| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234001
Identifier: 38234001
GI number: 38234001
Start: 1433073
End: 1434116
Strand: Reverse
Name: 38234001
Synonym: DIP1416
Alternate gene names: NA
Gene position: 1434116-1433073 (Counterclockwise)
Preceding gene: 38234004
Following gene: 38233994
Centisome position: 57.63
GC content: 45.21
Gene sequence:
>1044_bases ATGACTTCAACACCACATTCGCCTAGCGAAATGTTTGCTAGCATCCCAGGAATTTTTGGTTTTTATCCCGAAGAGTCAAT CGTCGTACTCACGCTGATGCATACAAAAGAGTCATGCTACCAGCTGGGGCCAGTCATGCGGCTTGATCTGAAAGATCTCC GTTACCTTTCAGATATTGGCGACACTCTTTCTGCAATAGAGCCGGACCTTGTTTTTGGCCTGATTATTTCTGGACAGAAG CCAGAGGCCATTGAAGATCTAAGAGGATTAATTGAATTTGTTGCCGATTGTGAAATAGTTCCATTTGACGCATGTTGGTA TACCTCTGCGATTGAATCTGGCGGAAAATATGATGCTATTTGGCTAAATGAAGCAATGACCGAGGCTGCACTCGAATATC AATCGTGGCGAAAAGGTCGGATTCCACTCATCGCGAATACTGGAATAACAGGTGAAATGATTCATGCTGGGCACCTTCCT GAGCTTTCGCGAAAGGACATTGAAAAACATTACGCGCAAGCTGAGGAATCAGAACAGTGGGATGAATATCTTATTACGGA GCGATACGCGGAGCTTTTCGACGACCCATCGACTTCATTTAGATCTGCACAGGAATGTATTGATGCTTTTTCACAAGCGG TGGAGTTGATGCGGACAGAAAAACTCATCACAGATGCCGCATTGACGGTAGCAGCGTTTCTCAAGAATAAAATGTCGAGA GACATCATCATCGAATGCTGTGTACATAACGCAAATACTGTTAAGGAAGCTCTGTGCTACGTATCGCGTCATACTAAGGG GTTTGTACGGGCAAATGCATTAGCCTTGTACGCTTTATGCATTGTCGATTCCCCGTGGGGTAACCACATAACTTGTGTTC TGCAAGCAGCGCATAACACCTTGCCTTTTCACCATCTCACGGCTCTTGTAGCAGAAGCCTATTATCGAGGCCTATCTGGA TCCATTGTTGATCTTGTTGTCTCTGGGAGCCAAGAAGCGCAGAAACACTTTGGTGAAGCAACAAATGTAAAATCCGCGGT GTGA
Upstream 100 bases:
>100_bases TTGGTGAAAGAACTAGGTTTCCGAGCCTGTAGGGATACTTATCCACAGGTGTTTTGTTTGAGTACAGCAGACTTGTTGTT GTTAGTGCGATTATCCACTT
Downstream 100 bases:
>100_bases CTTCTTGGAAGTCACACCGCGGAGTGTGAAAGATGAATCTACTCGCTGTTATCCGCGAGAAGCGCTATGGGCTTTGTCTC CGAGCTGAGAGGTAAAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTSTPHSPSEMFASIPGIFGFYPEESIVVLTLMHTKESCYQLGPVMRLDLKDLRYLSDIGDTLSAIEPDLVFGLIISGQK PEAIEDLRGLIEFVADCEIVPFDACWYTSAIESGGKYDAIWLNEAMTEAALEYQSWRKGRIPLIANTGITGEMIHAGHLP ELSRKDIEKHYAQAEESEQWDEYLITERYAELFDDPSTSFRSAQECIDAFSQAVELMRTEKLITDAALTVAAFLKNKMSR DIIIECCVHNANTVKEALCYVSRHTKGFVRANALALYALCIVDSPWGNHITCVLQAAHNTLPFHHLTALVAEAYYRGLSG SIVDLVVSGSQEAQKHFGEATNVKSAV
Sequences:
>Translated_347_residues MTSTPHSPSEMFASIPGIFGFYPEESIVVLTLMHTKESCYQLGPVMRLDLKDLRYLSDIGDTLSAIEPDLVFGLIISGQK PEAIEDLRGLIEFVADCEIVPFDACWYTSAIESGGKYDAIWLNEAMTEAALEYQSWRKGRIPLIANTGITGEMIHAGHLP ELSRKDIEKHYAQAEESEQWDEYLITERYAELFDDPSTSFRSAQECIDAFSQAVELMRTEKLITDAALTVAAFLKNKMSR DIIIECCVHNANTVKEALCYVSRHTKGFVRANALALYALCIVDSPWGNHITCVLQAAHNTLPFHHLTALVAEAYYRGLSG SIVDLVVSGSQEAQKHFGEATNVKSAV >Mature_346_residues TSTPHSPSEMFASIPGIFGFYPEESIVVLTLMHTKESCYQLGPVMRLDLKDLRYLSDIGDTLSAIEPDLVFGLIISGQKP EAIEDLRGLIEFVADCEIVPFDACWYTSAIESGGKYDAIWLNEAMTEAALEYQSWRKGRIPLIANTGITGEMIHAGHLPE LSRKDIEKHYAQAEESEQWDEYLITERYAELFDDPSTSFRSAQECIDAFSQAVELMRTEKLITDAALTVAAFLKNKMSRD IIIECCVHNANTVKEALCYVSRHTKGFVRANALALYALCIVDSPWGNHITCVLQAAHNTLPFHHLTALVAEAYYRGLSGS IVDLVVSGSQEAQKHFGEATNVKSAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38536; Mature: 38405
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTPHSPSEMFASIPGIFGFYPEESIVVLTLMHTKESCYQLGPVMRLDLKDLRYLSDIG CCCCCCCHHHHHHHCCCHHCCCCCCCEEEEEEECCHHHHHHHCCCCEECHHHHHHHHHHH DTLSAIEPDLVFGLIISGQKPEAIEDLRGLIEFVADCEIVPFDACWYTSAIESGGKYDAI HHHHHCCHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCCEEEE WLNEAMTEAALEYQSWRKGRIPLIANTGITGEMIHAGHLPELSRKDIEKHYAQAEESEQW EHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH DEYLITERYAELFDDPSTSFRSAQECIDAFSQAVELMRTEKLITDAALTVAAFLKNKMSR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DIIIECCVHNANTVKEALCYVSRHTKGFVRANALALYALCIVDSPWGNHITCVLQAAHNT HHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCC LPFHHLTALVAEAYYRGLSGSIVDLVVSGSQEAQKHFGEATNVKSAV CCHHHHHHHHHHHHHCCCCCCHHHHEECCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure TSTPHSPSEMFASIPGIFGFYPEESIVVLTLMHTKESCYQLGPVMRLDLKDLRYLSDIG CCCCCCHHHHHHHCCCHHCCCCCCCEEEEEEECCHHHHHHHCCCCEECHHHHHHHHHHH DTLSAIEPDLVFGLIISGQKPEAIEDLRGLIEFVADCEIVPFDACWYTSAIESGGKYDAI HHHHHCCHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCCEEEE WLNEAMTEAALEYQSWRKGRIPLIANTGITGEMIHAGHLPELSRKDIEKHYAQAEESEQW EHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH DEYLITERYAELFDDPSTSFRSAQECIDAFSQAVELMRTEKLITDAALTVAAFLKNKMSR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DIIIECCVHNANTVKEALCYVSRHTKGFVRANALALYALCIVDSPWGNHITCVLQAAHNT HHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCC LPFHHLTALVAEAYYRGLSGSIVDLVVSGSQEAQKHFGEATNVKSAV CCHHHHHHHHHHHHHCCCCCCHHHHEECCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA