| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is tal [H]
Identifier: 38233889
GI number: 38233889
Start: 1313875
End: 1314957
Strand: Direct
Name: tal [H]
Synonym: DIP1303
Alternate gene names: 38233889
Gene position: 1313875-1314957 (Clockwise)
Preceding gene: 38233888
Following gene: 38233890
Centisome position: 52.8
GC content: 47.92
Gene sequence:
>1083_bases ATGACCGCAATTGACCAACTCAAAAATGTGGGCACTTCCACTTGGCTTGATGACTTATCTCGTGATCGTCTTCAATCCGG CAACCTCGCCGAACTTATCAAGAGTAAATCTATCGTTGGCGTTACGACGAACCCAGCAATCTTTGCAGCTGCTATGAGCA AAGGAACTGCATATGATTCCCAAATTGAAAAGCTAAAGGCCGCTCAAGCCGATGCTGATTCCGCTGTCTACGCCATGAGC ATCGACGATGTGCGCGCAGCTTGCGACGTTTTTTCTGAAATCTACGCCGAATCTGAAGGCAAAGATGGCCGCGTAAGTAT TGAAGTCGATCCTCGAATCTCCGAAGATCGAGATGCCACGATCTCCCAAGCTCGTGAATTGTGGAACAAAGTAAATCGAC CGAATGTCATGATCAAGATCCCCGCTACTCGAGGATCATTGCCAGCAATCACTGATGCATTGGCAGAAGGTATAAGCGTT AACGTAACCCTCATTTTTTCAGTAGCACGCTACCGTGAAGTCATCGCTGCGTACATTGAAGGTATCAAAAAAGCAGCAGA AAACGGGCTTAACGTATCTCAAATTCATTCAGTCGCATCGTTCTTTGTGTCGCGTTTGGACACCGAAGTGGACAAACGTC TGGAACAAATTGGTAGTGACGAAGCACTTTCACTGCGTGGGAAAGCAGGTGTGGCGAATGCTCAACGCGCTTACGCTGTC TTCCTTGAAGCATTCCAAGCTGCAGATCTACCTGTAGGAGCTCATGTTCAACGTCCTTTGTGGGCTTCCACTGGCGTAAA AAACCCAGATTATTCGCCCACGTTCTATGTTTCTGAACTCGCTGGCCCAGACACCGTCAATACGATGCCGGAATCTACCA TCGACGCTGTGCTAGCCGCAGATGATATTCATGGTGACACGCTTAGTTCCAGCAGCGATTCGGCAAATGAAATATTTACA CGCATTTCTCAAACCGGCATTGATTTTGAAGATGTGTTCGCTGTGCTGGAGCAAGAGGGCGTCGATAAGTTCGTAGCGGC ATGGAGCGATCTTCTTGATTCGATGGAATCTCGCTTGAAGTAA
Upstream 100 bases:
>100_bases AACGCAGGTTGTTGGTCCGCTTATGTTGCTGCACCACTAACCTGCGTTTGTTGTTCTTTAGGAAATCACAACCATCAATA TTCGACTGAAAAGGTTTATA
Downstream 100 bases:
>100_bases TACAGTTTCAGCATAAAAATAATCGCGTTGGGTTCTGAGAACCACCTTCGAGAGGGTAAACTTGCCCAACGTGAGTAAAC CAGTGGCTAACGGAAACACC
Product: transaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTAIDQLKNVGTSTWLDDLSRDRLQSGNLAELIKSKSIVGVTTNPAIFAAAMSKGTAYDSQIEKLKAAQADADSAVYAMS IDDVRAACDVFSEIYAESEGKDGRVSIEVDPRISEDRDATISQARELWNKVNRPNVMIKIPATRGSLPAITDALAEGISV NVTLIFSVARYREVIAAYIEGIKKAAENGLNVSQIHSVASFFVSRLDTEVDKRLEQIGSDEALSLRGKAGVANAQRAYAV FLEAFQAADLPVGAHVQRPLWASTGVKNPDYSPTFYVSELAGPDTVNTMPESTIDAVLAADDIHGDTLSSSSDSANEIFT RISQTGIDFEDVFAVLEQEGVDKFVAAWSDLLDSMESRLK
Sequences:
>Translated_360_residues MTAIDQLKNVGTSTWLDDLSRDRLQSGNLAELIKSKSIVGVTTNPAIFAAAMSKGTAYDSQIEKLKAAQADADSAVYAMS IDDVRAACDVFSEIYAESEGKDGRVSIEVDPRISEDRDATISQARELWNKVNRPNVMIKIPATRGSLPAITDALAEGISV NVTLIFSVARYREVIAAYIEGIKKAAENGLNVSQIHSVASFFVSRLDTEVDKRLEQIGSDEALSLRGKAGVANAQRAYAV FLEAFQAADLPVGAHVQRPLWASTGVKNPDYSPTFYVSELAGPDTVNTMPESTIDAVLAADDIHGDTLSSSSDSANEIFT RISQTGIDFEDVFAVLEQEGVDKFVAAWSDLLDSMESRLK >Mature_359_residues TAIDQLKNVGTSTWLDDLSRDRLQSGNLAELIKSKSIVGVTTNPAIFAAAMSKGTAYDSQIEKLKAAQADADSAVYAMSI DDVRAACDVFSEIYAESEGKDGRVSIEVDPRISEDRDATISQARELWNKVNRPNVMIKIPATRGSLPAITDALAEGISVN VTLIFSVARYREVIAAYIEGIKKAAENGLNVSQIHSVASFFVSRLDTEVDKRLEQIGSDEALSLRGKAGVANAQRAYAVF LEAFQAADLPVGAHVQRPLWASTGVKNPDYSPTFYVSELAGPDTVNTMPESTIDAVLAADDIHGDTLSSSSDSANEIFTR ISQTGIDFEDVFAVLEQEGVDKFVAAWSDLLDSMESRLK
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004732 - InterPro: IPR018225 - InterPro: IPR014634 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 38851; Mature: 38720
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS01054 TRANSALDOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIDQLKNVGTSTWLDDLSRDRLQSGNLAELIKSKSIVGVTTNPAIFAAAMSKGTAYDS CCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCHHHHHHHHCCCCHHH QIEKLKAAQADADSAVYAMSIDDVRAACDVFSEIYAESEGKDGRVSIEVDPRISEDRDAT HHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHH ISQARELWNKVNRPNVMIKIPATRGSLPAITDALAEGISVNVTLIFSVARYREVIAAYIE HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH GIKKAAENGLNVSQIHSVASFFVSRLDTEVDKRLEQIGSDEALSLRGKAGVANAQRAYAV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHH FLEAFQAADLPVGAHVQRPLWASTGVKNPDYSPTFYVSELAGPDTVNTMPESTIDAVLAA HHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHH DDIHGDTLSSSSDSANEIFTRISQTGIDFEDVFAVLEQEGVDKFVAAWSDLLDSMESRLK CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAIDQLKNVGTSTWLDDLSRDRLQSGNLAELIKSKSIVGVTTNPAIFAAAMSKGTAYDS CHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCHHHHHHHHCCCCHHH QIEKLKAAQADADSAVYAMSIDDVRAACDVFSEIYAESEGKDGRVSIEVDPRISEDRDAT HHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHH ISQARELWNKVNRPNVMIKIPATRGSLPAITDALAEGISVNVTLIFSVARYREVIAAYIE HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH GIKKAAENGLNVSQIHSVASFFVSRLDTEVDKRLEQIGSDEALSLRGKAGVANAQRAYAV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHH FLEAFQAADLPVGAHVQRPLWASTGVKNPDYSPTFYVSELAGPDTVNTMPESTIDAVLAA HHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHH DDIHGDTLSSSSDSANEIFTRISQTGIDFEDVFAVLEQEGVDKFVAAWSDLLDSMESRLK CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA