| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is metK
Identifier: 38233911
GI number: 38233911
Start: 1337610
End: 1338842
Strand: Reverse
Name: metK
Synonym: DIP1325
Alternate gene names: 38233911
Gene position: 1338842-1337610 (Counterclockwise)
Preceding gene: 38233912
Following gene: 38233910
Centisome position: 53.8
GC content: 50.45
Gene sequence:
>1233_bases GTGTCTGAAACTGCTGCCTCCGGCTTGCGTTTGTTTACTAGCGAATCGGTTACCGAGGGGCATCCAGACAAAATCTGCGA TGCGATCTCGGACACCATATTGGATGCCTTGCTGAGCGTTGATCCTCACGCTCGCGTGGCTGTGGAGACTGTCACCACAA CAGGTTTAGTTCACGTCGTGGGAGAAGTTCGTACCTCCGGCTACGTGGAAATTCCAAAATTGGTTCGTGACAAACTAATT GAAATTGGGTTTAACTCTTCTGAGGTTGGCTTCGACGGTCGCACCTGTGGTGTGAGCGTATCCATTGGTGAACAGTCTCA GGAAATTGGTGCTGGTGTTGATCAGTCTCATGAGGTTCGTTCGGGCGAGAATACAGATGCAGATGACCAGGCTGGAGCGG GCGATCAGGGGTTAATGTTCGGCTACGCTACGAACGAGACAGCCACGTTGATGCCTTTGCCTATTGATTTGGCGCATCGA CTTGCTCGTCGCCTGACTCAGGTGCGTAAGACCTCTGTTGTTTCCCATTTGCGTCCTGATGGAAAAACTCAGGTAACACT TGCGTATGACGAATCAGGTCGCCCGGTACGTTTGGATACGGTAGTTGTTTCAACTCAGCATGATCCTGATGTAACCCAGG AATGGCTGTTTGCTCAGATTAAAGAGCATGTTGTTGACTGGGTGCTTCGCGATTCAGGCTTGGAGTCCACACTCGATATC AGCGGTTATTCATTGCTGGTTAATCCATCGGGTTCCTTTGTTGTTGGTGGCCCCATGGGCGATGCTGGGTTGACGGGACG AAAGATCATCGTCGATACCTATGGCGGCATGGCGCGGCATGGTGGCGGTGCGTTCTCTGGAAAAGATCCTAGTAAAGTAG ACCGTTCAGGTGCGTACGCTATGCGTTGGGTTGCTAAGAATATTGTTGCTGCGGGATTGGCTGATCGAGCAGAGGTACAG GTTGCTTATGCGATTGGTCGTGCAAAACCTGTCGGTTTGTATGTCGAAACTTTTGGAACGGCCAAATTTGGTTTGACGGA TGAACAGATTCAAGATGCAGTATTGCACGTGTTCGATCTTCGTCCTGCAGCGATTATTCGAGAGTTGGATCTTCTTCGTC CGATTTATGCTGGTACGGCCGCTTATGGGCATTTCGGACGCGATGATCTGAAGCTGCCTTGGGAAAATACGGATCGAGCA GAACAGTTACGTGACGTGTTGTCTTTAGGCTAA
Upstream 100 bases:
>100_bases TATTGGGTGAAATCAGCTTAAACGGTGAGGTCTTTATTGCGGAAAAGCTTTGTCTGACGGAAGCCGTTTAAATCAATCTT TTTCACTGAAGGGCAATCGA
Downstream 100 bases:
>100_bases ATATGTAGAATCGTTGCCATGTCTAAAACCCGCGTAGCTGCTTCAAGTCTTCCAGTTGCGCGGGTGTTGCCATTACTAGG CGTTGCTCATCTGGATCGCG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSETAASGLRLFTSESVTEGHPDKICDAISDTILDALLSVDPHARVAVETVTTTGLVHVVGEVRTSGYVEIPKLVRDKLI EIGFNSSEVGFDGRTCGVSVSIGEQSQEIGAGVDQSHEVRSGENTDADDQAGAGDQGLMFGYATNETATLMPLPIDLAHR LARRLTQVRKTSVVSHLRPDGKTQVTLAYDESGRPVRLDTVVVSTQHDPDVTQEWLFAQIKEHVVDWVLRDSGLESTLDI SGYSLLVNPSGSFVVGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSGAYAMRWVAKNIVAAGLADRAEVQ VAYAIGRAKPVGLYVETFGTAKFGLTDEQIQDAVLHVFDLRPAAIIRELDLLRPIYAGTAAYGHFGRDDLKLPWENTDRA EQLRDVLSLG
Sequences:
>Translated_410_residues MSETAASGLRLFTSESVTEGHPDKICDAISDTILDALLSVDPHARVAVETVTTTGLVHVVGEVRTSGYVEIPKLVRDKLI EIGFNSSEVGFDGRTCGVSVSIGEQSQEIGAGVDQSHEVRSGENTDADDQAGAGDQGLMFGYATNETATLMPLPIDLAHR LARRLTQVRKTSVVSHLRPDGKTQVTLAYDESGRPVRLDTVVVSTQHDPDVTQEWLFAQIKEHVVDWVLRDSGLESTLDI SGYSLLVNPSGSFVVGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSGAYAMRWVAKNIVAAGLADRAEVQ VAYAIGRAKPVGLYVETFGTAKFGLTDEQIQDAVLHVFDLRPAAIIRELDLLRPIYAGTAAYGHFGRDDLKLPWENTDRA EQLRDVLSLG >Mature_409_residues SETAASGLRLFTSESVTEGHPDKICDAISDTILDALLSVDPHARVAVETVTTTGLVHVVGEVRTSGYVEIPKLVRDKLIE IGFNSSEVGFDGRTCGVSVSIGEQSQEIGAGVDQSHEVRSGENTDADDQAGAGDQGLMFGYATNETATLMPLPIDLAHRL ARRLTQVRKTSVVSHLRPDGKTQVTLAYDESGRPVRLDTVVVSTQHDPDVTQEWLFAQIKEHVVDWVLRDSGLESTLDIS GYSLLVNPSGSFVVGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSGAYAMRWVAKNIVAAGLADRAEVQV AYAIGRAKPVGLYVETFGTAKFGLTDEQIQDAVLHVFDLRPAAIIRELDLLRPIYAGTAAYGHFGRDDLKLPWENTDRAE QLRDVLSLG
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family
Homologues:
Organism=Homo sapiens, GI4557737, Length=393, Percent_Identity=51.1450381679389, Blast_Score=360, Evalue=1e-99, Organism=Homo sapiens, GI5174529, Length=392, Percent_Identity=51.0204081632653, Blast_Score=349, Evalue=3e-96, Organism=Escherichia coli, GI1789311, Length=399, Percent_Identity=56.390977443609, Blast_Score=433, Evalue=1e-123, Organism=Caenorhabditis elegans, GI17538498, Length=401, Percent_Identity=51.8703241895262, Blast_Score=375, Evalue=1e-104, Organism=Caenorhabditis elegans, GI17551082, Length=390, Percent_Identity=53.5897435897436, Blast_Score=372, Evalue=1e-103, Organism=Caenorhabditis elegans, GI17538494, Length=389, Percent_Identity=52.1850899742931, Blast_Score=370, Evalue=1e-103, Organism=Caenorhabditis elegans, GI25145633, Length=399, Percent_Identity=51.6290726817043, Blast_Score=369, Evalue=1e-102, Organism=Caenorhabditis elegans, GI32565905, Length=389, Percent_Identity=48.0719794344473, Blast_Score=317, Evalue=7e-87, Organism=Caenorhabditis elegans, GI32565911, Length=356, Percent_Identity=48.876404494382, Blast_Score=303, Evalue=8e-83, Organism=Caenorhabditis elegans, GI25145635, Length=354, Percent_Identity=48.5875706214689, Blast_Score=297, Evalue=7e-81, Organism=Caenorhabditis elegans, GI32565903, Length=316, Percent_Identity=50.6329113924051, Blast_Score=277, Evalue=6e-75, Organism=Caenorhabditis elegans, GI32565909, Length=83, Percent_Identity=53.0120481927711, Blast_Score=96, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6323209, Length=394, Percent_Identity=53.0456852791878, Blast_Score=374, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6320710, Length=394, Percent_Identity=49.746192893401, Blast_Score=354, Evalue=1e-98, Organism=Drosophila melanogaster, GI45552159, Length=394, Percent_Identity=48.9847715736041, Blast_Score=336, Evalue=2e-92, Organism=Drosophila melanogaster, GI24580529, Length=394, Percent_Identity=48.9847715736041, Blast_Score=336, Evalue=2e-92, Organism=Drosophila melanogaster, GI24580537, Length=394, Percent_Identity=48.9847715736041, Blast_Score=336, Evalue=2e-92, Organism=Drosophila melanogaster, GI24580533, Length=394, Percent_Identity=48.9847715736041, Blast_Score=336, Evalue=2e-92, Organism=Drosophila melanogaster, GI24580535, Length=394, Percent_Identity=48.9847715736041, Blast_Score=336, Evalue=2e-92, Organism=Drosophila melanogaster, GI24580531, Length=394, Percent_Identity=48.9847715736041, Blast_Score=336, Evalue=2e-92, Organism=Drosophila melanogaster, GI24580527, Length=388, Percent_Identity=48.4536082474227, Blast_Score=327, Evalue=7e-90, Organism=Drosophila melanogaster, GI24580525, Length=388, Percent_Identity=48.4536082474227, Blast_Score=327, Evalue=7e-90, Organism=Drosophila melanogaster, GI24580541, Length=368, Percent_Identity=47.554347826087, Blast_Score=306, Evalue=2e-83, Organism=Drosophila melanogaster, GI24580539, Length=136, Percent_Identity=44.8529411764706, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METK_CORDI (P61945)
Other databases:
- EMBL: BX248357 - RefSeq: NP_939678.1 - ProteinModelPortal: P61945 - GeneID: 2649879 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP1325 - NMPDR: fig|257309.1.peg.1269 - HOGENOM: HBG443662 - OMA: IYYAHRL - PhylomeDB: P61945 - ProtClustDB: PRK05250 - BioCyc: CDIP257309:DIP1325-MONOMER - BRENDA: 2.5.1.6 - GO: GO:0005737 - HAMAP: MF_00086 - InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 - PANTHER: PTHR11964 - PIRSF: PIRSF000497 - TIGRFAMs: TIGR01034
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N; SSF55973 S-AdoMet_synt
EC number: =2.5.1.6
Molecular weight: Translated: 44015; Mature: 43884
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00376 ADOMET_SYNTHASE_1; PS00377 ADOMET_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETAASGLRLFTSESVTEGHPDKICDAISDTILDALLSVDPHARVAVETVTTTGLVHVV CCCCHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHH GEVRTSGYVEIPKLVRDKLIEIGFNSSEVGFDGRTCGVSVSIGEQSQEIGAGVDQSHEVR HHHCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCC SGENTDADDQAGAGDQGLMFGYATNETATLMPLPIDLAHRLARRLTQVRKTSVVSHLRPD CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC GKTQVTLAYDESGRPVRLDTVVVSTQHDPDVTQEWLFAQIKEHVVDWVLRDSGLESTLDI CCEEEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC SGYSLLVNPSGSFVVGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSGAYA CCEEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHCCCHHH MRWVAKNIVAAGLADRAEVQVAYAIGRAKPVGLYVETFGTAKFGLTDEQIQDAVLHVFDL HHHHHHHHHHHCCCCCHHEEEEEEECCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHCC RPAAIIRELDLLRPIYAGTAAYGHFGRDDLKLPWENTDRAEQLRDVLSLG CHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SETAASGLRLFTSESVTEGHPDKICDAISDTILDALLSVDPHARVAVETVTTTGLVHVV CCCHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHH GEVRTSGYVEIPKLVRDKLIEIGFNSSEVGFDGRTCGVSVSIGEQSQEIGAGVDQSHEVR HHHCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCC SGENTDADDQAGAGDQGLMFGYATNETATLMPLPIDLAHRLARRLTQVRKTSVVSHLRPD CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC GKTQVTLAYDESGRPVRLDTVVVSTQHDPDVTQEWLFAQIKEHVVDWVLRDSGLESTLDI CCEEEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC SGYSLLVNPSGSFVVGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSGAYA CCEEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHCCCHHH MRWVAKNIVAAGLADRAEVQVAYAIGRAKPVGLYVETFGTAKFGLTDEQIQDAVLHVFDL HHHHHHHHHHHCCCCCHHEEEEEEECCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHCC RPAAIIRELDLLRPIYAGTAAYGHFGRDDLKLPWENTDRAEQLRDVLSLG CHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14602910