| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is apt
Identifier: 38233954
GI number: 38233954
Start: 1387088
End: 1387642
Strand: Reverse
Name: apt
Synonym: DIP1369
Alternate gene names: 38233954
Gene position: 1387642-1387088 (Counterclockwise)
Preceding gene: 38233955
Following gene: 38233953
Centisome position: 55.76
GC content: 50.45
Gene sequence:
>555_bases ATGACTGTCCCCCTGTATGCAGATGCCCGAGAAGCAATTGCGTGTAAAACTCGTTTCGTTCCCGATTTCCCTGTACCAGG AGTAATTTTCGAGGACCTCACCCCAGTATTGGCTGATGCCGCCGCTTTTTCTCTCATCGTTGATGAATTGGCAAAAAATG CAATGCGATTGGGAGCTGATTTCATCGGTGGGTTAGACGCACGTGGATTTCTTCTAGGTTCTGCAGTCGCGTACAAAGCC GGAACCGGCATTCTTGCCATTAGGAAAAAGGGCAAATTGCCTCCGCCAGTACACTCTGAGGAATATTCTTTAGAGTATGG CACTGCAGCACTCGAGCTACCTGCTGAAGGTCTAGAGTTGGAAGACAAAAAGGTCGTGCTGGTCGACGACGTTTTGGCTA CTGGCGGCACATTGGATGCGGCTCGCAAATTGATTGAAGCTTGTGGTGCCACTGTAAGCGGATACGCAGTCGTGCTCGAA GTCGACGGGCTGGGTGGCCGTGAGCGATTGAATGATGCACCTTTGGTAGTAATTAATGAAAGCGCTACGGCGTAA
Upstream 100 bases:
>100_bases GGATGGAACATGGATAGGTGGTTCTTTTCTAAGAATTCAAAGTAAGAGCAAATGTACGTTATTTTTGATCAGTATCGATT TCTAGGAAAGAACTGCCTTT
Downstream 100 bases:
>100_bases CTCAAGTTGTTCCGGTACTTTTGGCTAAAAATAGAGTTGGAAAGGCATATTCGCAACGATGACGCAGGATAAGAAAACAG CGAAGCAGTCCAATTCGATG
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTVPLYADAREAIACKTRFVPDFPVPGVIFEDLTPVLADAAAFSLIVDELAKNAMRLGADFIGGLDARGFLLGSAVAYKA GTGILAIRKKGKLPPPVHSEEYSLEYGTAALELPAEGLELEDKKVVLVDDVLATGGTLDAARKLIEACGATVSGYAVVLE VDGLGGRERLNDAPLVVINESATA
Sequences:
>Translated_184_residues MTVPLYADAREAIACKTRFVPDFPVPGVIFEDLTPVLADAAAFSLIVDELAKNAMRLGADFIGGLDARGFLLGSAVAYKA GTGILAIRKKGKLPPPVHSEEYSLEYGTAALELPAEGLELEDKKVVLVDDVLATGGTLDAARKLIEACGATVSGYAVVLE VDGLGGRERLNDAPLVVINESATA >Mature_183_residues TVPLYADAREAIACKTRFVPDFPVPGVIFEDLTPVLADAAAFSLIVDELAKNAMRLGADFIGGLDARGFLLGSAVAYKAG TGILAIRKKGKLPPPVHSEEYSLEYGTAALELPAEGLELEDKKVVLVDDVLATGGTLDAARKLIEACGATVSGYAVVLEV DGLGGRERLNDAPLVVINESATA
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=168, Percent_Identity=44.6428571428571, Blast_Score=131, Evalue=3e-31, Organism=Homo sapiens, GI71773201, Length=128, Percent_Identity=47.65625, Blast_Score=111, Evalue=3e-25, Organism=Escherichia coli, GI1786675, Length=165, Percent_Identity=40.6060606060606, Blast_Score=120, Evalue=8e-29, Organism=Caenorhabditis elegans, GI17509087, Length=180, Percent_Identity=36.6666666666667, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323619, Length=168, Percent_Identity=34.5238095238095, Blast_Score=94, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6320649, Length=173, Percent_Identity=37.5722543352601, Blast_Score=83, Evalue=2e-17, Organism=Drosophila melanogaster, GI17136334, Length=168, Percent_Identity=42.2619047619048, Blast_Score=105, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_CORDI (Q6NGY0)
Other databases:
- EMBL: BX248358 - RefSeq: NP_939721.1 - ProteinModelPortal: Q6NGY0 - SMR: Q6NGY0 - GeneID: 2649900 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP1369 - NMPDR: fig|257309.1.peg.1312 - HOGENOM: HBG703830 - OMA: GILFYDI - PhylomeDB: Q6NGY0 - ProtClustDB: PRK02304 - BioCyc: CDIP257309:DIP1369-MONOMER - BRENDA: 2.4.2.7 - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 19198; Mature: 19067
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPLYADAREAIACKTRFVPDFPVPGVIFEDLTPVLADAAAFSLIVDELAKNAMRLGAD CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH FIGGLDARGFLLGSAVAYKAGTGILAIRKKGKLPPPVHSEEYSLEYGTAALELPAEGLEL HHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCEEEECCCCCCCC EDKKVVLVDDVLATGGTLDAARKLIEACGATVSGYAVVLEVDGLGGRERLNDAPLVVINE CCCEEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCCCCEEEECC SATA CCCC >Mature Secondary Structure TVPLYADAREAIACKTRFVPDFPVPGVIFEDLTPVLADAAAFSLIVDELAKNAMRLGAD CCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH FIGGLDARGFLLGSAVAYKAGTGILAIRKKGKLPPPVHSEEYSLEYGTAALELPAEGLEL HHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCEEEECCCCCCCC EDKKVVLVDDVLATGGTLDAARKLIEACGATVSGYAVVLEVDGLGGRERLNDAPLVVINE CCCEEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCCCCEEEECC SATA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14602910