| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is 38233891
Identifier: 38233891
GI number: 38233891
Start: 1316693
End: 1317652
Strand: Direct
Name: 38233891
Synonym: DIP1305
Alternate gene names: NA
Gene position: 1316693-1317652 (Clockwise)
Preceding gene: 38233890
Following gene: 38233892
Centisome position: 52.91
GC content: 51.25
Gene sequence:
>960_bases GTGATTTTTACACTGCCAAATACCACTACACAGGAAATCGCCAAGACTCTGGTAAAAATTCGTGACACAGGAGGTCAGGT AACCACCAGCCGGGTACTTACTCTCATTGTTGTAGCTCGAGACACCAGCGATGTCGAAGGCATTATTCGAGCTACTAATG AAGCCTCTCAAGAGCATCCCTCACGTGTAATCATTTTGGTCGCCGGCTCGCACGAAGGCGAGTCCCAAGTTGATGCAGAG GTACGCATTGGTGGCGACGCCGGCGCCTCTGAGATGATTCTCATCAAATTAGCAGGGCGCGTCGCAAAGCACCTTGTGCA TGTCGTTACTCCGCTGCTACTCCCTGATACCCCTATCGTGGCATGGTGGCCCTCTTCTGCTCCGATCAATCCAGCCGAGG ATCCCATCGGTAAAATTGCACAGCGTCGTATTACAGATTCACACTTTGATCCACCAGTAGACGCTTTGTATAATCGCCGG AATCACTACGCTCCTGGAGATTCCGATTTTTCATGGGCCCGATTAACTCCTTGGCGCGGAGTTCTCGCTTCAAGTTTGGA TCAAGCTCCATATGAAATGGTCCAAGACGTTCGAGTTTATGGCGAATCCGATTGTCCCAGTGTCGACCTCGCTGCAGGCT GGCTATGCGAGCGGCTCGGAATCTCTGTCGAACGGCATAATTACGGTTCTGGTTCAGCAGCTTTTGATGATGCCGGACTA GCAAAAATACCGGTTAAACGAATCGAGCTAGAGCGCCCTTCTGGTTGCGTTGTTATCGAAGCCCTTGACGACGACCAAAC ACTTTCAGTTAGCATCCCTGGCCGGTCGACAGCACATGTGGCAGTGACACGACGTAGTCAAGCTGATTGTTTGGCGGAAG AATTGCGCCATCTCGACCCAGATATCGCTTATGCTCGAGCACTTCGCGGTCTGAGTAGAGTGTCCTATCCTACTCAATAA
Upstream 100 bases:
>100_bases CCCCGCTGGCACCTGGGGCCCAGCTGGTGCAGACAAGATGCTGGAGCGCGAAGGTCGCGCTTGGCGTCGACCTTAACGAG CGAGGAAGCTGAGATACGCC
Downstream 100 bases:
>100_bases AATTTTCGAAAGATGAAGCACTTTTATGGTTGAAGTTATTCGAGTATCAGACCTCGACGCAGTTATTCAGGAAGCCCATC GCAGATTCCTCCAGGTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: Oxppcycle Protein; Glucose-6-Phosphate Dehydrogenase Subunit; Oxppcycle Protein OpcA; OxPP Cycle Protein OpcA; Glucose-6-Phosphate Dehydrogenase Assembly Protein OpcA; Glucose-6-P Dehydrogenase Subunit; Oxpp Cycle Protein OpcA; Glucose-6-P Dehydrogenase Subunit-Like Protein; Glucose-6-Phosphate Dehydrogenase Opca Subunit; Gucose-6-Phosphate Dehydrogenase Assembly Protein OpcA; OXPP Cycle Protein OpcA; OxpP Cycle Protein OpcA; 6-Phosphogluconolactonase; Glucose 6-Phosphate Dehydrogenase Effector OpcA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MIFTLPNTTTQEIAKTLVKIRDTGGQVTTSRVLTLIVVARDTSDVEGIIRATNEASQEHPSRVIILVAGSHEGESQVDAE VRIGGDAGASEMILIKLAGRVAKHLVHVVTPLLLPDTPIVAWWPSSAPINPAEDPIGKIAQRRITDSHFDPPVDALYNRR NHYAPGDSDFSWARLTPWRGVLASSLDQAPYEMVQDVRVYGESDCPSVDLAAGWLCERLGISVERHNYGSGSAAFDDAGL AKIPVKRIELERPSGCVVIEALDDDQTLSVSIPGRSTAHVAVTRRSQADCLAEELRHLDPDIAYARALRGLSRVSYPTQ
Sequences:
>Translated_319_residues MIFTLPNTTTQEIAKTLVKIRDTGGQVTTSRVLTLIVVARDTSDVEGIIRATNEASQEHPSRVIILVAGSHEGESQVDAE VRIGGDAGASEMILIKLAGRVAKHLVHVVTPLLLPDTPIVAWWPSSAPINPAEDPIGKIAQRRITDSHFDPPVDALYNRR NHYAPGDSDFSWARLTPWRGVLASSLDQAPYEMVQDVRVYGESDCPSVDLAAGWLCERLGISVERHNYGSGSAAFDDAGL AKIPVKRIELERPSGCVVIEALDDDQTLSVSIPGRSTAHVAVTRRSQADCLAEELRHLDPDIAYARALRGLSRVSYPTQ >Mature_319_residues MIFTLPNTTTQEIAKTLVKIRDTGGQVTTSRVLTLIVVARDTSDVEGIIRATNEASQEHPSRVIILVAGSHEGESQVDAE VRIGGDAGASEMILIKLAGRVAKHLVHVVTPLLLPDTPIVAWWPSSAPINPAEDPIGKIAQRRITDSHFDPPVDALYNRR NHYAPGDSDFSWARLTPWRGVLASSLDQAPYEMVQDVRVYGESDCPSVDLAAGWLCERLGISVERHNYGSGSAAFDDAGL AKIPVKRIELERPSGCVVIEALDDDQTLSVSIPGRSTAHVAVTRRSQADCLAEELRHLDPDIAYARALRGLSRVSYPTQ
Specific function: Unknown
COG id: COG3429
COG function: function code G; Glucose-6-P dehydrogenase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34665; Mature: 34665
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFTLPNTTTQEIAKTLVKIRDTGGQVTTSRVLTLIVVARDTSDVEGIIRATNEASQEHP CEEECCCCCHHHHHHHHHHHHCCCCCEEHHEEEEEEEEECCCCCHHHHHHHCCHHHHCCC SRVIILVAGSHEGESQVDAEVRIGGDAGASEMILIKLAGRVAKHLVHVVTPLLLPDTPIV CEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEE AWWPSSAPINPAEDPIGKIAQRRITDSHFDPPVDALYNRRNHYAPGDSDFSWARLTPWRG EECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCHHH VLASSLDQAPYEMVQDVRVYGESDCPSVDLAAGWLCERLGISVERHNYGSGSAAFDDAGL HHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC AKIPVKRIELERPSGCVVIEALDDDQTLSVSIPGRSTAHVAVTRRSQADCLAEELRHLDP CCCCHHHEEECCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCC DIAYARALRGLSRVSYPTQ HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIFTLPNTTTQEIAKTLVKIRDTGGQVTTSRVLTLIVVARDTSDVEGIIRATNEASQEHP CEEECCCCCHHHHHHHHHHHHCCCCCEEHHEEEEEEEEECCCCCHHHHHHHCCHHHHCCC SRVIILVAGSHEGESQVDAEVRIGGDAGASEMILIKLAGRVAKHLVHVVTPLLLPDTPIV CEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEE AWWPSSAPINPAEDPIGKIAQRRITDSHFDPPVDALYNRRNHYAPGDSDFSWARLTPWRG EECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCHHH VLASSLDQAPYEMVQDVRVYGESDCPSVDLAAGWLCERLGISVERHNYGSGSAAFDDAGL HHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC AKIPVKRIELERPSGCVVIEALDDDQTLSVSIPGRSTAHVAVTRRSQADCLAEELRHLDP CCCCHHHEEECCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCC DIAYARALRGLSRVSYPTQ HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA