| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233863
Identifier: 38233863
GI number: 38233863
Start: 1285420
End: 1286262
Strand: Reverse
Name: 38233863
Synonym: DIP1278
Alternate gene names: NA
Gene position: 1286262-1285420 (Counterclockwise)
Preceding gene: 38233865
Following gene: 38233862
Centisome position: 51.69
GC content: 46.86
Gene sequence:
>843_bases ATGACTTTCCATGATCCATATGCCGGCAACATTCTAAAAGGACATTCTCGAAATGTTCCGCAACAATTTCCTGAAGTCCC AGCGAAACCTGGTTTGGTGGTCGAGGTACTAGCCGATGGTTTTGTTGGTGCAGTTATTAATTTTGAACGAACTTACGACG GAGATTTCATTCGACTTGAAGATCGCTATCAACATGAGCGCCTTTTTAAGCTGAGAAAAGGAGCGTTCCTCATTGACGGG AATCGGGTTACGCTTACGCGTTTCGTGGAAAAGAAACAGCCCGAACGATCAAATTCAGGTTCCCGAAAAGTAAAACACGT TGAAGCGAAAGTTGCGGCACCATCGCGGATCTGGGTTGAAGGTATTCATGATGCAGCAATCGTTGAAAAAATATGGGGTC ATGATCTGCGAGTTGAAGGCGTAGTGGTGGAATATCTGGAAGGACTTGATAATCTTCCGCATCAGTTAGCCCAGTTTAAG CCTCAACTAGGACGGCGAGTCGGAGTATTAGCAGACCACCTGGTAGAAGGATCCAAAGAAACAAAGCTGACCGAAAGCGT CGGGCCAGATGTTCTCGTGACGGGCCATCCCTATATTGACATTTGGGCCGCAGTAAAACCTGAAAGACTAGGTTTGCGAG AATGGCCAAAAGTTCCATACGGCGAGGATTGGAAAATGGGCATCTGCCGCCGAGTTGGCTGGGCTGATCCAAAAGAAGGC TGGAATCGTGTATACAATGCCGTGCATTCATTCCGAGACGTCGATTCCACTTTAATTGGGGCAGTTGAGCGACTGGTTGA TTTTGTTACAACCCCAGAGCTAAAGAAAGAAGACCTTTTGTAA
Upstream 100 bases:
>100_bases AGCCATGCGCCTATCCAAAGACTAGCGTTTTGCAATGGACTGTAGAGATTGTCGCGGATATTCATAGCTTTAAAGACCTT AGCGGATAGGCTGTGGTGTT
Downstream 100 bases:
>100_bases CACGCCTCGCTCATATTAGGGATGAGGTTTCTACGCGACGATTTGGTTTTCAGTAAGCTAGATGCTGTGGGATCTTTGGA ATGGTTTGTAATAAGTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTFHDPYAGNILKGHSRNVPQQFPEVPAKPGLVVEVLADGFVGAVINFERTYDGDFIRLEDRYQHERLFKLRKGAFLIDG NRVTLTRFVEKKQPERSNSGSRKVKHVEAKVAAPSRIWVEGIHDAAIVEKIWGHDLRVEGVVVEYLEGLDNLPHQLAQFK PQLGRRVGVLADHLVEGSKETKLTESVGPDVLVTGHPYIDIWAAVKPERLGLREWPKVPYGEDWKMGICRRVGWADPKEG WNRVYNAVHSFRDVDSTLIGAVERLVDFVTTPELKKEDLL
Sequences:
>Translated_280_residues MTFHDPYAGNILKGHSRNVPQQFPEVPAKPGLVVEVLADGFVGAVINFERTYDGDFIRLEDRYQHERLFKLRKGAFLIDG NRVTLTRFVEKKQPERSNSGSRKVKHVEAKVAAPSRIWVEGIHDAAIVEKIWGHDLRVEGVVVEYLEGLDNLPHQLAQFK PQLGRRVGVLADHLVEGSKETKLTESVGPDVLVTGHPYIDIWAAVKPERLGLREWPKVPYGEDWKMGICRRVGWADPKEG WNRVYNAVHSFRDVDSTLIGAVERLVDFVTTPELKKEDLL >Mature_279_residues TFHDPYAGNILKGHSRNVPQQFPEVPAKPGLVVEVLADGFVGAVINFERTYDGDFIRLEDRYQHERLFKLRKGAFLIDGN RVTLTRFVEKKQPERSNSGSRKVKHVEAKVAAPSRIWVEGIHDAAIVEKIWGHDLRVEGVVVEYLEGLDNLPHQLAQFKP QLGRRVGVLADHLVEGSKETKLTESVGPDVLVTGHPYIDIWAAVKPERLGLREWPKVPYGEDWKMGICRRVGWADPKEGW NRVYNAVHSFRDVDSTLIGAVERLVDFVTTPELKKEDLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31771; Mature: 31639
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFHDPYAGNILKGHSRNVPQQFPEVPAKPGLVVEVLADGFVGAVINFERTYDGDFIRLE CCCCCCCCCCEECCCCCCCCHHHHCCCCCCCEEHHHHHCCCEEHEEEECCCCCCCEEEEH DRYQHERLFKLRKGAFLIDGNRVTLTRFVEKKQPERSNSGSRKVKHVEAKVAAPSRIWVE HHHHHHHHHHHHCCCEEEECCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHH GIHDAAIVEKIWGHDLRVEGVVVEYLEGLDNLPHQLAQFKPQLGRRVGVLADHLVEGSKE CCHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TKLTESVGPDVLVTGHPYIDIWAAVKPERLGLREWPKVPYGEDWKMGICRRVGWADPKEG HHHHHHCCCCEEEECCCCEEEEECCCHHHCCHHHCCCCCCCCCCHHHHHHHCCCCCHHHH WNRVYNAVHSFRDVDSTLIGAVERLVDFVTTPELKKEDLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC >Mature Secondary Structure TFHDPYAGNILKGHSRNVPQQFPEVPAKPGLVVEVLADGFVGAVINFERTYDGDFIRLE CCCCCCCCCEECCCCCCCCHHHHCCCCCCCEEHHHHHCCCEEHEEEECCCCCCCEEEEH DRYQHERLFKLRKGAFLIDGNRVTLTRFVEKKQPERSNSGSRKVKHVEAKVAAPSRIWVE HHHHHHHHHHHHCCCEEEECCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHH GIHDAAIVEKIWGHDLRVEGVVVEYLEGLDNLPHQLAQFKPQLGRRVGVLADHLVEGSKE CCHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TKLTESVGPDVLVTGHPYIDIWAAVKPERLGLREWPKVPYGEDWKMGICRRVGWADPKEG HHHHHHCCCCEEEECCCCEEEEECCCHHHCCHHHCCCCCCCCCCHHHHHHHCCCCCHHHH WNRVYNAVHSFRDVDSTLIGAVERLVDFVTTPELKKEDLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA