHIPRTKRGVISYSARDI HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHH AERLNAKALVAFTSSGDTAKRVARLHSQLPLLVFTPHQEVRSQLALTWGVETFLTDEVKD HHHCCCEEEEEEECCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCHHHHHCCCCCC TDEMMRTIDEQLLALDTYSEDDMIVLVAGTPPGVQGNTNMIHVHHLGEDLNGL HHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MERRTKIVCTLGPAVASREGILGLVKAGMNVARMNMSHGDHADHEKNYQWVREATDETGR CCCCEEEEEEECCHHHCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCC AVGILADLQGPKIRLGRFIDGATVWENGEIVRITVDDIEGTHDRVSTTYKNLAKDAKPGD EEEEEEECCCCCEEECEEECCCEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCC RLLVDDGKVALRCVEVDGNDVVCEVVEGGPVSNNKGVSLPGMDISVPALSEKDIADLRFA EEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHH LNLGVDIIALSFVRSPADVELVHAIMDEEGRRCPVIAKLEKPEAMDALESIVLAFDGIMI HHCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEE ARGDLGVECPLEQVPLFQKRAIQIARENAKPVIVATQMLDSMIENLRPTRAEASDVANAV EECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHH LDGADAVMLSGETSVGIDPANVVRTMSRIVSYAEIDGRVPNLAHIPRTKRGVISYSARDI HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHH AERLNAKALVAFTSSGDTAKRVARLHSQLPLLVFTPHQEVRSQLALTWGVETFLTDEVKD HHHCCCEEEEEEECCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCHHHHHCCCCCC TDEMMRTIDEQLLALDTYSEDDMIVLVAGTPPGVQGNTNMIHVHHLGEDLNGL HHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8074528; 12948626 [H]